EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004899 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC102357408
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 34281 bases
Position: chrJH128925.1:143855-178135
Accession: 102357408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005511	MMR_HSR1	PF01926.23	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005559	-	4151	XM_006010487	ENSLACP00000005511	449 (aa)	XP_006010549	H3A790

Gene Model

Click here to download ENSLACG00000004899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004899	-	99	62.138	ENSLACG00000017433	si:dkey-98f17.5	99	62.000
ENSLACG00000004899	-	99	62.838	ENSLACG00000006280	si:ch211-11k18.4	98	62.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004899	-	99	62.138	ENSAPOG00000018833	si:ch211-11k18.4	99	62.138	Acanthochromis_polyacanthus
ENSLACG00000004899	-	99	62.361	ENSAPOG00000010378	si:dkey-98f17.5	100	62.361	Acanthochromis_polyacanthus
ENSLACG00000004899	-	99	62.138	ENSACIG00000017719	si:dkey-98f17.5	100	62.138	Amphilophus_citrinellus
ENSLACG00000004899	-	99	60.754	ENSACIG00000006696	si:ch211-11k18.4	99	61.197	Amphilophus_citrinellus
ENSLACG00000004899	-	99	62.138	ENSAOCG00000014284	si:ch211-11k18.4	99	62.138	Amphiprion_ocellaris
ENSLACG00000004899	-	99	62.806	ENSAOCG00000008661	si:dkey-98f17.5	100	62.806	Amphiprion_ocellaris
ENSLACG00000004899	-	99	62.138	ENSAPEG00000014910	si:ch211-11k18.4	99	62.138	Amphiprion_percula
ENSLACG00000004899	-	99	62.584	ENSAPEG00000022447	si:dkey-98f17.5	100	62.584	Amphiprion_percula
ENSLACG00000004899	-	99	63.029	ENSATEG00000007188	si:dkey-98f17.5	100	63.029	Anabas_testudineus
ENSLACG00000004899	-	99	62.889	ENSATEG00000004775	si:ch211-11k18.4	99	62.889	Anabas_testudineus
ENSLACG00000004899	-	99	61.211	ENSACAG00000028632	-	98	61.211	Anolis_carolinensis
ENSLACG00000004899	-	99	63.029	ENSACLG00000007907	si:ch211-11k18.4	99	63.029	Astatotilapia_calliptera
ENSLACG00000004899	-	99	62.361	ENSACLG00000001308	si:dkey-98f17.5	100	62.361	Astatotilapia_calliptera
ENSLACG00000004899	-	99	62.584	ENSAMXG00000001190	si:dkey-98f17.5	100	62.584	Astyanax_mexicanus
ENSLACG00000004899	-	100	63.111	ENSAMXG00000017817	si:ch211-11k18.4	100	63.111	Astyanax_mexicanus
ENSLACG00000004899	-	83	61.230	ENSCING00000020807	-	98	61.230	Ciona_intestinalis
ENSLACG00000004899	-	99	57.271	ENSCSAVG00000009987	-	99	57.271	Ciona_savignyi
ENSLACG00000004899	-	99	62.138	ENSCSEG00000017661	si:ch211-11k18.4	99	62.138	Cynoglossus_semilaevis
ENSLACG00000004899	-	99	62.584	ENSCSEG00000017512	si:dkey-98f17.5	98	62.648	Cynoglossus_semilaevis
ENSLACG00000004899	-	99	62.806	ENSCVAG00000011351	si:dkey-98f17.5	100	62.806	Cyprinodon_variegatus
ENSLACG00000004899	-	99	62.584	ENSCVAG00000015346	si:ch211-11k18.4	99	62.584	Cyprinodon_variegatus
ENSLACG00000004899	-	98	63.182	ENSDARG00000068863	si:dkey-98f17.5	100	63.182	Danio_rerio
ENSLACG00000004899	-	100	63.111	ENSDARG00000087869	si:ch211-11k18.4	100	72.959	Danio_rerio
ENSLACG00000004899	-	81	56.749	ENSEBUG00000007620	si:dkey-98f17.5	97	56.749	Eptatretus_burgeri
ENSLACG00000004899	-	99	61.693	ENSELUG00000003365	si:dkey-98f17.5	100	61.693	Esox_lucius
ENSLACG00000004899	-	99	62.138	ENSFHEG00000012744	si:dkey-98f17.5	100	62.138	Fundulus_heteroclitus
ENSLACG00000004899	-	99	62.138	ENSFHEG00000019820	si:ch211-11k18.4	99	62.138	Fundulus_heteroclitus
