EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000005246 (Gene tree)
Gene ID: -
Gene Symbol: TSN
Alias: BCLF-1|REHF-1|TRSLN
Full Name: translin
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 12971 bases
Position: chrJH127549.1:158835-171805
Accession: 12379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005911	Translin	PF01997.16	3.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005963	TSN-201	863	-	ENSLACP00000005911	228 (aa)	-	H3A8E0

Gene Model

Click here to download ENSLACG00000005246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005246	TSN	99	59.031	ENSG00000211460	TSN	98	59.031	Homo_sapiens
ENSLACG00000005246	TSN	99	62.609	ENSAPOG00000002063	tsn	100	62.609	Acanthochromis_polyacanthus
ENSLACG00000005246	TSN	99	59.471	ENSAMEG00000005055	TSN	98	59.471	Ailuropoda_melanoleuca
ENSLACG00000005246	TSN	100	63.043	ENSACIG00000021694	tsn	100	63.043	Amphilophus_citrinellus
ENSLACG00000005246	TSN	99	62.609	ENSAOCG00000015574	tsn	100	62.609	Amphiprion_ocellaris
ENSLACG00000005246	TSN	99	62.609	ENSAPEG00000001677	tsn	100	62.609	Amphiprion_percula
ENSLACG00000005246	TSN	100	62.174	ENSATEG00000004115	tsn	100	62.174	Anabas_testudineus
ENSLACG00000005246	TSN	94	61.261	ENSACAG00000004757	TSN	99	61.261	Anolis_carolinensis
ENSLACG00000005246	TSN	99	59.031	ENSANAG00000026842	TSN	98	59.031	Aotus_nancymaae
ENSLACG00000005246	TSN	100	63.043	ENSACLG00000020831	tsn	100	63.043	Astatotilapia_calliptera
ENSLACG00000005246	TSN	100	62.174	ENSAMXG00000035417	tsn	100	62.174	Astyanax_mexicanus
ENSLACG00000005246	TSN	99	59.471	ENSBTAG00000006059	TSN	98	59.471	Bos_taurus
ENSLACG00000005246	TSN	99	59.031	ENSCJAG00000047222	-	98	59.031	Callithrix_jacchus
ENSLACG00000005246	TSN	99	59.031	ENSCJAG00000044533	-	98	59.031	Callithrix_jacchus
ENSLACG00000005246	TSN	99	59.471	ENSCAFG00000004700	TSN	93	59.471	Canis_familiaris
ENSLACG00000005246	TSN	99	59.471	ENSCAFG00020011747	TSN	98	59.471	Canis_lupus_dingo
ENSLACG00000005246	TSN	99	59.471	ENSCHIG00000010715	TSN	98	59.471	Capra_hircus
ENSLACG00000005246	TSN	99	58.590	ENSTSYG00000004395	TSN	98	58.590	Carlito_syrichta
ENSLACG00000005246	TSN	89	56.158	ENSCAPG00000015595	TSN	79	56.158	Cavia_aperea
ENSLACG00000005246	TSN	99	59.031	ENSCPOG00000035645	TSN	98	59.031	Cavia_porcellus
ENSLACG00000005246	TSN	60	41.304	ENSCCAG00000034886	-	75	41.304	Cebus_capucinus
ENSLACG00000005246	TSN	99	59.471	ENSCCAG00000026371	TSN	98	59.471	Cebus_capucinus
ENSLACG00000005246	TSN	99	59.031	ENSCATG00000032155	TSN	98	59.031	Cercocebus_atys
ENSLACG00000005246	TSN	99	59.031	ENSCLAG00000006171	TSN	98	59.031	Chinchilla_lanigera
