EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005078 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1305 bases
Position: chrJH129898.1:150930-152234
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005715	zf-CCHC	PF00098.23	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005764	-	912	-	ENSLACP00000005715	304 (aa)	-	H3A7U4

Gene Model

Click here to download ENSLACG00000005078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005078's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005078	-	100	54.630	ENSLACG00000002057	-	90	54.630
ENSLACG00000005078	-	100	65.152	ENSLACG00000000325	-	89	67.834
ENSLACG00000005078	-	96	59.801	ENSLACG00000010543	-	100	59.801
ENSLACG00000005078	-	79	70.301	ENSLACG00000012373	-	81	73.600
ENSLACG00000005078	-	99	56.766	ENSLACG00000002363	-	74	56.766
ENSLACG00000005078	-	100	57.605	ENSLACG00000008039	-	90	57.605
ENSLACG00000005078	-	100	71.895	ENSLACG00000002768	-	80	71.895
ENSLACG00000005078	-	100	55.663	ENSLACG00000004689	-	85	55.663
ENSLACG00000005078	-	96	65.116	ENSLACG00000004531	-	89	65.116
ENSLACG00000005078	-	98	66.124	ENSLACG00000017942	-	89	66.124
ENSLACG00000005078	-	96	56.452	ENSLACG00000012908	-	100	56.452
ENSLACG00000005078	-	96	57.143	ENSLACG00000004000	-	89	57.823
ENSLACG00000005078	-	99	73.179	ENSLACG00000006128	-	90	73.179
ENSLACG00000005078	-	99	50.165	ENSLACG00000002836	-	89	50.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005078	-	83	48.746	ENSCPBG00000028243	-	90	48.029	Chrysemys_picta_bellii
ENSLACG00000005078	-	61	44.500	ENSGAGG00000002892	-	92	44.500	Gopherus_agassizii
ENSLACG00000005078	-	100	50.974	ENSXETG00000006819	-	69	50.814	Xenopus_tropicalis
ENSLACG00000005078	-	100	50.649	ENSXETG00000005082	ankrd31	75	50.489	Xenopus_tropicalis
ENSLACG00000005078	-	100	49.679	ENSXETG00000026538	-	74	49.518	Xenopus_tropicalis
ENSLACG00000005078	-	100	50.962	ENSXETG00000019379	-	75	51.140	Xenopus_tropicalis