EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000005075 (Gene tree)
Gene ID: 102359086
Gene Symbol: -
Alias: -
Full Name: poly(ADP-ribose) polymerase family member 4
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 132819 bases
Position: chrJH127950.1:150816-283634
Accession: 102359086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005712	PARP	PF00644.20	1.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005761	-	6737	XM_006006686	ENSLACP00000005712	1731 (aa)	XP_006006748	H3A7U1

Gene Model

Click here to download ENSLACG00000005075's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03410	Base excision repair	KEGG
lcm04210	Apoptosis	KEGG
lcm04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005075	-	99	45.304	ENSG00000102699	PARP4	99	45.289	Homo_sapiens
ENSLACG00000005075	-	70	43.755	ENSAPOG00000020678	parp4	93	43.765	Acanthochromis_polyacanthus
ENSLACG00000005075	-	80	52.632	ENSAMEG00000017377	PARP4	99	49.797	Ailuropoda_melanoleuca
ENSLACG00000005075	-	78	45.113	ENSACIG00000021890	parp4	99	43.811	Amphilophus_citrinellus
ENSLACG00000005075	-	81	45.517	ENSAPEG00000014531	parp4	68	45.517	Amphiprion_percula
ENSLACG00000005075	-	70	46.570	ENSATEG00000023758	parp4	81	46.512	Anabas_testudineus
ENSLACG00000005075	-	71	50.000	ENSAPLG00000005053	PARP4	99	51.916	Anas_platyrhynchos
ENSLACG00000005075	-	95	47.915	ENSACAG00000001725	PARP4	86	54.362	Anolis_carolinensis
ENSLACG00000005075	-	80	55.333	ENSANAG00000021254	PARP4	83	55.333	Aotus_nancymaae
ENSLACG00000005075	-	79	45.205	ENSACLG00000009783	parp4	72	45.833	Astatotilapia_calliptera
ENSLACG00000005075	-	79	46.340	ENSAMXG00000016657	parp4	78	46.340	Astyanax_mexicanus
ENSLACG00000005075	-	81	50.121	ENSBTAG00000025400	PARP4	77	49.919	Bos_taurus
ENSLACG00000005075	-	80	55.333	ENSCJAG00000004452	PARP4	83	55.333	Callithrix_jacchus
ENSLACG00000005075	-	99	43.458	ENSCAFG00000007375	PARP4	88	56.250	Canis_familiaris
ENSLACG00000005075	-	99	43.491	ENSCAFG00020002104	PARP4	99	54.839	Canis_lupus_dingo
ENSLACG00000005075	-	91	49.350	ENSTSYG00000014701	PARP4	99	43.634	Carlito_syrichta
ENSLACG00000005075	-	80	50.331	ENSCPOG00000014672	PARP4	81	50.331	Cavia_porcellus
ENSLACG00000005075	-	80	53.333	ENSCCAG00000032863	PARP4	81	53.333	Cebus_capucinus
ENSLACG00000005075	-	99	43.711	ENSCATG00000035770	PARP4	72	48.454	Cercocebus_atys
ENSLACG00000005075	-	99	45.191	ENSCSAG00000018004	PARP4	82	53.659	Chlorocebus_sabaeus
ENSLACG00000005075	-	53	58.295	ENSCHOG00000006882	-	74	58.295	Choloepus_hoffmanni
ENSLACG00000005075	-	79	62.759	ENSCPBG00000020893	PARP4	79	62.759	Chrysemys_picta_bellii
ENSLACG00000005075	-	81	53.595	ENSCANG00000014573	PARP4	82	53.595	Colobus_angolensis_palliatus
ENSLACG00000005075	-	80	53.247	ENSCGRG00001021886	Parp4	79	53.247	Cricetulus_griseus_chok1gshd
ENSLACG00000005075	-	80	53.247	ENSCGRG00000011944	Parp4	78	53.247	Cricetulus_griseus_crigri
ENSLACG00000005075	-	79	43.622	ENSCSEG00000004631	parp4	83	44.347	Cynoglossus_semilaevis
ENSLACG00000005075	-	74	47.260	ENSCVAG00000010227	parp4	100	47.260	Cyprinodon_variegatus
ENSLACG00000005075	-	79	47.368	ENSDARG00000069934	parp4	76	47.368	Danio_rerio
ENSLACG00000005075	-	80	53.333	ENSDNOG00000037733	PARP4	71	53.333	Dasypus_novemcinctus
ENSLACG00000005075	-	81	51.282	ENSDORG00000029090	Parp4	99	51.282	Dipodomys_ordii