ENSLACG00000005246	TSN	99	59.031	ENSCSAG00000016712	TSN	98	59.031	Chlorocebus_sabaeus
ENSLACG00000005246	TSN	97	51.570	ENSCPBG00000018116	-	96	51.570	Chrysemys_picta_bellii
ENSLACG00000005246	TSN	61	54.348	ENSCPBG00000013741	-	71	54.348	Chrysemys_picta_bellii
ENSLACG00000005246	TSN	96	38.839	ENSCING00000012612	-	100	38.839	Ciona_intestinalis
ENSLACG00000005246	TSN	98	37.611	ENSCSAVG00000009485	-	99	37.611	Ciona_savignyi
ENSLACG00000005246	TSN	99	59.031	ENSCANG00000041881	TSN	98	59.031	Colobus_angolensis_palliatus
ENSLACG00000005246	TSN	99	59.031	ENSCGRG00001018233	Tsn	98	59.031	Cricetulus_griseus_chok1gshd
ENSLACG00000005246	TSN	99	59.031	ENSCGRG00000008331	Tsn	98	59.031	Cricetulus_griseus_crigri
ENSLACG00000005246	TSN	98	60.177	ENSCSEG00000005825	tsn	98	60.177	Cynoglossus_semilaevis
ENSLACG00000005246	TSN	99	54.783	ENSCVAG00000022024	tsn	99	54.783	Cyprinodon_variegatus
ENSLACG00000005246	TSN	100	63.043	ENSDARG00000041830	tsn	100	63.043	Danio_rerio
ENSLACG00000005246	TSN	99	59.471	ENSDNOG00000025740	TSN	98	59.471	Dasypus_novemcinctus
ENSLACG00000005246	TSN	99	59.031	ENSDORG00000026251	-	98	59.031	Dipodomys_ordii
ENSLACG00000005246	TSN	96	38.565	FBgn0033528	trsn	91	38.565	Drosophila_melanogaster
ENSLACG00000005246	TSN	99	59.471	ENSEASG00005004774	TSN	98	59.471	Equus_asinus_asinus
ENSLACG00000005246	TSN	99	59.471	ENSECAG00000015930	TSN	98	59.471	Equus_caballus
ENSLACG00000005246	TSN	75	55.491	ENSEEUG00000013935	TSN	98	55.491	Erinaceus_europaeus
ENSLACG00000005246	TSN	100	63.043	ENSELUG00000007669	tsn	100	63.043	Esox_lucius
ENSLACG00000005246	TSN	99	59.471	ENSFCAG00000027149	TSN	98	59.471	Felis_catus
ENSLACG00000005246	TSN	74	39.306	ENSFCAG00000022306	-	90	41.358	Felis_catus
ENSLACG00000005246	TSN	90	59.903	ENSFALG00000013247	TSN	95	58.371	Ficedula_albicollis
ENSLACG00000005246	TSN	99	59.031	ENSFDAG00000012302	TSN	98	59.031	Fukomys_damarensis
ENSLACG00000005246	TSN	100	61.739	ENSFHEG00000015531	tsn	100	61.739	Fundulus_heteroclitus
ENSLACG00000005246	TSN	99	61.135	ENSGMOG00000009247	tsn	100	61.135	Gadus_morhua
ENSLACG00000005246	TSN	99	61.233	ENSGALG00000011652	TSN	98	61.233	Gallus_gallus
ENSLACG00000005246	TSN	100	63.478	ENSGAFG00000003816	tsn	100	63.478	Gambusia_affinis
ENSLACG00000005246	TSN	99	63.319	ENSGACG00000000235	tsn	98	63.319	Gasterosteus_aculeatus
ENSLACG00000005246	TSN	99	59.031	ENSGGOG00000002216	TSN	98	59.031	Gorilla_gorilla
ENSLACG00000005246	TSN	99	63.478	ENSHBUG00000002340	tsn	85	63.478	Haplochromis_burtoni
ENSLACG00000005246	TSN	99	59.031	ENSHGLG00000007038	TSN	98	59.031	Heterocephalus_glaber_female
