EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005109 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 34072 bases
Position: chrJH126786.1:152337-186408
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005756	zf-met	PF12874.7	8e-15	1	2
ENSLACP00000005756	zf-met	PF12874.7	8e-15	2	2
ENSLACP00000005755	zf-met	PF12874.7	8.3e-15	1	2
ENSLACP00000005755	zf-met	PF12874.7	8.3e-15	2	2
ENSLACP00000005755	zf-C2H2_jaz	PF12171.8	6.7e-10	1	1
ENSLACP00000005756	zf-C2H2_jaz	PF12171.8	7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005805	-	459	-	ENSLACP00000005755	153 (aa)	-	H3A7Y4
ENSLACT00000005806	-	441	-	ENSLACP00000005756	147 (aa)	-	H3A7Y5

Gene Model

Click here to download ENSLACG00000005109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005109	-	98	46.259	ENSLACG00000007897	ZNF346	81	51.667
ENSLACG00000005109	-	96	51.678	ENSLACG00000006206	-	74	51.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005109	-	96	54.362	ENSG00000165061	ZMAT4	69	54.362	Homo_sapiens
ENSLACG00000005109	-	91	56.618	ENSAPOG00000007448	zmat4a	70	56.618	Acanthochromis_polyacanthus
ENSLACG00000005109	-	96	54.730	ENSAMEG00000002758	ZMAT4	65	54.730	Ailuropoda_melanoleuca
ENSLACG00000005109	-	92	55.072	ENSACIG00000009080	zmat4a	60	55.072	Amphilophus_citrinellus
ENSLACG00000005109	-	92	55.797	ENSAOCG00000004416	zmat4a	53	55.797	Amphiprion_ocellaris
ENSLACG00000005109	-	92	55.072	ENSAPEG00000018565	zmat4a	53	55.072	Amphiprion_percula
ENSLACG00000005109	-	92	54.545	ENSATEG00000012630	zmat4a	52	54.545	Anabas_testudineus
ENSLACG00000005109	-	96	54.795	ENSAPLG00000006106	ZMAT4	64	54.795	Anas_platyrhynchos
ENSLACG00000005109	-	86	59.091	ENSACAG00000005388	ZMAT4	62	59.091	Anolis_carolinensis
ENSLACG00000005109	-	96	54.362	ENSANAG00000027926	ZMAT4	64	54.362	Aotus_nancymaae
ENSLACG00000005109	-	92	55.245	ENSACLG00000005038	zmat4a	61	55.245	Astatotilapia_calliptera
ENSLACG00000005109	-	92	57.143	ENSAMXG00000035337	zmat4a	61	57.143	Astyanax_mexicanus
ENSLACG00000005109	-	96	54.730	ENSBTAG00000017420	ZMAT4	64	54.730	Bos_taurus
ENSLACG00000005109	-	96	54.730	ENSCAFG00000005744	ZMAT4	64	54.730	Canis_familiaris
ENSLACG00000005109	-	96	54.730	ENSCAFG00020002716	ZMAT4	85	54.730	Canis_lupus_dingo
ENSLACG00000005109	-	96	54.730	ENSCHIG00000022017	ZMAT4	65	54.730	Capra_hircus
ENSLACG00000005109	-	96	54.362	ENSTSYG00000031413	ZMAT4	88	54.362	Carlito_syrichta
ENSLACG00000005109	-	96	53.020	ENSCAPG00000014401	ZMAT4	64	53.020	Cavia_aperea
ENSLACG00000005109	-	96	53.020	ENSCPOG00000015224	ZMAT4	64	53.020	Cavia_porcellus
ENSLACG00000005109	-	96	54.362	ENSCCAG00000027437	ZMAT4	64	54.362	Cebus_capucinus
ENSLACG00000005109	-	96	54.362	ENSCATG00000044978	ZMAT4	64	54.362	Cercocebus_atys
ENSLACG00000005109	-	96	54.054	ENSCLAG00000000923	ZMAT4	88	54.545	Chinchilla_lanigera
ENSLACG00000005109	-	96	54.362	ENSCSAG00000015108	ZMAT4	65	54.362	Chlorocebus_sabaeus
ENSLACG00000005109	-	96	54.362	ENSCANG00000032136	ZMAT4	75	54.362	Colobus_angolensis_palliatus
