EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000004893 (Gene tree)
Gene ID: 102346514
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 64204 bases
Position: chrJH129680.1:143621-207824
Accession: 102346514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005504	YTH	PF04146.15	1.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005552	YTHDC1-201	3436	XM_006012162	ENSLACP00000005504	685 (aa)	XP_006012224	H3A783

Gene Model

Click here to download ENSLACG00000004893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004893	YTHDC1	92	74.022	ENSG00000083896	YTHDC1	82	88.158	Homo_sapiens
ENSLACG00000004893	YTHDC1	65	58.482	ENSAPOG00000013997	ythdc1	57	62.085	Acanthochromis_polyacanthus
ENSLACG00000004893	YTHDC1	92	74.922	ENSAMEG00000005688	YTHDC1	87	74.335	Ailuropoda_melanoleuca
ENSLACG00000004893	YTHDC1	66	57.987	ENSACIG00000019728	ythdc1	62	60.142	Amphilophus_citrinellus
ENSLACG00000004893	YTHDC1	92	73.460	ENSAPLG00000009921	YTHDC1	87	73.460	Anas_platyrhynchos
ENSLACG00000004893	YTHDC1	92	74.408	ENSACAG00000009697	YTHDC1	87	73.460	Anolis_carolinensis
ENSLACG00000004893	YTHDC1	92	74.062	ENSANAG00000001522	YTHDC1	87	74.138	Aotus_nancymaae
ENSLACG00000004893	YTHDC1	61	60.225	ENSACLG00000019371	ythdc1	60	63.205	Astatotilapia_calliptera
ENSLACG00000004893	YTHDC1	92	64.852	ENSAMXG00000006978	ythdc1	86	65.319	Astyanax_mexicanus
ENSLACG00000004893	YTHDC1	92	74.844	ENSBTAG00000015572	YTHDC1	87	73.981	Bos_taurus
ENSLACG00000004893	YTHDC1	92	73.906	ENSCJAG00000009934	YTHDC1	87	73.981	Callithrix_jacchus
ENSLACG00000004893	YTHDC1	92	75.078	ENSCAFG00000002821	YTHDC1	87	74.491	Canis_familiaris
ENSLACG00000004893	YTHDC1	92	75.078	ENSCAFG00020027112	YTHDC1	87	74.491	Canis_lupus_dingo
ENSLACG00000004893	YTHDC1	92	66.667	ENSCHIG00000004810	YTHDC1	88	71.053	Capra_hircus
ENSLACG00000004893	YTHDC1	92	74.022	ENSTSYG00000011668	YTHDC1	87	73.940	Carlito_syrichta
ENSLACG00000004893	YTHDC1	92	49.296	ENSCAPG00000008722	YTHDC1	85	49.689	Cavia_aperea
ENSLACG00000004893	YTHDC1	92	68.075	ENSCPOG00000010929	YTHDC1	86	65.934	Cavia_porcellus
ENSLACG00000004893	YTHDC1	92	74.138	ENSCCAG00000035754	YTHDC1	87	73.071	Cebus_capucinus
ENSLACG00000004893	YTHDC1	92	72.994	ENSCATG00000036320	YTHDC1	91	71.053	Cercocebus_atys
ENSLACG00000004893	YTHDC1	92	73.529	ENSCLAG00000005482	YTHDC1	88	72.317	Chinchilla_lanigera
ENSLACG00000004893	YTHDC1	92	73.906	ENSCSAG00000005252	YTHDC1	87	73.981	Chlorocebus_sabaeus
ENSLACG00000004893	YTHDC1	92	73.934	ENSCPBG00000021965	YTHDC1	91	72.670	Chrysemys_picta_bellii