ENSLACG00000005246	TSN	99	59.031	ENSHGLG00100000069	TSN	98	59.031	Heterocephalus_glaber_male
ENSLACG00000005246	TSN	98	63.274	ENSHCOG00000001756	tsn	99	63.274	Hippocampus_comes
ENSLACG00000005246	TSN	100	62.609	ENSIPUG00000021370	tsn	100	62.609	Ictalurus_punctatus
ENSLACG00000005246	TSN	99	59.031	ENSSTOG00000000972	TSN	98	59.031	Ictidomys_tridecemlineatus
ENSLACG00000005246	TSN	97	59.641	ENSJJAG00000006730	Tsn	96	59.641	Jaculus_jaculus
ENSLACG00000005246	TSN	100	62.609	ENSKMAG00000004996	tsn	100	62.609	Kryptolebias_marmoratus
ENSLACG00000005246	TSN	100	62.174	ENSLBEG00000012620	tsn	100	62.174	Labrus_bergylta
ENSLACG00000005246	TSN	99	63.877	ENSLOCG00000002191	tsn	97	63.877	Lepisosteus_oculatus
ENSLACG00000005246	TSN	99	53.913	ENSLAFG00000032428	TSN	98	53.913	Loxodonta_africana
ENSLACG00000005246	TSN	99	59.031	ENSMFAG00000044217	TSN	98	59.031	Macaca_fascicularis
ENSLACG00000005246	TSN	99	59.031	ENSMMUG00000021119	TSN	98	59.031	Macaca_mulatta
ENSLACG00000005246	TSN	99	59.031	ENSMNEG00000040632	TSN	98	59.031	Macaca_nemestrina
ENSLACG00000005246	TSN	57	52.713	ENSMLEG00000038656	TSN	98	52.713	Mandrillus_leucophaeus
ENSLACG00000005246	TSN	100	63.043	ENSMAMG00000019536	tsn	100	63.043	Mastacembelus_armatus
ENSLACG00000005246	TSN	100	63.043	ENSMZEG00005018715	tsn	85	63.043	Maylandia_zebra
ENSLACG00000005246	TSN	75	56.000	ENSMGAG00000011956	TSN	88	56.000	Meleagris_gallopavo
ENSLACG00000005246	TSN	91	57.895	ENSMAUG00000018800	Tsn	98	58.537	Mesocricetus_auratus
ENSLACG00000005246	TSN	99	59.031	ENSMICG00000015793	TSN	98	59.031	Microcebus_murinus
ENSLACG00000005246	TSN	99	59.031	ENSMOCG00000013248	Tsn	98	59.031	Microtus_ochrogaster
ENSLACG00000005246	TSN	90	62.019	ENSMMOG00000019661	tsn	100	62.019	Mola_mola
ENSLACG00000005246	TSN	97	57.143	ENSMODG00000000147	TSN	98	56.579	Monodelphis_domestica
ENSLACG00000005246	TSN	100	62.174	ENSMALG00000001827	tsn	100	62.174	Monopterus_albus
ENSLACG00000005246	TSN	99	59.471	ENSMUSG00000026374	Tsn	98	59.471	Mus_musculus
ENSLACG00000005246	TSN	99	59.471	MGP_PahariEiJ_G0027742	Tsn	98	59.471	Mus_pahari
ENSLACG00000005246	TSN	99	59.471	MGP_SPRETEiJ_G0015313	Tsn	98	59.471	Mus_spretus
ENSLACG00000005246	TSN	99	59.471	ENSMPUG00000001056	TSN	98	59.471	Mustela_putorius_furo
ENSLACG00000005246	TSN	89	59.512	ENSMLUG00000012656	TSN	98	59.512	Myotis_lucifugus
ENSLACG00000005246	TSN	99	59.031	ENSNGAG00000010353	Tsn	98	59.031	Nannospalax_galili
ENSLACG00000005246	TSN	100	63.043	ENSNBRG00000001193	tsn	100	63.043	Neolamprologus_brichardi
