EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 3401 bases
Position: chrJH128506.1:141549-144949
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005457	RVT_1	PF00078.27	3.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005505	-	3270	-	ENSLACP00000005457	1090 (aa)	-	H3A736

Gene Model

Click here to download ENSLACG00000004854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004854	-	54	31.818	ENSLACG00000006151	-	76	31.818
ENSLACG00000004854	-	89	77.183	ENSLACG00000002417	-	93	77.183
ENSLACG00000004854	-	97	73.339	ENSLACG00000001833	-	95	73.339
ENSLACG00000004854	-	91	78.800	ENSLACG00000004818	-	100	78.800

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004854	-	64	30.426	ENSAPOG00000022647	-	52	30.426	Acanthochromis_polyacanthus
ENSLACG00000004854	-	67	32.420	ENSAPOG00000005387	-	53	32.420	Acanthochromis_polyacanthus
ENSLACG00000004854	-	60	33.631	ENSAPEG00000014949	-	97	33.631	Amphiprion_percula
ENSLACG00000004854	-	58	32.603	ENSAPEG00000002424	-	50	32.603	Amphiprion_percula
ENSLACG00000004854	-	74	30.419	ENSAPEG00000014936	-	84	30.419	Amphiprion_percula
ENSLACG00000004854	-	89	30.172	ENSATEG00000019692	-	91	30.172	Anabas_testudineus
ENSLACG00000004854	-	51	34.737	ENSACLG00000001380	-	95	34.737	Astatotilapia_calliptera
ENSLACG00000004854	-	64	31.702	ENSACLG00000003361	-	53	31.702	Astatotilapia_calliptera
ENSLACG00000004854	-	92	30.630	ENSACLG00000004561	-	99	30.630	Astatotilapia_calliptera
ENSLACG00000004854	-	64	31.489	ENSACLG00000013455	-	53	31.489	Astatotilapia_calliptera
ENSLACG00000004854	-	52	30.874	ENSACLG00000000373	-	57	30.874	Astatotilapia_calliptera
ENSLACG00000004854	-	55	32.110	ENSACLG00000013947	-	61	32.110	Astatotilapia_calliptera
ENSLACG00000004854	-	64	31.070	ENSACLG00000003852	-	56	31.070	Astatotilapia_calliptera
ENSLACG00000004854	-	63	31.064	ENSACLG00000010542	-	59	31.064	Astatotilapia_calliptera
ENSLACG00000004854	-	53	31.000	ENSACLG00000007712	-	99	31.000	Astatotilapia_calliptera
ENSLACG00000004854	-	52	30.874	ENSACLG00000012657	-	57	30.874	Astatotilapia_calliptera
ENSLACG00000004854	-	55	30.851	ENSACLG00000018344	-	54	30.851	Astatotilapia_calliptera
ENSLACG00000004854	-	52	30.275	ENSAMXG00000034382	-	52	30.963	Astyanax_mexicanus
ENSLACG00000004854	-	54	31.906	ENSAMXG00000039473	-	58	31.906	Astyanax_mexicanus
ENSLACG00000004854	-	59	31.155	ENSAMXG00000030022	-	57	31.155	Astyanax_mexicanus
ENSLACG00000004854	-	56	32.737	ENSAMXG00000036113	-	61	32.737	Astyanax_mexicanus
ENSLACG00000004854	-	62	31.712	ENSAMXG00000032783	-	55	31.712	Astyanax_mexicanus
ENSLACG00000004854	-	56	31.633	ENSAMXG00000039110	-	50	31.633	Astyanax_mexicanus
ENSLACG00000004854	-	62	31.064	ENSCVAG00000019870	-	93	31.064	Cyprinodon_variegatus
ENSLACG00000004854	-	62	31.232	ENSELUG00000022230	-	86	31.232	Esox_lucius
ENSLACG00000004854	-	64	31.290	ENSGAFG00000016760	-	52	31.290	Gambusia_affinis
ENSLACG00000004854	-	53	30.657	ENSGAFG00000016352	-	51	30.657	Gambusia_affinis
ENSLACG00000004854	-	57	32.248	ENSGAGG00000007173	-	100	32.248	Gopherus_agassizii
ENSLACG00000004854	-	72	30.667	ENSGAGG00000022002	-	96	30.667	Gopherus_agassizii
ENSLACG00000004854	-	62	31.788	ENSKMAG00000012706	-	50	31.788	Kryptolebias_marmoratus