ENSLACG00000004893	YTHDC1	92	73.906	ENSCANG00000004769	YTHDC1	90	71.053	Colobus_angolensis_palliatus
ENSLACG00000004893	YTHDC1	92	72.798	ENSCGRG00001000816	Ythdc1	87	72.713	Cricetulus_griseus_chok1gshd
ENSLACG00000004893	YTHDC1	92	73.709	ENSCGRG00000009807	Ythdc1	88	73.626	Cricetulus_griseus_crigri
ENSLACG00000004893	YTHDC1	60	61.872	ENSCSEG00000020404	ythdc1	58	66.085	Cynoglossus_semilaevis
ENSLACG00000004893	YTHDC1	61	61.086	ENSCVAG00000022349	ythdc1	59	62.955	Cyprinodon_variegatus
ENSLACG00000004893	YTHDC1	92	62.208	ENSDARG00000051953	ythdc1	86	61.897	Danio_rerio
ENSLACG00000004893	YTHDC1	92	74.882	ENSDNOG00000004949	YTHDC1	87	73.776	Dasypus_novemcinctus
ENSLACG00000004893	YTHDC1	92	74.219	ENSDORG00000013045	Ythdc1	88	73.824	Dipodomys_ordii
ENSLACG00000004893	YTHDC1	69	97.183	ENSETEG00000001878	YTHDC1	63	93.506	Echinops_telfairi
ENSLACG00000004893	YTHDC1	92	74.766	ENSEASG00005018383	YTHDC1	92	74.563	Equus_asinus_asinus
ENSLACG00000004893	YTHDC1	92	75.078	ENSECAG00000018303	YTHDC1	92	74.881	Equus_caballus
ENSLACG00000004893	YTHDC1	62	88.208	ENSEEUG00000015466	YTHDC1	87	72.841	Erinaceus_europaeus
ENSLACG00000004893	YTHDC1	92	60.150	ENSELUG00000014029	ythdc1	88	59.812	Esox_lucius
ENSLACG00000004893	YTHDC1	92	75.039	ENSFCAG00000026791	YTHDC1	87	74.804	Felis_catus
ENSLACG00000004893	YTHDC1	62	84.368	ENSFALG00000006581	YTHDC1	78	91.071	Ficedula_albicollis
ENSLACG00000004893	YTHDC1	92	74.448	ENSFDAG00000018560	YTHDC1	88	74.331	Fukomys_damarensis
ENSLACG00000004893	YTHDC1	92	74.092	ENSGALG00000035906	YTHDC1	81	73.144	Gallus_gallus
ENSLACG00000004893	YTHDC1	61	62.731	ENSGACG00000015486	ythdc1	56	64.394	Gasterosteus_aculeatus
ENSLACG00000004893	YTHDC1	92	72.855	ENSGAGG00000007108	YTHDC1	87	72.387	Gopherus_agassizii
ENSLACG00000004893	YTHDC1	92	72.994	ENSGGOG00000021958	YTHDC1	91	71.053	Gorilla_gorilla
ENSLACG00000004893	YTHDC1	61	60.225	ENSHBUG00000019288	ythdc1	59	63.205	Haplochromis_burtoni
ENSLACG00000004893	YTHDC1	92	58.228	ENSHGLG00000003239	-	80	58.479	Heterocephalus_glaber_female
ENSLACG00000004893	YTHDC1	92	73.717	ENSHGLG00000006319	-	87	73.479	Heterocephalus_glaber_female
ENSLACG00000004893	YTHDC1	92	73.469	ENSHGLG00100001556	-	88	72.699	Heterocephalus_glaber_male
ENSLACG00000004893	YTHDC1	92	57.323	ENSHGLG00100008060	-	81	56.940	Heterocephalus_glaber_male
ENSLACG00000004893	YTHDC1	66	52.033	ENSHCOG00000001520	ythdc1	66	61.732	Hippocampus_comes
ENSLACG00000004893	YTHDC1	92	66.823	ENSIPUG00000018136	ythdc1	86	64.798	Ictalurus_punctatus
ENSLACG00000004893	YTHDC1	62	86.574	ENSSTOG00000013652	YTHDC1	87	72.910	Ictidomys_tridecemlineatus
