EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004818 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 3249 bases
Position: chrJH127374.1:140212-143460
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005414	RVT_1	PF00078.27	8.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005462	-	2985	-	ENSLACP00000005414	995 (aa)	-	H3A6Z3

Gene Model

Click here to download ENSLACG00000004818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004818	-	50	31.378	ENSLACG00000006151	-	69	31.378
ENSLACG00000004818	-	100	78.800	ENSLACG00000004854	-	91	78.800
ENSLACG00000004818	-	97	77.368	ENSLACG00000002417	-	93	77.368
ENSLACG00000004818	-	100	75.913	ENSLACG00000001833	-	89	75.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004818	-	79	30.207	ENSAPEG00000014936	-	83	30.207	Amphiprion_percula
ENSLACG00000004818	-	63	33.029	ENSAPEG00000014949	-	94	33.029	Amphiprion_percula
ENSLACG00000004818	-	88	30.753	ENSATEG00000019692	-	82	30.753	Anabas_testudineus
ENSLACG00000004818	-	55	35.106	ENSACLG00000001380	-	95	35.106	Astatotilapia_calliptera
ENSLACG00000004818	-	96	30.639	ENSACLG00000004561	-	95	30.639	Astatotilapia_calliptera
ENSLACG00000004818	-	58	30.486	ENSACLG00000007712	-	99	30.486	Astatotilapia_calliptera
ENSLACG00000004818	-	55	32.110	ENSAMXG00000039473	-	52	32.110	Astyanax_mexicanus
ENSLACG00000004818	-	67	30.632	ENSCVAG00000019870	-	94	30.632	Cyprinodon_variegatus
ENSLACG00000004818	-	68	31.638	ENSELUG00000022230	-	86	31.638	Esox_lucius
ENSLACG00000004818	-	61	30.615	ENSGAGG00000007173	-	100	30.615	Gopherus_agassizii
ENSLACG00000004818	-	54	33.453	ENSHCOG00000019997	-	99	33.453	Hippocampus_comes
ENSLACG00000004818	-	77	31.488	ENSKMAG00000013568	-	99	31.488	Kryptolebias_marmoratus
ENSLACG00000004818	-	100	30.537	ENSORLG00000027590	-	77	30.537	Oryzias_latipes
ENSLACG00000004818	-	71	32.586	ENSORLG00000028879	-	80	32.586	Oryzias_latipes
ENSLACG00000004818	-	99	39.408	ENSORLG00000023375	-	77	39.408	Oryzias_latipes
ENSLACG00000004818	-	56	30.729	ENSORLG00000027443	-	97	30.729	Oryzias_latipes
ENSLACG00000004818	-	80	32.892	ENSORLG00000026235	-	86	32.892	Oryzias_latipes
ENSLACG00000004818	-	50	31.380	ENSORLG00000023794	-	96	31.380	Oryzias_latipes
ENSLACG00000004818	-	53	30.602	ENSORLG00000024878	-	59	30.602	Oryzias_latipes
ENSLACG00000004818	-	99	45.758	ENSORLG00000028233	-	77	46.139	Oryzias_latipes
ENSLACG00000004818	-	99	45.758	ENSORLG00000026053	-	77	46.139	Oryzias_latipes
ENSLACG00000004818	-	59	32.803	ENSORLG00020000592	-	74	32.803	Oryzias_latipes_hni
ENSLACG00000004818	-	58	33.655	ENSORLG00020002002	-	95	33.655	Oryzias_latipes_hni
ENSLACG00000004818	-	50	34.241	ENSORLG00020009127	-	99	34.241	Oryzias_latipes_hni
ENSLACG00000004818	-	76	31.915	ENSORLG00020019030	-	94	31.915	Oryzias_latipes_hni
ENSLACG00000004818	-	61	33.075	ENSORLG00020009084	-	87	33.075	Oryzias_latipes_hni
ENSLACG00000004818	-	99	39.293	ENSORLG00020014981	-	77	39.293	Oryzias_latipes_hni
ENSLACG00000004818	-	78	45.062	ENSORLG00020009401	-	78	45.556	Oryzias_latipes_hni
ENSLACG00000004818	-	99	39.293	ENSORLG00020012971	-	83	39.293	Oryzias_latipes_hni
ENSLACG00000004818	-	91	32.322	ENSORLG00020021465	-	75	32.322	Oryzias_latipes_hni
ENSLACG00000004818	-	56	31.415	ENSORLG00020017608	-	57	31.415	Oryzias_latipes_hni
ENSLACG00000004818	-	79	32.542	ENSORLG00015003846	-	86	32.542	Oryzias_latipes_hsok
ENSLACG00000004818	-	54	33.860	ENSORLG00015010510	-	92	33.860	Oryzias_latipes_hsok
ENSLACG00000004818	-	66	30.603	ENSORLG00015022353	-	75	30.603	Oryzias_latipes_hsok
ENSLACG00000004818	-	79	31.318	ENSORLG00015022314	-	92	31.318	Oryzias_latipes_hsok
ENSLACG00000004818	-	55	31.606	ENSORLG00015022127	-	74	31.606	Oryzias_latipes_hsok
ENSLACG00000004818	-	58	32.280	ENSOMEG00000013437	-	99	32.280	Oryzias_melastigma
ENSLACG00000004818	-	57	31.919	ENSOMEG00000013073	-	95	31.919	Oryzias_melastigma
ENSLACG00000004818	-	88	30.109	ENSOMEG00000017295	-	87	30.109	Oryzias_melastigma
ENSLACG00000004818	-	52	30.120	ENSOMEG00000000573	-	50	30.120	Oryzias_melastigma
ENSLACG00000004818	-	69	31.429	ENSOMEG00000005634	-	97	31.429	Oryzias_melastigma
ENSLACG00000004818	-	54	33.738	ENSPKIG00000015048	-	79	33.738	Paramormyrops_kingsleyae
ENSLACG00000004818	-	61	30.108	ENSPKIG00000013293	-	57	30.108	Paramormyrops_kingsleyae
ENSLACG00000004818	-	75	33.250	ENSPKIG00000006845	-	80	33.250	Paramormyrops_kingsleyae
ENSLACG00000004818	-	58	31.796	ENSPKIG00000005406	-	98	31.796	Paramormyrops_kingsleyae
ENSLACG00000004818	-	100	31.244	ENSPKIG00000016590	-	77	31.244	Paramormyrops_kingsleyae
ENSLACG00000004818	-	58	33.483	ENSPREG00000006052	-	56	33.483	Poecilia_reticulata
ENSLACG00000004818	-	59	31.475	ENSSPAG00000008169	-	93	31.475	Stegastes_partitus
ENSLACG00000004818	-	61	31.765	ENSTNIG00000006817	-	56	31.765	Tetraodon_nigroviridis
ENSLACG00000004818	-	60	31.435	ENSXMAG00000029360	-	65	31.435	Xiphophorus_maculatus
ENSLACG00000004818	-	60	31.435	ENSXMAG00000023370	-	58	31.435	Xiphophorus_maculatus
ENSLACG00000004818	-	54	34.099	ENSXMAG00000025957	-	99	34.099	Xiphophorus_maculatus