ENSLACG00000005109	-	96	52.055	ENSCGRG00001016583	Zmat4	64	52.055	Cricetulus_griseus_chok1gshd
ENSLACG00000005109	-	96	52.055	ENSCGRG00000002696	Zmat4	64	52.055	Cricetulus_griseus_crigri
ENSLACG00000005109	-	92	55.245	ENSCSEG00000013707	zmat4a	59	55.245	Cynoglossus_semilaevis
ENSLACG00000005109	-	92	55.034	ENSCVAG00000000113	zmat4a	53	55.034	Cyprinodon_variegatus
ENSLACG00000005109	-	92	56.643	ENSDARG00000092987	zmat4a	62	55.396	Danio_rerio
ENSLACG00000005109	-	92	51.429	ENSDARG00000061419	zmat4b	66	53.125	Danio_rerio
ENSLACG00000005109	-	96	53.425	ENSDNOG00000001045	ZMAT4	90	59.542	Dasypus_novemcinctus
ENSLACG00000005109	-	96	55.405	ENSDORG00000009300	Zmat4	64	55.405	Dipodomys_ordii
ENSLACG00000005109	-	85	58.462	ENSETEG00000010474	ZMAT4	65	58.915	Echinops_telfairi
ENSLACG00000005109	-	96	55.405	ENSEASG00005010447	ZMAT4	64	55.405	Equus_asinus_asinus
ENSLACG00000005109	-	96	55.405	ENSECAG00000021550	ZMAT4	64	55.405	Equus_caballus
ENSLACG00000005109	-	92	56.429	ENSEEUG00000002565	ZMAT4	63	56.429	Erinaceus_europaeus
ENSLACG00000005109	-	92	55.944	ENSELUG00000005097	zmat4a	62	55.245	Esox_lucius
ENSLACG00000005109	-	96	55.405	ENSFCAG00000012775	ZMAT4	65	55.405	Felis_catus
ENSLACG00000005109	-	96	51.678	ENSFALG00000006455	ZMAT4	63	51.678	Ficedula_albicollis
ENSLACG00000005109	-	96	51.370	ENSFDAG00000015258	ZMAT4	62	51.370	Fukomys_damarensis
ENSLACG00000005109	-	92	52.448	ENSFHEG00000022872	zmat4b	54	58.779	Fundulus_heteroclitus
ENSLACG00000005109	-	92	55.072	ENSGMOG00000007950	zmat4a	62	55.072	Gadus_morhua
ENSLACG00000005109	-	96	53.595	ENSGALG00000003470	ZMAT4	64	53.595	Gallus_gallus
ENSLACG00000005109	-	92	53.846	ENSGAFG00000013149	zmat4a	58	54.478	Gambusia_affinis
ENSLACG00000005109	-	91	54.745	ENSGACG00000005515	zmat4a	76	54.745	Gasterosteus_aculeatus
ENSLACG00000005109	-	96	54.795	ENSGAGG00000004799	ZMAT4	64	54.795	Gopherus_agassizii
ENSLACG00000005109	-	96	54.362	ENSGGOG00000006633	ZMAT4	64	54.362	Gorilla_gorilla
ENSLACG00000005109	-	92	55.245	ENSHBUG00000012634	zmat4a	53	55.245	Haplochromis_burtoni
ENSLACG00000005109	-	96	53.378	ENSHGLG00000003246	ZMAT4	64	53.378	Heterocephalus_glaber_female
ENSLACG00000005109	-	88	56.716	ENSHGLG00100000081	ZMAT4	83	57.143	Heterocephalus_glaber_male
ENSLACG00000005109	-	92	55.944	ENSIPUG00000022248	zmat4	62	53.425	Ictalurus_punctatus
ENSLACG00000005109	-	52	53.165	ENSSTOG00000026946	-	73	51.220	Ictidomys_tridecemlineatus
ENSLACG00000005109	-	90	54.545	ENSJJAG00000013484	Zmat4	62	54.545	Jaculus_jaculus
ENSLACG00000005109	-	92	55.797	ENSLOCG00000015435	zmat4b	61	55.797	Lepisosteus_oculatus
ENSLACG00000005109	-	96	54.362	ENSLAFG00000014753	ZMAT4	65	54.362	Loxodonta_africana
ENSLACG00000005109	-	96	54.362	ENSMFAG00000043475	ZMAT4	62	56.835	Macaca_fascicularis
ENSLACG00000005109	-	96	54.362	ENSMMUG00000000776	ZMAT4	75	54.362	Macaca_mulatta
ENSLACG00000005109	-	96	54.362	ENSMNEG00000042102	ZMAT4	64	54.362	Macaca_nemestrina
ENSLACG00000005109	-	96	54.362	ENSMLEG00000034448	ZMAT4	64	54.362	Mandrillus_leucophaeus
ENSLACG00000005109	-	92	54.676	ENSMAMG00000019914	zmat4a	50	54.676	Mastacembelus_armatus