ENSLACG00000004893	YTHDC1	92	72.543	ENSJJAG00000010268	Ythdc1	88	72.699	Jaculus_jaculus
ENSLACG00000004893	YTHDC1	61	59.732	ENSKMAG00000006483	ythdc1	85	62.022	Kryptolebias_marmoratus
ENSLACG00000004893	YTHDC1	61	60.952	ENSLBEG00000020831	ythdc1	65	59.207	Labrus_bergylta
ENSLACG00000004893	YTHDC1	92	72.441	ENSLOCG00000003045	ythdc1	86	87.828	Lepisosteus_oculatus
ENSLACG00000004893	YTHDC1	92	74.727	ENSLAFG00000021592	YTHDC1	94	88.056	Loxodonta_africana
ENSLACG00000004893	YTHDC1	92	72.994	ENSMFAG00000031927	YTHDC1	90	71.053	Macaca_fascicularis
ENSLACG00000004893	YTHDC1	92	73.906	ENSMMUG00000002265	YTHDC1	88	73.065	Macaca_mulatta
ENSLACG00000004893	YTHDC1	92	73.906	ENSMNEG00000033751	YTHDC1	90	71.053	Macaca_nemestrina
ENSLACG00000004893	YTHDC1	92	73.906	ENSMLEG00000042147	YTHDC1	90	71.053	Mandrillus_leucophaeus
ENSLACG00000004893	YTHDC1	60	60.682	ENSMAMG00000013122	ythdc1	58	63.288	Mastacembelus_armatus
ENSLACG00000004893	YTHDC1	61	60.225	ENSMZEG00005023173	ythdc1	59	63.205	Maylandia_zebra
ENSLACG00000004893	YTHDC1	92	73.618	ENSMGAG00000010391	YTHDC1	86	72.828	Meleagris_gallopavo
ENSLACG00000004893	YTHDC1	92	73.107	ENSMAUG00000001286	Ythdc1	87	73.023	Mesocricetus_auratus
ENSLACG00000004893	YTHDC1	92	75.196	ENSMICG00000034640	YTHDC1	87	73.561	Microcebus_murinus
ENSLACG00000004893	YTHDC1	92	73.364	ENSMOCG00000020201	Ythdc1	87	73.561	Microtus_ochrogaster
ENSLACG00000004893	YTHDC1	87	47.360	ENSMODG00000010076	-	56	58.824	Monodelphis_domestica
ENSLACG00000004893	YTHDC1	92	74.092	ENSMODG00000020754	-	86	75.513	Monodelphis_domestica
ENSLACG00000004893	YTHDC1	66	64.000	ENSMODG00000014337	-	64	64.885	Monodelphis_domestica
ENSLACG00000004893	YTHDC1	69	55.042	ENSMODG00000009173	-	83	58.312	Monodelphis_domestica
ENSLACG00000004893	YTHDC1	50	58.187	ENSMODG00000004117	-	92	60.064	Monodelphis_domestica
ENSLACG00000004893	YTHDC1	59	63.592	ENSMALG00000013412	ythdc1	55	67.391	Monopterus_albus
ENSLACG00000004893	YTHDC1	92	73.750	MGP_CAROLIEiJ_G0027347	Ythdc1	87	72.727	Mus_caroli
ENSLACG00000004893	YTHDC1	92	72.855	ENSMUSG00000035851	Ythdc1	87	72.300	Mus_musculus
ENSLACG00000004893	YTHDC1	92	73.167	MGP_PahariEiJ_G0017126	Ythdc1	87	72.613	Mus_pahari
ENSLACG00000004893	YTHDC1	92	73.011	MGP_SPRETEiJ_G0028339	Ythdc1	87	72.457	Mus_spretus
ENSLACG00000004893	YTHDC1	92	62.809	ENSMPUG00000001743	YTHDC1	54	89.770	Mustela_putorius_furo
ENSLACG00000004893	YTHDC1	92	76.025	ENSMLUG00000016300	YTHDC1	88	74.408	Myotis_lucifugus
ENSLACG00000004893	YTHDC1	59	61.836	ENSNGAG00000024000	Ythdc1	85	61.017	Nannospalax_galili
