EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005234 (Gene tree)
Gene ID: 102350714
Gene Symbol: SLTM
Alias: FLJ13213|Met
Full Name: SAFB like transcription modulator
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 54435 bases
Position: chrJH127034.1:158397-212831
Accession: 102350714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005894	RRM_5	PF13893.6	6e-08	1	1
ENSLACP00000005895	RRM_5	PF13893.6	6e-08	1	1
ENSLACP00000005894	RRM_1	PF00076.22	6e-11	1	1
ENSLACP00000005895	RRM_1	PF00076.22	6.1e-11	1	1
ENSLACP00000005895	SAP	PF02037.27	3.6e-10	1	1
ENSLACP00000005894	SAP	PF02037.27	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005946	SLTM-201	3192	XM_005998726	ENSLACP00000005894	1042 (aa)	XP_005998788	H3A8C3
ENSLACT00000005947	SLTM-202	3141	-	ENSLACP00000005895	1046 (aa)	-	H3A8C4

Gene Model

Click here to download ENSLACG00000005234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005234	SLTM	76	40.462	ENSLACG00000018090	SAFB	85	40.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005234	SLTM	99	65.684	ENSG00000137776	SLTM	99	72.072	Homo_sapiens
ENSLACG00000005234	SLTM	100	49.954	ENSAPOG00000012346	sltm	100	50.971	Acanthochromis_polyacanthus
ENSLACG00000005234	SLTM	96	64.561	ENSAMEG00000004537	SLTM	100	65.582	Ailuropoda_melanoleuca
ENSLACG00000005234	SLTM	100	49.307	ENSACIG00000001971	sltm	100	49.677	Amphilophus_citrinellus
ENSLACG00000005234	SLTM	100	49.631	ENSAOCG00000002747	sltm	100	50.368	Amphiprion_ocellaris
ENSLACG00000005234	SLTM	100	50.000	ENSAPEG00000012366	sltm	100	50.369	Amphiprion_percula
ENSLACG00000005234	SLTM	99	50.369	ENSATEG00000003763	sltm	99	51.526	Anabas_testudineus
ENSLACG00000005234	SLTM	96	65.316	ENSAPLG00000013025	SLTM	58	62.349	Anas_platyrhynchos
ENSLACG00000005234	SLTM	99	61.690	ENSACAG00000015120	SLTM	99	61.776	Anolis_carolinensis
ENSLACG00000005234	SLTM	99	65.396	ENSANAG00000037031	SLTM	99	65.755	Aotus_nancymaae
ENSLACG00000005234	SLTM	100	49.036	ENSACLG00000002523	sltm	100	51.105	Astatotilapia_calliptera
ENSLACG00000005234	SLTM	78	55.530	ENSAMXG00000012409	sltm	96	52.222	Astyanax_mexicanus
ENSLACG00000005234	SLTM	91	64.100	ENSBTAG00000011319	SLTM	96	64.315	Bos_taurus
ENSLACG00000005234	SLTM	99	64.919	ENSCJAG00000020395	SLTM	99	65.468	Callithrix_jacchus
ENSLACG00000005234	SLTM	99	63.923	ENSCAFG00000016586	SLTM	99	64.739	Canis_familiaris
ENSLACG00000005234	SLTM	99	64.190	ENSCAFG00020011253	SLTM	99	64.689	Canis_lupus_dingo
ENSLACG00000005234	SLTM	99	64.599	ENSCHIG00000008780	SLTM	99	64.700	Capra_hircus
ENSLACG00000005234	SLTM	96	64.526	ENSTSYG00000013581	SLTM	95	64.828	Carlito_syrichta
ENSLACG00000005234	SLTM	69	61.241	ENSCAPG00000013326	SLTM	80	61.826	Cavia_aperea
ENSLACG00000005234	SLTM	89	65.031	ENSCPOG00000026109	SLTM	100	64.888	Cavia_porcellus
ENSLACG00000005234	SLTM	99	65.396	ENSCCAG00000022982	SLTM	99	65.755	Cebus_capucinus
ENSLACG00000005234	SLTM	99	65.589	ENSCATG00000030254	SLTM	99	66.038	Cercocebus_atys
ENSLACG00000005234	SLTM	92	62.320	ENSCLAG00000007160	SLTM	100	63.153	Chinchilla_lanigera