ENSLACG00000005109	-	92	55.245	ENSMZEG00005004946	zmat4a	53	55.245	Maylandia_zebra
ENSLACG00000005109	-	96	51.370	ENSMGAG00000002288	ZMAT4	63	51.370	Meleagris_gallopavo
ENSLACG00000005109	-	63	43.617	ENSMAUG00000017272	-	84	43.617	Mesocricetus_auratus
ENSLACG00000005109	-	95	54.422	ENSMICG00000047837	ZMAT4	74	54.422	Microcebus_murinus
ENSLACG00000005109	-	95	53.103	ENSMOCG00000015996	Zmat4	63	53.103	Microtus_ochrogaster
ENSLACG00000005109	-	92	56.738	ENSMMOG00000012619	zmat4a	51	56.738	Mola_mola
ENSLACG00000005109	-	96	50.676	ENSMODG00000010499	ZMAT4	74	50.676	Monodelphis_domestica
ENSLACG00000005109	-	92	54.545	ENSMALG00000015056	zmat4a	53	54.545	Monopterus_albus
ENSLACG00000005109	-	90	54.610	MGP_CAROLIEiJ_G0030909	Zmat4	63	54.610	Mus_caroli
ENSLACG00000005109	-	90	54.610	ENSMUSG00000037492	Zmat4	85	55.147	Mus_musculus
ENSLACG00000005109	-	90	54.610	MGP_PahariEiJ_G0021380	Zmat4	63	54.610	Mus_pahari
ENSLACG00000005109	-	90	54.610	MGP_SPRETEiJ_G0032028	Zmat4	63	54.610	Mus_spretus
ENSLACG00000005109	-	96	54.730	ENSMPUG00000005832	ZMAT4	52	54.730	Mustela_putorius_furo
ENSLACG00000005109	-	82	58.065	ENSMLUG00000014209	ZMAT4	93	58.065	Myotis_lucifugus
ENSLACG00000005109	-	96	55.405	ENSNGAG00000015545	Zmat4	64	55.405	Nannospalax_galili
ENSLACG00000005109	-	92	55.862	ENSNBRG00000011844	zmat4a	62	55.862	Neolamprologus_brichardi
ENSLACG00000005109	-	96	54.362	ENSNLEG00000012564	ZMAT4	64	54.362	Nomascus_leucogenys
ENSLACG00000005109	-	96	50.000	ENSMEUG00000000558	ZMAT4	65	50.000	Notamacropus_eugenii
ENSLACG00000005109	-	96	55.405	ENSOPRG00000009257	ZMAT4	64	55.405	Ochotona_princeps
ENSLACG00000005109	-	96	52.055	ENSODEG00000006439	ZMAT4	64	52.055	Octodon_degus
ENSLACG00000005109	-	92	55.782	ENSONIG00000016086	zmat4a	76	55.782	Oreochromis_niloticus
ENSLACG00000005109	-	96	55.405	ENSOCUG00000000977	ZMAT4	64	55.405	Oryctolagus_cuniculus
ENSLACG00000005109	-	58	54.118	ENSORLG00000016169	zmat4b	53	54.118	Oryzias_latipes
ENSLACG00000005109	-	92	56.463	ENSORLG00020019602	zmat4a	60	56.463	Oryzias_latipes_hni
ENSLACG00000005109	-	92	56.463	ENSORLG00015009006	zmat4a	60	56.463	Oryzias_latipes_hsok
ENSLACG00000005109	-	92	53.472	ENSOMEG00000003441	zmat4a	52	55.319	Oryzias_melastigma
ENSLACG00000005109	-	95	53.378	ENSOGAG00000012558	ZMAT4	62	56.738	Otolemur_garnettii
ENSLACG00000005109	-	96	54.730	ENSOARG00000002354	ZMAT4	55	54.730	Ovis_aries
ENSLACG00000005109	-	96	54.362	ENSPPAG00000042573	ZMAT4	65	54.362	Pan_paniscus
ENSLACG00000005109	-	96	54.054	ENSPPRG00000007023	ZMAT4	64	54.054	Panthera_pardus
ENSLACG00000005109	-	96	54.054	ENSPTIG00000019738	ZMAT4	64	54.054	Panthera_tigris_altaica
ENSLACG00000005109	-	96	54.362	ENSPTRG00000020191	ZMAT4	64	54.362	Pan_troglodytes
ENSLACG00000005109	-	96	54.362	ENSPANG00000014196	ZMAT4	64	54.362	Papio_anubis
ENSLACG00000005109	-	69	44.340	ENSPKIG00000021792	zmat4b	54	44.340	Paramormyrops_kingsleyae
ENSLACG00000005109	-	92	55.245	ENSPKIG00000000048	zmat4a	53	55.245	Paramormyrops_kingsleyae
