EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005264 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 271-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1986 bases
Position: chrJH127700.1:159580-161565
Accession: 102357282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005930	zf-C2H2	PF00096.26	5.7e-49	1	8
ENSLACP00000005930	zf-C2H2	PF00096.26	5.7e-49	2	8
ENSLACP00000005930	zf-C2H2	PF00096.26	5.7e-49	3	8
ENSLACP00000005930	zf-C2H2	PF00096.26	5.7e-49	4	8
ENSLACP00000005930	zf-C2H2	PF00096.26	5.7e-49	5	8
ENSLACP00000005930	zf-C2H2	PF00096.26	5.7e-49	6	8
ENSLACP00000005930	zf-C2H2	PF00096.26	5.7e-49	7	8
ENSLACP00000005930	zf-C2H2	PF00096.26	5.7e-49	8	8
ENSLACP00000005930	zf-met	PF12874.7	1.7e-20	1	4
ENSLACP00000005930	zf-met	PF12874.7	1.7e-20	2	4
ENSLACP00000005930	zf-met	PF12874.7	1.7e-20	3	4
ENSLACP00000005930	zf-met	PF12874.7	1.7e-20	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005982	-	1038	XM_006005084	ENSLACP00000005930	346 (aa)	XP_006005146	H3A8F9

Gene Model

Click here to download ENSLACG00000005264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005264's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005264	-	97	44.554	ENSLACG00000010025	ZNF581	81	44.554
ENSLACG00000005264	-	99	39.803	ENSLACG00000022211	-	77	39.803
ENSLACG00000005264	-	97	38.235	ENSLACG00000017590	-	69	38.235
ENSLACG00000005264	-	97	34.505	ENSLACG00000009005	-	100	34.505
ENSLACG00000005264	-	97	37.615	ENSLACG00000010627	ZNF236	63	35.714
ENSLACG00000005264	-	99	30.065	ENSLACG00000007021	ZNF521	96	30.065
ENSLACG00000005264	-	97	39.806	ENSLACG00000012207	GFI1B	52	39.806
ENSLACG00000005264	-	96	41.739	ENSLACG00000004191	-	76	41.739
ENSLACG00000005264	-	99	34.218	ENSLACG00000000891	ZNF319	98	37.255
ENSLACG00000005264	-	97	37.879	ENSLACG00000003588	SCRT1	57	37.879
ENSLACG00000005264	-	97	35.135	ENSLACG00000005413	snai2	56	35.135
ENSLACG00000005264	-	99	35.154	ENSLACG00000017381	-	99	33.227
ENSLACG00000005264	-	97	35.593	ENSLACG00000017707	SNAI1	72	35.593
ENSLACG00000005264	-	98	40.171	ENSLACG00000007310	-	100	40.171
ENSLACG00000005264	-	98	30.814	ENSLACG00000009187	PRDM5	80	37.037
ENSLACG00000005264	-	97	30.000	ENSLACG00000010161	MAZ	77	30.488
ENSLACG00000005264	-	97	32.500	ENSLACG00000010551	ZFAT	50	31.707
ENSLACG00000005264	-	81	60.870	ENSLACG00000011466	ZBTB24	81	46.512
ENSLACG00000005264	-	99	36.296	ENSLACG00000009642	-	100	36.296
ENSLACG00000005264	-	99	39.628	ENSLACG00000014708	-	60	39.628

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005264	-	97	41.566	ENSACAG00000008664	-	70	41.916	Anolis_carolinensis
ENSLACG00000005264	-	95	38.462	ENSACAG00000024898	-	98	38.462	Anolis_carolinensis
ENSLACG00000005264	-	97	40.199	ENSACAG00000024956	-	77	40.199	Anolis_carolinensis
ENSLACG00000005264	-	97	38.764	ENSAMXG00000035246	-	71	38.764	Astyanax_mexicanus
ENSLACG00000005264	-	97	39.672	ENSAMXG00000042746	-	87	39.672	Astyanax_mexicanus
ENSLACG00000005264	-	96	44.144	ENSAMXG00000032841	-	76	44.144	Astyanax_mexicanus
ENSLACG00000005264	-	97	39.672	ENSAMXG00000038536	-	87	39.672	Astyanax_mexicanus
ENSLACG00000005264	-	96	40.940	ENSAMXG00000038636	-	93	40.940	Astyanax_mexicanus