ENSLACG00000005234	SLTM	99	65.494	ENSCSAG00000012004	SLTM	99	66.038	Chlorocebus_sabaeus
ENSLACG00000005234	SLTM	75	67.222	ENSCHOG00000001125	SLTM	93	65.982	Choloepus_hoffmanni
ENSLACG00000005234	SLTM	89	78.652	ENSCPBG00000006045	SLTM	98	75.000	Chrysemys_picta_bellii
ENSLACG00000005234	SLTM	96	64.921	ENSCANG00000043731	SLTM	100	65.453	Colobus_angolensis_palliatus
ENSLACG00000005234	SLTM	99	64.137	ENSCGRG00001022009	Sltm	99	64.373	Cricetulus_griseus_chok1gshd
ENSLACG00000005234	SLTM	96	63.547	ENSCGRG00000014806	Sltm	100	63.878	Cricetulus_griseus_crigri
ENSLACG00000005234	SLTM	96	48.987	ENSCSEG00000001618	sltm	59	44.961	Cynoglossus_semilaevis
ENSLACG00000005234	SLTM	99	53.904	ENSDARG00000052728	sltm	94	66.288	Danio_rerio
ENSLACG00000005234	SLTM	99	64.259	ENSDNOG00000002975	SLTM	99	65.217	Dasypus_novemcinctus
ENSLACG00000005234	SLTM	77	64.722	ENSDORG00000007463	Sltm	89	64.722	Dipodomys_ordii
ENSLACG00000005234	SLTM	55	59.386	ENSETEG00000008003	SLTM	58	59.552	Echinops_telfairi
ENSLACG00000005234	SLTM	99	65.586	ENSEASG00005006792	SLTM	99	66.383	Equus_asinus_asinus
ENSLACG00000005234	SLTM	99	65.586	ENSECAG00000011267	SLTM	99	66.383	Equus_caballus
ENSLACG00000005234	SLTM	87	65.408	ENSEEUG00000000580	SLTM	91	65.408	Erinaceus_europaeus
ENSLACG00000005234	SLTM	98	53.931	ENSELUG00000013388	sltm	94	53.682	Esox_lucius
ENSLACG00000005234	SLTM	99	65.396	ENSFCAG00000004826	SLTM	99	65.755	Felis_catus
ENSLACG00000005234	SLTM	96	65.678	ENSFALG00000012285	SLTM	58	61.831	Ficedula_albicollis
ENSLACG00000005234	SLTM	96	63.645	ENSFDAG00000018075	SLTM	100	64.335	Fukomys_damarensis
ENSLACG00000005234	SLTM	76	45.473	ENSFHEG00000014764	sltm	89	44.016	Fundulus_heteroclitus
ENSLACG00000005234	SLTM	59	75.556	ENSGMOG00000015455	sltm	71	67.857	Gadus_morhua
ENSLACG00000005234	SLTM	100	50.756	ENSGACG00000015814	sltm	99	50.945	Gasterosteus_aculeatus
ENSLACG00000005234	SLTM	99	67.393	ENSGAGG00000021279	SLTM	98	73.469	Gopherus_agassizii
ENSLACG00000005234	SLTM	99	65.684	ENSGGOG00000015866	SLTM	99	66.226	Gorilla_gorilla
ENSLACG00000005234	SLTM	100	49.036	ENSHBUG00000012461	sltm	100	51.105	Haplochromis_burtoni
ENSLACG00000005234	SLTM	100	63.876	ENSHGLG00000018512	-	100	64.252	Heterocephalus_glaber_female
ENSLACG00000005234	SLTM	99	53.125	ENSHGLG00000015426	-	62	56.556	Heterocephalus_glaber_female
ENSLACG00000005234	SLTM	99	55.545	ENSHGLG00100001757	-	61	56.082	Heterocephalus_glaber_male
ENSLACG00000005234	SLTM	99	50.285	ENSHGLG00100002576	-	62	52.215	Heterocephalus_glaber_male
ENSLACG00000005234	SLTM	100	59.812	ENSHGLG00100002674	-	61	58.675	Heterocephalus_glaber_male
ENSLACG00000005234	SLTM	99	41.601	ENSHCOG00000003395	sltm	94	41.689	Hippocampus_comes
ENSLACG00000005234	SLTM	99	50.982	ENSIPUG00000023201	sltm	92	52.198	Ictalurus_punctatus
ENSLACG00000005234	SLTM	96	65.222	ENSSTOG00000000584	SLTM	100	65.551	Ictidomys_tridecemlineatus
ENSLACG00000005234	SLTM	99	63.636	ENSJJAG00000006970	Sltm	99	64.238	Jaculus_jaculus
ENSLACG00000005234	SLTM	99	47.240	ENSKMAG00000007570	sltm	62	42.406	Kryptolebias_marmoratus