ENSLACG00000005109	-	96	54.795	ENSPSIG00000004847	ZMAT4	64	54.795	Pelodiscus_sinensis
ENSLACG00000005109	-	90	52.985	ENSPMGG00000001436	zmat4b	55	52.985	Periophthalmus_magnuspinnatus
ENSLACG00000005109	-	75	52.679	ENSPMAG00000004582	zmat4a	68	52.679	Petromyzon_marinus
ENSLACG00000005109	-	85	56.923	ENSPCIG00000028706	ZMAT4	52	56.923	Phascolarctos_cinereus
ENSLACG00000005109	-	92	53.846	ENSPFOG00000006742	zmat4a	52	55.556	Poecilia_formosa
ENSLACG00000005109	-	92	55.556	ENSPLAG00000019268	zmat4a	65	55.556	Poecilia_latipinna
ENSLACG00000005109	-	92	53.846	ENSPMEG00000007870	zmat4a	60	53.846	Poecilia_mexicana
ENSLACG00000005109	-	92	53.846	ENSPREG00000014914	zmat4a	52	55.556	Poecilia_reticulata
ENSLACG00000005109	-	96	54.362	ENSPPYG00000018540	ZMAT4	64	54.362	Pongo_abelii
ENSLACG00000005109	-	96	54.730	ENSPCAG00000004820	ZMAT4	64	54.730	Procavia_capensis
ENSLACG00000005109	-	96	55.405	ENSPCOG00000007717	ZMAT4	64	55.405	Propithecus_coquereli
ENSLACG00000005109	-	85	56.154	ENSPVAG00000011393	ZMAT4	55	56.693	Pteropus_vampyrus
ENSLACG00000005109	-	92	51.748	ENSPNAG00000023764	zmat4b	61	51.748	Pygocentrus_nattereri
ENSLACG00000005109	-	92	57.343	ENSPNAG00000009604	zmat4a	53	57.343	Pygocentrus_nattereri
ENSLACG00000005109	-	91	50.000	ENSRNOG00000042690	Zmat4	62	50.000	Rattus_norvegicus
ENSLACG00000005109	-	96	54.362	ENSRBIG00000031887	ZMAT4	64	54.362	Rhinopithecus_bieti
ENSLACG00000005109	-	96	54.362	ENSRROG00000040877	ZMAT4	64	54.362	Rhinopithecus_roxellana
ENSLACG00000005109	-	96	54.362	ENSSBOG00000017391	ZMAT4	64	54.362	Saimiri_boliviensis_boliviensis
ENSLACG00000005109	-	96	44.767	ENSSHAG00000011847	ZMAT4	82	44.767	Sarcophilus_harrisii
ENSLACG00000005109	-	85	57.252	ENSSFOG00015013158	zmat4	53	56.061	Scleropages_formosus
ENSLACG00000005109	-	92	55.797	ENSSMAG00000017693	zmat4a	62	55.714	Scophthalmus_maximus
ENSLACG00000005109	-	92	55.797	ENSSDUG00000005878	zmat4a	53	55.797	Seriola_dumerili
ENSLACG00000005109	-	92	55.797	ENSSLDG00000012934	zmat4a	53	55.797	Seriola_lalandi_dorsalis
ENSLACG00000005109	-	84	58.915	ENSSARG00000003679	ZMAT4	56	58.915	Sorex_araneus
ENSLACG00000005109	-	92	55.319	ENSSPAG00000021408	zmat4a	51	55.319	Stegastes_partitus
ENSLACG00000005109	-	96	56.081	ENSSSCG00000007010	ZMAT4	64	56.081	Sus_scrofa
ENSLACG00000005109	-	96	51.678	ENSTGUG00000005159	ZMAT4	65	51.678	Taeniopygia_guttata
ENSLACG00000005109	-	79	56.557	ENSTNIG00000018863	zmat4b	53	57.500	Tetraodon_nigroviridis
ENSLACG00000005109	-	95	54.422	ENSTBEG00000016172	ZMAT4	63	54.422	Tupaia_belangeri
ENSLACG00000005109	-	96	52.027	ENSTTRG00000009606	ZMAT4	64	52.027	Tursiops_truncatus
ENSLACG00000005109	-	96	54.730	ENSUMAG00000025578	ZMAT4	65	54.730	Ursus_maritimus
ENSLACG00000005109	-	96	54.730	ENSVPAG00000009783	ZMAT4	64	54.730	Vicugna_pacos
ENSLACG00000005109	-	96	54.730	ENSVVUG00000020407	ZMAT4	64	54.730	Vulpes_vulpes
ENSLACG00000005109	-	76	40.833	ENSXCOG00000010189	-	53	39.535	Xiphophorus_couchianus
ENSLACG00000005109	-	92	53.846	ENSXMAG00000010461	zmat4a	52	55.556	Xiphophorus_maculatus