ENSLACG00000005075	-	99	43.395	ENSEASG00005000229	PARP4	96	51.829	Equus_asinus_asinus
ENSLACG00000005075	-	99	43.145	ENSECAG00000009458	PARP4	82	51.553	Equus_caballus
ENSLACG00000005075	-	79	46.778	ENSELUG00000005711	parp4	77	46.541	Esox_lucius
ENSLACG00000005075	-	85	50.522	ENSFCAG00000031561	PARP4	86	50.522	Felis_catus
ENSLACG00000005075	-	80	49.838	ENSFDAG00000010439	PARP4	80	49.838	Fukomys_damarensis
ENSLACG00000005075	-	71	45.763	ENSFHEG00000021894	parp4	95	45.763	Fundulus_heteroclitus
ENSLACG00000005075	-	66	58.333	ENSGMOG00000001674	parp4	72	58.333	Gadus_morhua
ENSLACG00000005075	-	87	50.000	ENSGALG00000034473	PARP4	95	50.000	Gallus_gallus
ENSLACG00000005075	-	77	44.115	ENSGACG00000008521	parp4	79	44.049	Gasterosteus_aculeatus
ENSLACG00000005075	-	76	67.416	ENSGAGG00000006063	PARP4	77	67.442	Gopherus_agassizii
ENSLACG00000005075	-	97	44.898	ENSGGOG00000002940	PARP4	98	44.671	Gorilla_gorilla
ENSLACG00000005075	-	61	48.290	ENSHBUG00000018539	parp4	99	48.052	Haplochromis_burtoni
ENSLACG00000005075	-	99	42.659	ENSHGLG00000008309	PARP4	80	49.437	Heterocephalus_glaber_female
ENSLACG00000005075	-	99	42.659	ENSHGLG00100012331	PARP4	80	49.437	Heterocephalus_glaber_male
ENSLACG00000005075	-	80	42.945	ENSHCOG00000017842	parp4	88	42.945	Hippocampus_comes
ENSLACG00000005075	-	79	46.515	ENSIPUG00000003181	parp4	86	46.515	Ictalurus_punctatus
ENSLACG00000005075	-	64	56.522	ENSSTOG00000027869	PARP4	79	56.522	Ictidomys_tridecemlineatus
ENSLACG00000005075	-	59	46.842	ENSKMAG00000018334	parp4	97	46.842	Kryptolebias_marmoratus
ENSLACG00000005075	-	79	43.939	ENSLBEG00000013362	parp4	72	43.780	Labrus_bergylta
ENSLACG00000005075	-	86	47.531	ENSLOCG00000010789	parp4	88	47.752	Lepisosteus_oculatus
ENSLACG00000005075	-	71	50.162	ENSLAFG00000002022	-	99	52.709	Loxodonta_africana
ENSLACG00000005075	-	99	44.716	ENSMMUG00000012297	PARP4	82	54.268	Macaca_mulatta
ENSLACG00000005075	-	90	44.173	ENSMNEG00000044999	PARP4	80	54.268	Macaca_nemestrina
ENSLACG00000005075	-	99	45.103	ENSMLEG00000041053	PARP4	73	50.357	Mandrillus_leucophaeus
ENSLACG00000005075	-	65	45.489	ENSMAMG00000020871	parp4	91	45.489	Mastacembelus_armatus
ENSLACG00000005075	-	77	44.125	ENSMZEG00005014412	parp4	73	44.214	Maylandia_zebra
ENSLACG00000005075	-	79	60.145	ENSMGAG00000015136	PARP4	85	60.145	Meleagris_gallopavo
ENSLACG00000005075	-	71	49.643	ENSMICG00000028028	PARP4	82	49.643	Microcebus_murinus
ENSLACG00000005075	-	79	53.691	ENSMOCG00000016582	Parp4	77	53.691	Microtus_ochrogaster
ENSLACG00000005075	-	72	44.810	ENSMMOG00000019397	parp4	98	41.713	Mola_mola
ENSLACG00000005075	-	80	56.875	ENSMODG00000007894	PARP4	74	57.500	Monodelphis_domestica
ENSLACG00000005075	-	60	43.914	ENSMALG00000004027	parp4	98	43.914	Monopterus_albus
ENSLACG00000005075	-	80	53.333	MGP_CAROLIEiJ_G0019339	-	74	53.333	Mus_caroli
ENSLACG00000005075	-	80	53.333	ENSMUSG00000054509	Parp4	73	53.333	Mus_musculus
ENSLACG00000005075	-	80	53.333	MGP_PahariEiJ_G0030357	Parp4	71	53.333	Mus_pahari
ENSLACG00000005075	-	80	54.000	MGP_SPRETEiJ_G0020230	Parp4	70	54.000	Mus_spretus
ENSLACG00000005075	-	70	55.072	ENSMPUG00000013318	PARP4	77	55.072	Mustela_putorius_furo
ENSLACG00000005075	-	80	51.701	ENSMLUG00000003797	PARP4	81	51.701	Myotis_lucifugus