ENSLACG00000005264	-	96	39.103	ENSAMXG00000036233	-	78	39.103	Astyanax_mexicanus
ENSLACG00000005264	-	98	38.430	ENSAMXG00000034344	-	77	37.445	Astyanax_mexicanus
ENSLACG00000005264	-	96	37.624	ENSAMXG00000034847	-	85	37.624	Astyanax_mexicanus
ENSLACG00000005264	-	99	43.478	ENSAMXG00000042784	-	96	42.982	Astyanax_mexicanus
ENSLACG00000005264	-	97	38.298	ENSAMXG00000025452	-	95	38.298	Astyanax_mexicanus
ENSLACG00000005264	-	96	38.333	ENSAMXG00000038325	-	92	38.333	Astyanax_mexicanus
ENSLACG00000005264	-	97	39.373	ENSAMXG00000010805	-	97	39.373	Astyanax_mexicanus
ENSLACG00000005264	-	95	42.424	ENSBTAG00000038322	-	76	42.424	Bos_taurus
ENSLACG00000005264	-	97	33.681	ENSCPBG00000008580	-	76	33.681	Chrysemys_picta_bellii
ENSLACG00000005264	-	96	39.057	ENSCPBG00000013652	-	76	36.202	Chrysemys_picta_bellii
ENSLACG00000005264	-	98	40.316	ENSCPBG00000001526	-	87	39.310	Chrysemys_picta_bellii
ENSLACG00000005264	-	97	36.795	ENSCSAVG00000010960	-	99	36.795	Ciona_savignyi
ENSLACG00000005264	-	98	38.342	ENSDNOG00000047495	-	77	39.033	Dasypus_novemcinctus
ENSLACG00000005264	-	96	37.952	ENSEBUG00000002075	-	78	37.952	Eptatretus_burgeri
ENSLACG00000005264	-	97	37.037	ENSEBUG00000014717	-	74	37.037	Eptatretus_burgeri
ENSLACG00000005264	-	97	33.993	ENSEBUG00000013875	-	82	33.993	Eptatretus_burgeri
ENSLACG00000005264	-	96	37.237	ENSEBUG00000005264	-	75	37.237	Eptatretus_burgeri
ENSLACG00000005264	-	96	41.118	ENSEBUG00000012919	-	74	41.118	Eptatretus_burgeri
ENSLACG00000005264	-	97	38.261	ENSEBUG00000011694	-	95	39.227	Eptatretus_burgeri
ENSLACG00000005264	-	97	35.354	ENSEBUG00000015837	-	79	35.380	Eptatretus_burgeri
ENSLACG00000005264	-	97	39.640	ENSEBUG00000011435	-	86	39.640	Eptatretus_burgeri
ENSLACG00000005264	-	96	39.427	ENSEBUG00000008306	-	79	39.427	Eptatretus_burgeri
ENSLACG00000005264	-	95	40.909	ENSEASG00005004469	-	70	40.909	Equus_asinus_asinus
ENSLACG00000005264	-	96	32.537	ENSGMOG00000018506	-	100	32.537	Gadus_morhua
ENSLACG00000005264	-	97	41.697	ENSGALG00000049609	-	55	41.544	Gallus_gallus
ENSLACG00000005264	-	98	40.823	ENSGALG00000054325	-	98	40.823	Gallus_gallus
ENSLACG00000005264	-	97	43.046	ENSGALG00000044069	-	60	43.030	Gallus_gallus
ENSLACG00000005264	-	98	39.073	ENSGALG00000053507	-	79	39.073	Gallus_gallus
ENSLACG00000005264	-	97	39.731	ENSGALG00000055127	-	75	38.111	Gallus_gallus
ENSLACG00000005264	-	98	43.902	ENSGALG00000046336	-	99	43.902	Gallus_gallus
ENSLACG00000005264	-	97	40.769	ENSGACG00000006283	-	74	40.769	Gasterosteus_aculeatus
ENSLACG00000005264	-	98	45.122	ENSGAGG00000011399	-	93	43.363	Gopherus_agassizii
ENSLACG00000005264	-	99	39.296	ENSGAGG00000011366	-	99	38.438	Gopherus_agassizii
ENSLACG00000005264	-	97	38.305	ENSGAGG00000018885	-	65	38.305	Gopherus_agassizii
ENSLACG00000005264	-	99	35.370	ENSHCOG00000018201	-	87	35.370	Hippocampus_comes
ENSLACG00000005264	-	98	36.607	ENSIPUG00000012109	ZN12	52	36.607	Ictalurus_punctatus
ENSLACG00000005264	-	97	40.066	ENSIPUG00000015468	-	92	38.650	Ictalurus_punctatus
ENSLACG00000005264	-	96	39.145	ENSIPUG00000021515	-	86	39.145	Ictalurus_punctatus