ENSLACG00000005234	SLTM	83	47.983	ENSLBEG00000025472	sltm	60	44.012	Labrus_bergylta
ENSLACG00000005234	SLTM	100	59.095	ENSLOCG00000013629	sltm	60	55.397	Lepisosteus_oculatus
ENSLACG00000005234	SLTM	99	64.259	ENSLAFG00000017922	SLTM	99	64.286	Loxodonta_africana
ENSLACG00000005234	SLTM	99	65.589	ENSMFAG00000033354	SLTM	99	66.132	Macaca_fascicularis
ENSLACG00000005234	SLTM	99	65.589	ENSMMUG00000022200	SLTM	94	71.429	Macaca_mulatta
ENSLACG00000005234	SLTM	99	65.399	ENSMNEG00000025105	SLTM	99	65.943	Macaca_nemestrina
ENSLACG00000005234	SLTM	99	65.777	ENSMLEG00000043355	SLTM	99	66.038	Mandrillus_leucophaeus
ENSLACG00000005234	SLTM	99	49.814	ENSMAMG00000021391	sltm	99	50.841	Mastacembelus_armatus
ENSLACG00000005234	SLTM	100	49.036	ENSMZEG00005013839	sltm	100	51.105	Maylandia_zebra
ENSLACG00000005234	SLTM	97	63.883	ENSMGAG00000005313	SLTM	59	59.328	Meleagris_gallopavo
ENSLACG00000005234	SLTM	89	74.627	ENSMAUG00000014391	Sltm	99	71.233	Mesocricetus_auratus
ENSLACG00000005234	SLTM	99	65.304	ENSMICG00000013069	SLTM	99	65.443	Microcebus_murinus
ENSLACG00000005234	SLTM	99	64.571	ENSMOCG00000012419	Sltm	99	64.650	Microtus_ochrogaster
ENSLACG00000005234	SLTM	83	50.704	ENSMMOG00000016470	sltm	57	43.879	Mola_mola
ENSLACG00000005234	SLTM	99	63.619	ENSMODG00000008794	-	99	63.390	Monodelphis_domestica
ENSLACG00000005234	SLTM	99	50.000	ENSMALG00000021474	sltm	99	51.210	Monopterus_albus
ENSLACG00000005234	SLTM	60	61.146	ENSMUSG00000032212	Sltm	99	63.267	Mus_musculus
ENSLACG00000005234	SLTM	97	64.300	ENSMPUG00000004229	SLTM	100	63.492	Mustela_putorius_furo
ENSLACG00000005234	SLTM	96	63.018	ENSMLUG00000000742	SLTM	100	63.851	Myotis_lucifugus
ENSLACG00000005234	SLTM	99	64.645	ENSNGAG00000012328	Sltm	99	64.962	Nannospalax_galili
ENSLACG00000005234	SLTM	100	48.735	ENSNBRG00000010183	sltm	59	45.166	Neolamprologus_brichardi
ENSLACG00000005234	SLTM	99	65.589	ENSNLEG00000011440	SLTM	99	66.132	Nomascus_leucogenys
ENSLACG00000005234	SLTM	99	56.885	ENSMEUG00000015230	SLTM	59	55.063	Notamacropus_eugenii
ENSLACG00000005234	SLTM	96	62.083	ENSODEG00000017077	SLTM	99	62.586	Octodon_degus
ENSLACG00000005234	SLTM	100	49.767	ENSONIG00000005838	sltm	100	50.645	Oreochromis_niloticus
ENSLACG00000005234	SLTM	97	57.339	ENSOCUG00000003327	SLTM	99	69.630	Oryctolagus_cuniculus
ENSLACG00000005234	SLTM	99	46.298	ENSORLG00000008161	sltm	99	46.442	Oryzias_latipes
ENSLACG00000005234	SLTM	99	46.536	ENSORLG00020008903	sltm	99	47.009	Oryzias_latipes_hni
ENSLACG00000005234	SLTM	99	46.348	ENSORLG00015007103	sltm	99	47.009	Oryzias_latipes_hsok
ENSLACG00000005234	SLTM	80	49.363	ENSOMEG00000002041	sltm	97	47.578	Oryzias_melastigma
ENSLACG00000005234	SLTM	99	64.360	ENSOGAG00000011297	SLTM	99	64.911	Otolemur_garnettii
ENSLACG00000005234	SLTM	99	64.896	ENSOARG00000020844	SLTM	99	64.896	Ovis_aries
ENSLACG00000005234	SLTM	99	64.605	ENSPPAG00000029308	SLTM	99	65.156	Pan_paniscus
ENSLACG00000005234	SLTM	99	65.491	ENSPPRG00000012400	SLTM	99	65.849	Panthera_pardus
ENSLACG00000005234	SLTM	96	64.921	ENSPTIG00000021933	SLTM	95	65.453	Panthera_tigris_altaica