ENSLACG00000005246	TSN	99	59.031	ENSNLEG00000032773	TSN	98	59.031	Nomascus_leucogenys
ENSLACG00000005246	TSN	61	50.725	ENSMEUG00000006228	TSN	59	50.725	Notamacropus_eugenii
ENSLACG00000005246	TSN	99	59.031	ENSODEG00000008386	-	98	59.031	Octodon_degus
ENSLACG00000005246	TSN	99	52.863	ENSODEG00000005998	-	98	52.863	Octodon_degus
ENSLACG00000005246	TSN	99	63.913	ENSONIG00000017060	tsn	100	63.913	Oreochromis_niloticus
ENSLACG00000005246	TSN	87	60.697	ENSOANG00000003457	TSN	98	60.000	Ornithorhynchus_anatinus
ENSLACG00000005246	TSN	99	59.031	ENSOCUG00000023529	TSN	98	59.031	Oryctolagus_cuniculus
ENSLACG00000005246	TSN	99	62.174	ENSORLG00000010049	tsn	100	62.174	Oryzias_latipes
ENSLACG00000005246	TSN	100	61.739	ENSORLG00020016476	tsn	100	61.739	Oryzias_latipes_hni
ENSLACG00000005246	TSN	60	52.555	ENSORLG00020017000	-	78	52.555	Oryzias_latipes_hni
ENSLACG00000005246	TSN	99	62.609	ENSORLG00015019192	tsn	100	62.609	Oryzias_latipes_hsok
ENSLACG00000005246	TSN	99	62.174	ENSOMEG00000016335	tsn	100	62.174	Oryzias_melastigma
ENSLACG00000005246	TSN	99	59.031	ENSOGAG00000030436	TSN	98	59.031	Otolemur_garnettii
ENSLACG00000005246	TSN	99	59.471	ENSOARG00000013339	TSN	98	59.471	Ovis_aries
ENSLACG00000005246	TSN	99	59.031	ENSPPAG00000032878	TSN	98	59.031	Pan_paniscus
ENSLACG00000005246	TSN	81	41.176	ENSPPRG00000004174	-	78	41.176	Panthera_pardus
ENSLACG00000005246	TSN	99	59.471	ENSPPRG00000006531	TSN	98	59.471	Panthera_pardus
ENSLACG00000005246	TSN	52	54.237	ENSPTIG00000012953	TSN	79	54.237	Panthera_tigris_altaica
ENSLACG00000005246	TSN	99	59.031	ENSPTRG00000012420	TSN	98	59.031	Pan_troglodytes
ENSLACG00000005246	TSN	99	59.031	ENSPANG00000000733	TSN	98	59.031	Papio_anubis
ENSLACG00000005246	TSN	98	62.832	ENSPKIG00000002005	tsn	98	62.832	Paramormyrops_kingsleyae
ENSLACG00000005246	TSN	74	58.824	ENSPSIG00000006064	TSN	91	58.824	Pelodiscus_sinensis
ENSLACG00000005246	TSN	100	63.043	ENSPMGG00000015287	tsn	100	63.043	Periophthalmus_magnuspinnatus
ENSLACG00000005246	TSN	98	51.111	ENSPMAG00000009161	tsn	96	51.111	Petromyzon_marinus
ENSLACG00000005246	TSN	89	58.537	ENSPCIG00000023491	TSN	98	58.537	Phascolarctos_cinereus
ENSLACG00000005246	TSN	100	63.043	ENSPFOG00000016063	tsn	100	63.043	Poecilia_formosa
ENSLACG00000005246	TSN	100	63.043	ENSPLAG00000010654	tsn	100	63.043	Poecilia_latipinna
ENSLACG00000005246	TSN	100	62.609	ENSPMEG00000023570	tsn	100	62.609	Poecilia_mexicana
ENSLACG00000005246	TSN	100	62.609	ENSPREG00000003481	tsn	100	62.609	Poecilia_reticulata
ENSLACG00000005246	TSN	99	59.031	ENSPPYG00000012774	TSN	98	59.031	Pongo_abelii