ENSLACG00000005075	-	79	51.351	ENSNGAG00000018396	Parp4	79	51.351	Nannospalax_galili
ENSLACG00000005075	-	51	86.441	ENSMEUG00000015644	-	75	86.441	Notamacropus_eugenii
ENSLACG00000005075	-	79	45.114	ENSONIG00000010261	parp4	78	45.114	Oreochromis_niloticus
ENSLACG00000005075	-	80	50.695	ENSOCUG00000014529	PARP4	76	50.695	Oryctolagus_cuniculus
ENSLACG00000005075	-	56	47.751	ENSORLG00000018162	parp4	87	47.751	Oryzias_latipes
ENSLACG00000005075	-	56	49.028	ENSORLG00020011392	parp4	87	49.028	Oryzias_latipes_hni
ENSLACG00000005075	-	70	46.417	ENSORLG00015007534	parp4	94	46.417	Oryzias_latipes_hsok
ENSLACG00000005075	-	75	48.272	ENSOMEG00000012305	parp4	88	48.171	Oryzias_melastigma
ENSLACG00000005075	-	82	54.000	ENSOGAG00000016230	PARP4	84	54.000	Otolemur_garnettii
ENSLACG00000005075	-	80	50.667	ENSOARG00000014415	PARP4	80	50.667	Ovis_aries
ENSLACG00000005075	-	99	45.455	ENSPPAG00000024134	PARP4	99	45.382	Pan_paniscus
ENSLACG00000005075	-	82	50.522	ENSPPRG00000009047	PARP4	83	50.522	Panthera_pardus
ENSLACG00000005075	-	99	45.532	ENSPTRG00000005711	PARP4	99	45.403	Pan_troglodytes
ENSLACG00000005075	-	99	45.077	ENSPANG00000006504	PARP4	73	50.357	Papio_anubis
ENSLACG00000005075	-	69	62.774	ENSPSIG00000014196	PARP4	80	62.774	Pelodiscus_sinensis
ENSLACG00000005075	-	66	45.335	ENSPMGG00000007212	parp4	92	45.335	Periophthalmus_magnuspinnatus
ENSLACG00000005075	-	80	53.247	ENSPEMG00000012639	Parp4	74	53.247	Peromyscus_maniculatus_bairdii
ENSLACG00000005075	-	55	38.197	ENSPMAG00000008938	-	99	38.197	Petromyzon_marinus
ENSLACG00000005075	-	75	53.704	ENSPCIG00000017800	-	99	53.957	Phascolarctos_cinereus
ENSLACG00000005075	-	78	48.889	ENSPFOG00000002081	parp4	99	44.698	Poecilia_formosa
ENSLACG00000005075	-	62	44.266	ENSPLAG00000019059	parp4	93	44.266	Poecilia_latipinna
ENSLACG00000005075	-	64	46.324	ENSPLAG00000021665	parp4	90	44.656	Poecilia_latipinna
ENSLACG00000005075	-	65	42.830	ENSPMEG00000016931	-	97	42.830	Poecilia_mexicana
ENSLACG00000005075	-	59	43.947	ENSPMEG00000017006	parp4	90	43.947	Poecilia_mexicana
ENSLACG00000005075	-	79	54.605	ENSPCOG00000022852	PARP4	91	54.605	Propithecus_coquereli
ENSLACG00000005075	-	77	51.235	ENSPVAG00000016461	PARP4	80	51.235	Pteropus_vampyrus
ENSLACG00000005075	-	76	44.409	ENSPNYG00000015691	parp4	70	44.471	Pundamilia_nyererei
ENSLACG00000005075	-	56	49.388	ENSPNAG00000019054	parp4	64	49.388	Pygocentrus_nattereri
ENSLACG00000005075	-	81	53.333	ENSRBIG00000040334	PARP4	82	53.333	Rhinopithecus_bieti
ENSLACG00000005075	-	81	53.333	ENSRROG00000040417	PARP4	82	53.333	Rhinopithecus_roxellana
ENSLACG00000005075	-	69	54.762	ENSSDUG00000014635	parp4	92	52.273	Seriola_dumerili
ENSLACG00000005075	-	74	45.092	ENSSLDG00000022915	parp4	76	44.858	Seriola_lalandi_dorsalis
ENSLACG00000005075	-	68	43.126	ENSSPAG00000010424	parp4	91	43.126	Stegastes_partitus
ENSLACG00000005075	-	81	49.038	ENSSSCG00000022957	PARP4	75	48.574	Sus_scrofa
ENSLACG00000005075	-	79	44.667	ENSTNIG00000015654	parp4	99	43.669	Tetraodon_nigroviridis
ENSLACG00000005075	-	63	44.484	ENSUAMG00000027134	-	95	46.117	Ursus_americanus
ENSLACG00000005075	-	80	53.289	ENSUMAG00000013978	PARP4	81	53.289	Ursus_maritimus
ENSLACG00000005075	-	99	43.401	ENSVVUG00000006363	PARP4	72	49.716	Vulpes_vulpes
ENSLACG00000005075	-	71	45.857	ENSXETG00000002639	-	97	45.614	Xenopus_tropicalis