ENSLACG00000004854	-	71	30.511	ENSKMAG00000013568	-	98	30.511	Kryptolebias_marmoratus
ENSLACG00000004854	-	54	31.442	ENSMAMG00000019918	-	99	31.442	Mastacembelus_armatus
ENSLACG00000004854	-	59	32.381	ENSMALG00000020759	-	54	32.381	Monopterus_albus
ENSLACG00000004854	-	100	46.829	ENSORLG00000028233	-	85	46.829	Oryzias_latipes
ENSLACG00000004854	-	73	34.345	ENSORLG00000026235	-	86	34.345	Oryzias_latipes
ENSLACG00000004854	-	99	30.052	ENSORLG00000028266	-	84	30.148	Oryzias_latipes
ENSLACG00000004854	-	52	31.231	ENSORLG00000029184	-	80	31.231	Oryzias_latipes
ENSLACG00000004854	-	100	46.655	ENSORLG00000026053	-	85	46.655	Oryzias_latipes
ENSLACG00000004854	-	51	32.343	ENSORLG00000027443	-	97	32.343	Oryzias_latipes
ENSLACG00000004854	-	71	33.130	ENSORLG00000028879	-	88	33.130	Oryzias_latipes
ENSLACG00000004854	-	62	32.128	ENSORLG00000028051	-	55	32.128	Oryzias_latipes
ENSLACG00000004854	-	100	39.947	ENSORLG00000023375	-	85	39.947	Oryzias_latipes
ENSLACG00000004854	-	69	30.991	ENSORLG00020019030	-	94	30.991	Oryzias_latipes_hni
ENSLACG00000004854	-	91	33.728	ENSORLG00020021465	-	82	33.728	Oryzias_latipes_hni
ENSLACG00000004854	-	62	32.280	ENSORLG00020000592	-	87	32.280	Oryzias_latipes_hni
ENSLACG00000004854	-	58	31.064	ENSORLG00020017608	-	65	31.064	Oryzias_latipes_hni
ENSLACG00000004854	-	55	34.127	ENSORLG00020002002	-	97	34.127	Oryzias_latipes_hni
ENSLACG00000004854	-	97	40.639	ENSORLG00020012971	-	88	40.639	Oryzias_latipes_hni
ENSLACG00000004854	-	64	32.000	ENSORLG00020009084	-	100	32.000	Oryzias_latipes_hni
ENSLACG00000004854	-	73	47.259	ENSORLG00020009401	-	79	47.259	Oryzias_latipes_hni
ENSLACG00000004854	-	100	39.982	ENSORLG00020014981	-	85	39.982	Oryzias_latipes_hni
ENSLACG00000004854	-	53	33.387	ENSORLG00015010510	-	98	33.387	Oryzias_latipes_hsok
ENSLACG00000004854	-	62	31.847	ENSORLG00015013242	-	50	31.847	Oryzias_latipes_hsok
ENSLACG00000004854	-	68	30.343	ENSORLG00015013369	-	94	30.343	Oryzias_latipes_hsok
ENSLACG00000004854	-	81	31.462	ENSORLG00015003846	-	97	31.462	Oryzias_latipes_hsok
ENSLACG00000004854	-	75	31.228	ENSORLG00015022314	-	95	31.228	Oryzias_latipes_hsok
ENSLACG00000004854	-	54	30.551	ENSORLG00015022127	-	81	30.551	Oryzias_latipes_hsok
ENSLACG00000004854	-	82	30.000	ENSOMEG00000017295	-	88	30.000	Oryzias_melastigma
ENSLACG00000004854	-	52	32.933	ENSOMEG00000013073	-	95	32.933	Oryzias_melastigma
ENSLACG00000004854	-	62	31.364	ENSOMEG00000005634	-	95	31.364	Oryzias_melastigma
ENSLACG00000004854	-	76	32.127	ENSPKIG00000006845	-	89	32.127	Paramormyrops_kingsleyae
ENSLACG00000004854	-	58	31.944	ENSPKIG00000020388	-	52	31.944	Paramormyrops_kingsleyae
ENSLACG00000004854	-	52	33.333	ENSPKIG00000005406	-	97	33.333	Paramormyrops_kingsleyae
ENSLACG00000004854	-	99	30.642	ENSPKIG00000016590	-	84	30.642	Paramormyrops_kingsleyae
ENSLACG00000004854	-	59	30.921	ENSPREG00000005134	-	55	30.921	Poecilia_reticulata
ENSLACG00000004854	-	62	32.548	ENSSLDG00000001005	-	54	32.548	Seriola_lalandi_dorsalis
ENSLACG00000004854	-	54	32.727	ENSSPAG00000008169	-	93	32.730	Stegastes_partitus
ENSLACG00000004854	-	50	32.381	ENSXMAG00000029360	-	61	32.381	Xiphophorus_maculatus
ENSLACG00000004854	-	54	32.143	ENSXMAG00000023370	-	59	32.143	Xiphophorus_maculatus