ENSLACG00000005246	TSN	75	56.069	ENSPCAG00000003549	TSN	98	56.069	Procavia_capensis
ENSLACG00000005246	TSN	99	59.031	ENSPCOG00000011045	TSN	98	59.031	Propithecus_coquereli
ENSLACG00000005246	TSN	99	59.471	ENSPVAG00000016702	TSN	98	59.471	Pteropus_vampyrus
ENSLACG00000005246	TSN	100	63.043	ENSPNYG00000012396	tsn	85	63.043	Pundamilia_nyererei
ENSLACG00000005246	TSN	100	63.043	ENSPNAG00000018140	tsn	100	63.043	Pygocentrus_nattereri
ENSLACG00000005246	TSN	99	59.031	ENSRNOG00000002319	Tsn	98	59.031	Rattus_norvegicus
ENSLACG00000005246	TSN	99	59.031	ENSRBIG00000041316	TSN	98	59.031	Rhinopithecus_bieti
ENSLACG00000005246	TSN	99	59.031	ENSRROG00000029954	TSN	98	59.031	Rhinopithecus_roxellana
ENSLACG00000005246	TSN	61	46.377	ENSSBOG00000015719	-	74	46.377	Saimiri_boliviensis_boliviensis
ENSLACG00000005246	TSN	99	59.031	ENSSBOG00000028579	TSN	98	59.031	Saimiri_boliviensis_boliviensis
ENSLACG00000005246	TSN	99	58.590	ENSSHAG00000011707	TSN	98	58.590	Sarcophilus_harrisii
ENSLACG00000005246	TSN	100	61.304	ENSSFOG00015020668	tsn	100	61.304	Scleropages_formosus
ENSLACG00000005246	TSN	99	63.043	ENSSMAG00000005822	tsn	100	63.043	Scophthalmus_maximus
ENSLACG00000005246	TSN	100	62.174	ENSSDUG00000011388	tsn	100	62.174	Seriola_dumerili
ENSLACG00000005246	TSN	100	62.174	ENSSLDG00000008206	tsn	100	62.174	Seriola_lalandi_dorsalis
ENSLACG00000005246	TSN	99	43.612	ENSSARG00000007193	-	98	43.612	Sorex_araneus
ENSLACG00000005246	TSN	99	64.069	ENSSPUG00000017518	TSN	100	64.069	Sphenodon_punctatus
ENSLACG00000005246	TSN	99	62.609	ENSSPAG00000009283	tsn	100	62.609	Stegastes_partitus
ENSLACG00000005246	TSN	99	59.031	ENSSSCG00000015729	TSN	98	59.031	Sus_scrofa
ENSLACG00000005246	TSN	99	60.793	ENSTGUG00000004445	TSN	98	60.793	Taeniopygia_guttata
ENSLACG00000005246	TSN	98	61.674	ENSTRUG00000013691	tsn	99	61.674	Takifugu_rubripes
ENSLACG00000005246	TSN	98	62.555	ENSTNIG00000015707	tsn	98	62.555	Tetraodon_nigroviridis
ENSLACG00000005246	TSN	99	58.590	ENSTBEG00000015319	TSN	98	58.590	Tupaia_belangeri
ENSLACG00000005246	TSN	99	59.471	ENSTTRG00000005854	TSN	98	59.471	Tursiops_truncatus
ENSLACG00000005246	TSN	99	59.471	ENSUAMG00000021618	TSN	98	59.471	Ursus_americanus
ENSLACG00000005246	TSN	99	58.150	ENSUMAG00000008516	TSN	98	58.150	Ursus_maritimus
ENSLACG00000005246	TSN	89	59.804	ENSVVUG00000027555	TSN	97	59.512	Vulpes_vulpes
ENSLACG00000005246	TSN	98	59.735	ENSXETG00000000838	tsn	98	59.735	Xenopus_tropicalis
ENSLACG00000005246	TSN	54	59.836	ENSXCOG00000018514	tsn	92	59.836	Xiphophorus_couchianus
ENSLACG00000005246	TSN	100	63.913	ENSXMAG00000022538	tsn	100	63.913	Xiphophorus_maculatus