ENSLACG00000004893	YTHDC1	61	60.092	ENSNBRG00000007663	ythdc1	70	63.825	Neolamprologus_brichardi
ENSLACG00000004893	YTHDC1	92	73.107	ENSNLEG00000009202	YTHDC1	87	73.023	Nomascus_leucogenys
ENSLACG00000004893	YTHDC1	73	75.251	ENSMEUG00000007128	YTHDC1	57	75.251	Notamacropus_eugenii
ENSLACG00000004893	YTHDC1	65	91.060	ENSOPRG00000008986	YTHDC1	62	90.970	Ochotona_princeps
ENSLACG00000004893	YTHDC1	92	74.016	ENSODEG00000001715	YTHDC1	87	73.776	Octodon_degus
ENSLACG00000004893	YTHDC1	65	62.391	ENSONIG00000012651	ythdc1	58	66.434	Oreochromis_niloticus
ENSLACG00000004893	YTHDC1	92	66.308	ENSOANG00000014398	YTHDC1	74	89.610	Ornithorhynchus_anatinus
ENSLACG00000004893	YTHDC1	92	67.136	ENSOCUG00000015886	YTHDC1	54	92.042	Oryctolagus_cuniculus
ENSLACG00000004893	YTHDC1	55	65.174	ENSORLG00000030544	ythdc1	60	65.441	Oryzias_latipes
ENSLACG00000004893	YTHDC1	67	59.583	ENSORLG00020019316	ythdc1	60	65.441	Oryzias_latipes_hni
ENSLACG00000004893	YTHDC1	75	57.371	ENSOMEG00000000551	ythdc1	60	64.778	Oryzias_melastigma
ENSLACG00000004893	YTHDC1	92	74.648	ENSOGAG00000003362	YTHDC1	87	74.568	Otolemur_garnettii
ENSLACG00000004893	YTHDC1	92	74.844	ENSOARG00000008633	YTHDC1	87	73.981	Ovis_aries
ENSLACG00000004893	YTHDC1	92	73.261	ENSPPAG00000041315	YTHDC1	90	71.457	Pan_paniscus
ENSLACG00000004893	YTHDC1	92	74.268	ENSPPRG00000011979	YTHDC1	87	74.034	Panthera_pardus
ENSLACG00000004893	YTHDC1	92	73.960	ENSPTIG00000015527	YTHDC1	88	73.725	Panthera_tigris_altaica
ENSLACG00000004893	YTHDC1	92	73.261	ENSPTRG00000016105	YTHDC1	90	71.457	Pan_troglodytes
ENSLACG00000004893	YTHDC1	92	72.994	ENSPANG00000021590	YTHDC1	87	73.065	Papio_anubis
ENSLACG00000004893	YTHDC1	92	67.496	ENSPKIG00000018497	ythdc1	87	66.252	Paramormyrops_kingsleyae
ENSLACG00000004893	YTHDC1	92	73.776	ENSPSIG00000002782	YTHDC1	88	73.302	Pelodiscus_sinensis
ENSLACG00000004893	YTHDC1	92	73.865	ENSPEMG00000013850	Ythdc1	88	73.783	Peromyscus_maniculatus_bairdii
ENSLACG00000004893	YTHDC1	92	73.776	ENSPCIG00000006870	YTHDC1	86	75.197	Phascolarctos_cinereus
ENSLACG00000004893	YTHDC1	60	59.497	ENSPFOG00000013404	ythdc1	59	64.750	Poecilia_formosa
ENSLACG00000004893	YTHDC1	60	59.497	ENSPLAG00000011079	ythdc1	84	64.750	Poecilia_latipinna
ENSLACG00000004893	YTHDC1	60	59.497	ENSPMEG00000009238	ythdc1	59	64.750	Poecilia_mexicana
ENSLACG00000004893	YTHDC1	60	59.189	ENSPREG00000016973	ythdc1	55	62.827	Poecilia_reticulata
ENSLACG00000004893	YTHDC1	84	76.541	ENSPPYG00000014726	YTHDC1	91	76.804	Pongo_abelii