ENSLACG00000004899	-	89	56.500	ENSGMOG00000003492	si:ch211-11k18.4	99	56.500	Gadus_morhua
ENSLACG00000004899	-	99	61.915	ENSGAFG00000005677	si:ch211-11k18.4	99	61.915	Gambusia_affinis
ENSLACG00000004899	-	99	61.915	ENSGAFG00000012362	si:dkey-98f17.5	89	61.915	Gambusia_affinis
ENSLACG00000004899	-	85	66.406	ENSGACG00000013134	si:ch211-11k18.4	99	64.750	Gasterosteus_aculeatus
ENSLACG00000004899	-	58	76.062	ENSGACG00000009399	si:dkey-98f17.5	100	76.062	Gasterosteus_aculeatus
ENSLACG00000004899	-	99	62.361	ENSHBUG00000008331	si:dkey-98f17.5	100	62.361	Haplochromis_burtoni
ENSLACG00000004899	-	99	63.252	ENSHBUG00000020638	si:ch211-11k18.4	99	63.252	Haplochromis_burtoni
ENSLACG00000004899	-	100	61.333	ENSHCOG00000014773	si:ch211-11k18.4	100	61.333	Hippocampus_comes
ENSLACG00000004899	-	99	61.124	ENSHCOG00000016505	si:dkey-98f17.5	98	61.124	Hippocampus_comes
ENSLACG00000004899	-	96	61.894	ENSIPUG00000016678	si:ch211-11k18.4	99	61.894	Ictalurus_punctatus
ENSLACG00000004899	-	100	61.470	ENSIPUG00000019981	si:dkey-98f17.5	100	61.470	Ictalurus_punctatus
ENSLACG00000004899	-	85	59.580	ENSIPUG00000016694	si:ch211-11k18.4	85	59.580	Ictalurus_punctatus
ENSLACG00000004899	-	99	61.470	ENSKMAG00000014997	si:dkey-98f17.5	100	61.470	Kryptolebias_marmoratus
ENSLACG00000004899	-	99	62.138	ENSKMAG00000009327	si:ch211-11k18.4	99	62.138	Kryptolebias_marmoratus
ENSLACG00000004899	-	99	61.470	ENSLBEG00000012756	si:dkey-98f17.5	100	61.470	Labrus_bergylta
ENSLACG00000004899	-	99	62.222	ENSLOCG00000003824	si:dkey-98f17.5	99	62.222	Lepisosteus_oculatus
ENSLACG00000004899	-	96	63.048	ENSMAMG00000002536	si:ch211-11k18.4	99	63.048	Mastacembelus_armatus
ENSLACG00000004899	-	99	62.361	ENSMAMG00000014528	si:dkey-98f17.5	100	62.361	Mastacembelus_armatus
ENSLACG00000004899	-	99	62.361	ENSMZEG00005016572	si:dkey-98f17.5	100	62.361	Maylandia_zebra
ENSLACG00000004899	-	99	62.806	ENSMZEG00005008941	si:ch211-11k18.4	99	62.806	Maylandia_zebra
ENSLACG00000004899	-	99	60.667	ENSMMOG00000012485	si:ch211-11k18.4	99	60.667	Mola_mola
ENSLACG00000004899	-	98	61.731	ENSMALG00000012761	si:dkey-98f17.5	100	61.731	Monopterus_albus
ENSLACG00000004899	-	99	61.333	ENSMALG00000019735	si:ch211-11k18.4	99	61.333	Monopterus_albus
ENSLACG00000004899	-	96	63.510	ENSNBRG00000002220	si:ch211-11k18.4	99	63.510	Neolamprologus_brichardi
ENSLACG00000004899	-	99	62.500	ENSNBRG00000006068	si:dkey-98f17.5	100	62.500	Neolamprologus_brichardi
ENSLACG00000004899	-	99	63.474	ENSONIG00000019412	si:ch211-11k18.4	99	63.474	Oreochromis_niloticus
ENSLACG00000004899	-	99	62.361	ENSONIG00000013568	si:dkey-98f17.5	100	62.361	Oreochromis_niloticus
ENSLACG00000004899	-	91	63.659	ENSORLG00000007958	si:dkey-98f17.5	95	63.659	Oryzias_latipes
ENSLACG00000004899	-	99	61.470	ENSORLG00000012015	si:ch211-11k18.4	99	61.470	Oryzias_latipes
ENSLACG00000004899	-	99	61.247	ENSORLG00020012386	si:ch211-11k18.4	99	61.247	Oryzias_latipes_hni
ENSLACG00000004899	-	99	61.470	ENSORLG00020013350	si:dkey-98f17.5	100	61.470	Oryzias_latipes_hni
ENSLACG00000004899	-	99	61.470	ENSORLG00015022862	si:ch211-11k18.4	99	61.470	Oryzias_latipes_hsok
ENSLACG00000004899	-	99	61.915	ENSORLG00015002000	si:dkey-98f17.5	100	61.915	Oryzias_latipes_hsok
ENSLACG00000004899	-	99	61.470	ENSOMEG00000018686	si:ch211-11k18.4	99	61.470	Oryzias_melastigma
ENSLACG00000004899	-	99	61.470	ENSOMEG00000003154	si:dkey-98f17.5	100	61.609	Oryzias_melastigma