ENSLACG00000005234	SLTM	99	65.684	ENSPTRG00000007121	SLTM	99	66.226	Pan_troglodytes
ENSLACG00000005234	SLTM	99	64.103	ENSPANG00000017193	SLTM	99	64.656	Papio_anubis
ENSLACG00000005234	SLTM	87	74.000	ENSPKIG00000022760	sltm	100	74.000	Paramormyrops_kingsleyae
ENSLACG00000005234	SLTM	99	66.286	ENSPSIG00000005489	SLTM	60	64.229	Pelodiscus_sinensis
ENSLACG00000005234	SLTM	99	64.381	ENSPEMG00000013263	Sltm	99	64.131	Peromyscus_maniculatus_bairdii
ENSLACG00000005234	SLTM	99	66.952	ENSPCIG00000028356	SLTM	99	68.056	Phascolarctos_cinereus
ENSLACG00000005234	SLTM	99	44.011	ENSPFOG00000004372	sltm	99	45.209	Poecilia_formosa
ENSLACG00000005234	SLTM	83	46.596	ENSPLAG00000008000	sltm	99	45.209	Poecilia_latipinna
ENSLACG00000005234	SLTM	83	46.341	ENSPMEG00000006047	sltm	99	45.387	Poecilia_mexicana
ENSLACG00000005234	SLTM	83	45.387	ENSPREG00000023236	sltm	99	43.796	Poecilia_reticulata
ENSLACG00000005234	SLTM	99	64.544	ENSPPYG00000006515	SLTM	99	64.778	Pongo_abelii
ENSLACG00000005234	SLTM	100	57.895	ENSPCAG00000013482	SLTM	99	57.949	Procavia_capensis
ENSLACG00000005234	SLTM	99	65.494	ENSPCOG00000010624	SLTM	99	65.660	Propithecus_coquereli
ENSLACG00000005234	SLTM	99	62.822	ENSPVAG00000015056	SLTM	99	63.491	Pteropus_vampyrus
ENSLACG00000005234	SLTM	100	49.036	ENSPNYG00000013893	sltm	100	51.105	Pundamilia_nyererei
ENSLACG00000005234	SLTM	78	57.876	ENSPNAG00000020563	sltm	98	53.515	Pygocentrus_nattereri
ENSLACG00000005234	SLTM	96	65.020	ENSRBIG00000029226	SLTM	99	65.551	Rhinopithecus_bieti
ENSLACG00000005234	SLTM	99	65.494	ENSRROG00000045301	SLTM	99	66.038	Rhinopithecus_roxellana
ENSLACG00000005234	SLTM	99	65.396	ENSSBOG00000018883	SLTM	99	65.755	Saimiri_boliviensis_boliviensis
ENSLACG00000005234	SLTM	96	66.798	ENSSHAG00000015395	SLTM	99	66.634	Sarcophilus_harrisii
ENSLACG00000005234	SLTM	99	49.446	ENSSMAG00000000355	sltm	99	50.184	Scophthalmus_maximus
ENSLACG00000005234	SLTM	99	49.953	ENSSDUG00000018134	sltm	99	51.866	Seriola_dumerili
ENSLACG00000005234	SLTM	99	50.233	ENSSLDG00000013907	sltm	99	51.772	Seriola_lalandi_dorsalis
ENSLACG00000005234	SLTM	100	49.544	ENSSPAG00000008130	sltm	100	50.455	Stegastes_partitus
ENSLACG00000005234	SLTM	99	63.985	ENSSSCG00000004592	SLTM	99	68.941	Sus_scrofa
ENSLACG00000005234	SLTM	93	64.315	ENSTGUG00000006017	SLTM	57	60.436	Taeniopygia_guttata
ENSLACG00000005234	SLTM	55	56.055	ENSTBEG00000000945	SLTM	100	62.130	Tupaia_belangeri
ENSLACG00000005234	SLTM	99	65.246	ENSTTRG00000005246	SLTM	99	65.439	Tursiops_truncatus
ENSLACG00000005234	SLTM	79	69.341	ENSUAMG00000025901	SLTM	100	70.096	Ursus_americanus
ENSLACG00000005234	SLTM	97	63.743	ENSUMAG00000023678	SLTM	100	69.617	Ursus_maritimus
ENSLACG00000005234	SLTM	55	59.725	ENSVPAG00000008606	SLTM	100	64.631	Vicugna_pacos
ENSLACG00000005234	SLTM	99	64.734	ENSVVUG00000001450	SLTM	99	65.693	Vulpes_vulpes
ENSLACG00000005234	SLTM	100	59.646	ENSXETG00000010840	sltm	100	59.308	Xenopus_tropicalis
ENSLACG00000005234	SLTM	83	46.865	ENSXMAG00000014466	sltm	99	46.004	Xiphophorus_maculatus