ENSLACG00000004893	YTHDC1	75	80.455	ENSPCAG00000009607	YTHDC1	71	79.545	Procavia_capensis
ENSLACG00000004893	YTHDC1	92	69.767	ENSPCOG00000019105	YTHDC1	86	69.051	Propithecus_coquereli
ENSLACG00000004893	YTHDC1	92	72.473	ENSPVAG00000015551	YTHDC1	87	71.607	Pteropus_vampyrus
ENSLACG00000004893	YTHDC1	61	60.225	ENSPNYG00000011687	ythdc1	60	63.205	Pundamilia_nyererei
ENSLACG00000004893	YTHDC1	92	69.207	ENSPNAG00000028365	ythdc1	87	69.003	Pygocentrus_nattereri
ENSLACG00000004893	YTHDC1	92	72.043	ENSRNOG00000001996	Ythdc1	87	72.265	Rattus_norvegicus
ENSLACG00000004893	YTHDC1	92	72.685	ENSRBIG00000028279	YTHDC1	88	72.755	Rhinopithecus_bieti
ENSLACG00000004893	YTHDC1	92	73.906	ENSRROG00000035028	YTHDC1	90	71.053	Rhinopithecus_roxellana
ENSLACG00000004893	YTHDC1	92	72.994	ENSSBOG00000022353	YTHDC1	90	71.053	Saimiri_boliviensis_boliviensis
ENSLACG00000004893	YTHDC1	92	74.092	ENSSHAG00000002538	YTHDC1	89	77.381	Sarcophilus_harrisii
ENSLACG00000004893	YTHDC1	92	67.445	ENSSFOG00015003298	ythdc1	78	67.462	Scleropages_formosus
ENSLACG00000004893	YTHDC1	60	61.644	ENSSMAG00000009086	ythdc1	60	62.896	Scophthalmus_maximus
ENSLACG00000004893	YTHDC1	50	67.391	ENSSDUG00000022008	ythdc1	59	64.108	Seriola_dumerili
ENSLACG00000004893	YTHDC1	50	67.391	ENSSLDG00000007926	ythdc1	59	64.108	Seriola_lalandi_dorsalis
ENSLACG00000004893	YTHDC1	73	81.641	ENSSARG00000010960	YTHDC1	89	80.888	Sorex_araneus
ENSLACG00000004893	YTHDC1	92	73.028	ENSSPUG00000009357	YTHDC1	91	73.028	Sphenodon_punctatus
ENSLACG00000004893	YTHDC1	61	61.124	ENSSPAG00000011449	ythdc1	59	64.334	Stegastes_partitus
ENSLACG00000004893	YTHDC1	92	74.068	ENSSSCG00000035505	YTHDC1	92	73.438	Sus_scrofa
ENSLACG00000004893	YTHDC1	92	74.882	ENSTGUG00000004452	-	86	73.934	Taeniopygia_guttata
ENSLACG00000004893	YTHDC1	61	55.629	ENSTRUG00000010142	ythdc1	61	62.565	Takifugu_rubripes
ENSLACG00000004893	YTHDC1	65	59.570	ENSTNIG00000013243	ythdc1	62	64.203	Tetraodon_nigroviridis
ENSLACG00000004893	YTHDC1	92	71.248	ENSTBEG00000011546	YTHDC1	54	89.948	Tupaia_belangeri
ENSLACG00000004893	YTHDC1	92	74.219	ENSTTRG00000005083	YTHDC1	87	73.626	Tursiops_truncatus
ENSLACG00000004893	YTHDC1	90	75.436	ENSUAMG00000010388	YTHDC1	92	75.199	Ursus_americanus
ENSLACG00000004893	YTHDC1	92	66.772	ENSUMAG00000013668	YTHDC1	72	73.938	Ursus_maritimus
ENSLACG00000004893	YTHDC1	92	72.370	ENSVPAG00000009040	YTHDC1	86	70.709	Vicugna_pacos
ENSLACG00000004893	YTHDC1	92	74.154	ENSVVUG00000005387	YTHDC1	92	74.881	Vulpes_vulpes
ENSLACG00000004893	YTHDC1	92	68.504	ENSXETG00000017960	ythdc1	86	66.822	Xenopus_tropicalis