ENSLACG00000004899	-	99	60.356	ENSPKIG00000024621	si:dkey-98f17.5	100	60.356	Paramormyrops_kingsleyae
ENSLACG00000004899	-	99	62.138	ENSPKIG00000018807	si:ch211-11k18.4	99	62.138	Paramormyrops_kingsleyae
ENSLACG00000004899	-	99	61.074	ENSPKIG00000023918	-	98	60.938	Paramormyrops_kingsleyae
ENSLACG00000004899	-	99	61.470	ENSPMGG00000019065	si:dkey-98f17.5	100	61.470	Periophthalmus_magnuspinnatus
ENSLACG00000004899	-	99	62.361	ENSPMGG00000016507	si:ch211-11k18.4	99	62.361	Periophthalmus_magnuspinnatus
ENSLACG00000004899	-	99	62.806	ENSPFOG00000007976	si:ch211-11k18.4	99	62.806	Poecilia_formosa
ENSLACG00000004899	-	99	61.504	ENSPFOG00000015142	si:dkey-98f17.5	100	61.504	Poecilia_formosa
ENSLACG00000004899	-	99	62.138	ENSPLAG00000003709	si:dkey-98f17.5	100	62.138	Poecilia_latipinna
ENSLACG00000004899	-	99	62.806	ENSPLAG00000019794	si:ch211-11k18.4	99	62.806	Poecilia_latipinna
ENSLACG00000004899	-	99	61.693	ENSPMEG00000018709	si:dkey-98f17.5	94	61.693	Poecilia_mexicana
ENSLACG00000004899	-	99	62.806	ENSPMEG00000024198	si:ch211-11k18.4	99	63.048	Poecilia_mexicana
ENSLACG00000004899	-	89	64.500	ENSPREG00000015319	si:ch211-11k18.4	91	64.500	Poecilia_reticulata
ENSLACG00000004899	-	98	61.503	ENSPREG00000000708	si:dkey-98f17.5	100	61.503	Poecilia_reticulata
ENSLACG00000004899	-	99	63.252	ENSPNYG00000017099	si:ch211-11k18.4	99	63.252	Pundamilia_nyererei
ENSLACG00000004899	-	99	62.361	ENSPNYG00000017266	si:dkey-98f17.5	100	62.361	Pundamilia_nyererei
ENSLACG00000004899	-	99	63.029	ENSPNAG00000021352	si:dkey-98f17.5	100	63.029	Pygocentrus_nattereri
ENSLACG00000004899	-	100	63.556	ENSPNAG00000022138	si:ch211-11k18.4	100	63.556	Pygocentrus_nattereri
ENSLACG00000004899	-	100	59.465	ENSSFOG00015000985	si:ch211-11k18.4	95	59.465	Scleropages_formosus
ENSLACG00000004899	-	99	58.315	ENSSFOG00015017965	si:dkey-98f17.5	100	58.315	Scleropages_formosus
ENSLACG00000004899	-	99	61.470	ENSSMAG00000011905	si:dkey-98f17.5	100	61.470	Scophthalmus_maximus
ENSLACG00000004899	-	99	61.915	ENSSMAG00000009651	si:ch211-11k18.4	99	61.915	Scophthalmus_maximus
ENSLACG00000004899	-	99	60.579	ENSSDUG00000013457	si:dkey-98f17.5	100	60.579	Seriola_dumerili
ENSLACG00000004899	-	99	62.444	ENSSDUG00000016411	si:ch211-11k18.4	99	62.444	Seriola_dumerili
ENSLACG00000004899	-	99	62.222	ENSSLDG00000019145	si:ch211-11k18.4	99	62.222	Seriola_lalandi_dorsalis
ENSLACG00000004899	-	99	60.579	ENSSLDG00000025395	si:dkey-98f17.5	100	60.579	Seriola_lalandi_dorsalis
ENSLACG00000004899	-	87	61.893	ENSSPUG00000010096	-	99	61.421	Sphenodon_punctatus
ENSLACG00000004899	-	99	62.361	ENSSPAG00000018800	si:dkey-98f17.5	100	62.361	Stegastes_partitus
ENSLACG00000004899	-	99	61.693	ENSSPAG00000010697	si:ch211-11k18.4	99	61.693	Stegastes_partitus
ENSLACG00000004899	-	99	62.361	ENSTRUG00000021287	si:dkey-98f17.5	100	62.361	Takifugu_rubripes
ENSLACG00000004899	-	99	62.584	ENSTRUG00000020291	si:ch211-11k18.4	99	62.584	Takifugu_rubripes
ENSLACG00000004899	-	100	62.031	ENSXETG00000031783	-	100	62.031	Xenopus_tropicalis
ENSLACG00000004899	-	99	61.556	ENSXCOG00000018094	si:ch211-11k18.4	99	61.556	Xiphophorus_couchianus
ENSLACG00000004899	-	99	62.277	ENSXCOG00000017002	si:dkey-98f17.5	100	62.277	Xiphophorus_couchianus
ENSLACG00000004899	-	99	62.361	ENSXMAG00000007688	si:dkey-98f17.5	95	62.361	Xiphophorus_maculatus
ENSLACG00000004899	-	99	62.138	ENSXMAG00000021235	si:ch211-11k18.4	99	62.138	Xiphophorus_maculatus