EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005123 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2920 bases
Position: chrJH128414.1:152876-155795
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005771	RVT_1	PF00078.27	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005821	-	2265	-	ENSLACP00000005771	755 (aa)	-	H3A800

Gene Model

Click here to download ENSLACG00000005123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005123	-	88	51.389	ENSLACG00000002477	-	83	51.389
ENSLACG00000005123	-	91	84.504	ENSLACG00000015903	-	90	84.504
ENSLACG00000005123	-	70	30.075	ENSLACG00000001468	-	63	30.075
ENSLACG00000005123	-	76	87.500	ENSLACG00000007383	-	83	87.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005123	-	92	37.134	ENSORLG00000030578	-	79	37.134	Oryzias_latipes
ENSLACG00000005123	-	92	37.134	ENSORLG00000030308	-	79	37.134	Oryzias_latipes
ENSLACG00000005123	-	97	42.718	ENSORLG00015002919	-	74	42.718	Oryzias_latipes_hsok
ENSLACG00000005123	-	92	37.134	ENSORLG00015013910	-	85	37.134	Oryzias_latipes_hsok
ENSLACG00000005123	-	74	45.946	ENSPSIG00000000104	-	81	45.946	Pelodiscus_sinensis
ENSLACG00000005123	-	98	51.815	ENSPSIG00000001183	-	74	51.815	Pelodiscus_sinensis
ENSLACG00000005123	-	51	43.284	ENSPSIG00000001221	-	85	43.284	Pelodiscus_sinensis
ENSLACG00000005123	-	61	30.864	ENSPSIG00000001022	-	73	30.864	Pelodiscus_sinensis
ENSLACG00000005123	-	52	44.118	ENSPSIG00000000044	-	85	44.118	Pelodiscus_sinensis
ENSLACG00000005123	-	64	43.511	ENSPSIG00000000041	-	87	43.511	Pelodiscus_sinensis
ENSLACG00000005123	-	90	50.741	ENSPSIG00000001155	-	83	50.741	Pelodiscus_sinensis
ENSLACG00000005123	-	72	35.185	ENSPSIG00000001059	-	85	35.185	Pelodiscus_sinensis
ENSLACG00000005123	-	95	51.815	ENSPSIG00000000229	-	74	51.815	Pelodiscus_sinensis
ENSLACG00000005123	-	95	51.815	ENSPSIG00000001896	-	74	51.815	Pelodiscus_sinensis
ENSLACG00000005123	-	52	44.286	ENSPSIG00000001231	-	86	44.286	Pelodiscus_sinensis
ENSLACG00000005123	-	52	45.070	ENSPSIG00000001486	-	85	45.070	Pelodiscus_sinensis
ENSLACG00000005123	-	71	51.316	ENSPSIG00000000618	-	79	51.316	Pelodiscus_sinensis
ENSLACG00000005123	-	98	51.815	ENSPSIG00000000630	-	74	51.815	Pelodiscus_sinensis
ENSLACG00000005123	-	52	45.070	ENSPSIG00000000993	-	82	45.070	Pelodiscus_sinensis
ENSLACG00000005123	-	52	44.604	ENSPSIG00000001353	-	86	44.604	Pelodiscus_sinensis
ENSLACG00000005123	-	65	45.070	ENSPSIG00000001546	-	87	45.070	Pelodiscus_sinensis
ENSLACG00000005123	-	58	51.815	ENSPSIG00000015886	-	67	51.815	Pelodiscus_sinensis