ENSLACG00000005264	-	99	36.444	ENSJJAG00000023633	Zfp672	90	36.444	Jaculus_jaculus
ENSLACG00000005264	-	97	39.098	ENSLOCG00000017864	-	99	39.098	Lepisosteus_oculatus
ENSLACG00000005264	-	98	41.722	ENSMGAG00000013362	-	100	39.716	Meleagris_gallopavo
ENSLACG00000005264	-	96	36.000	ENSMAUG00000009945	Zfp672	88	36.000	Mesocricetus_auratus
ENSLACG00000005264	-	97	41.538	ENSMMOG00000003923	-	85	41.538	Mola_mola
ENSLACG00000005264	-	98	36.071	ENSMODG00000001880	-	79	36.071	Monodelphis_domestica
ENSLACG00000005264	-	97	37.538	ENSMODG00000010532	-	85	37.538	Monodelphis_domestica
ENSLACG00000005264	-	98	36.752	ENSMODG00000014052	-	100	36.752	Monodelphis_domestica
ENSLACG00000005264	-	100	37.906	MGP_CAROLIEiJ_G0030502	-	69	37.906	Mus_caroli
ENSLACG00000005264	-	97	36.090	MGP_CAROLIEiJ_G0016391	Zfp672	99	40.845	Mus_caroli
ENSLACG00000005264	-	97	39.542	ENSMUSG00000030823	9130019O22Rik	66	39.542	Mus_musculus
ENSLACG00000005264	-	97	36.090	MGP_SPRETEiJ_G0017233	Zfp672	99	39.437	Mus_spretus
ENSLACG00000005264	-	97	38.057	MGP_SPRETEiJ_G0031613	-	79	38.057	Mus_spretus
ENSLACG00000005264	-	97	39.007	ENSNGAG00000015777	Zim1	65	39.007	Nannospalax_galili
ENSLACG00000005264	-	98	37.615	ENSNBRG00000000708	-	90	37.615	Neolamprologus_brichardi
ENSLACG00000005264	-	95	41.026	ENSNBRG00000007276	-	67	41.026	Neolamprologus_brichardi
ENSLACG00000005264	-	88	44.538	ENSORLG00020001922	-	89	41.333	Oryzias_latipes_hni
ENSLACG00000005264	-	97	43.697	ENSOMEG00000001598	-	68	43.697	Oryzias_melastigma
ENSLACG00000005264	-	97	38.870	ENSPSIG00000015459	-	73	38.870	Pelodiscus_sinensis
ENSLACG00000005264	-	98	38.720	ENSPSIG00000006586	-	99	41.509	Pelodiscus_sinensis
ENSLACG00000005264	-	97	39.506	ENSPSIG00000000672	-	86	39.506	Pelodiscus_sinensis
ENSLACG00000005264	-	96	37.743	ENSPSIG00000010328	-	66	37.153	Pelodiscus_sinensis
ENSLACG00000005264	-	96	40.924	ENSPSIG00000013021	-	73	40.924	Pelodiscus_sinensis
ENSLACG00000005264	-	99	41.860	ENSPSIG00000003152	-	81	43.119	Pelodiscus_sinensis
ENSLACG00000005264	-	99	41.667	ENSPSIG00000016380	-	69	41.304	Pelodiscus_sinensis
ENSLACG00000005264	-	97	40.541	ENSPSIG00000012650	-	78	40.541	Pelodiscus_sinensis
ENSLACG00000005264	-	96	41.667	ENSPSIG00000004502	-	57	41.667	Pelodiscus_sinensis
ENSLACG00000005264	-	99	38.344	ENSPSIG00000005603	-	73	39.175	Pelodiscus_sinensis
ENSLACG00000005264	-	97	42.857	ENSPSIG00000010248	-	65	42.857	Pelodiscus_sinensis
ENSLACG00000005264	-	97	39.928	ENSPSIG00000005672	-	71	39.928	Pelodiscus_sinensis
ENSLACG00000005264	-	97	44.565	ENSPSIG00000006790	-	91	44.565	Pelodiscus_sinensis
ENSLACG00000005264	-	97	35.625	ENSPREG00000002642	-	92	35.625	Poecilia_reticulata
ENSLACG00000005264	-	97	46.032	ENSPNYG00000015486	-	63	46.032	Pundamilia_nyererei
ENSLACG00000005264	-	96	45.038	ENSPNAG00000018395	-	65	45.038	Pygocentrus_nattereri
ENSLACG00000005264	-	98	41.892	ENSPNAG00000000088	-	88	41.892	Pygocentrus_nattereri
ENSLACG00000005264	-	98	35.511	ENSRNOG00000002713	Zfp672	87	35.511	Rattus_norvegicus
ENSLACG00000005264	-	98	36.000	ENSSHAG00000018106	-	77	36.000	Sarcophilus_harrisii
ENSLACG00000005264	-	99	38.290	ENSSFOG00015019818	-	75	36.170	Scleropages_formosus
ENSLACG00000005264	-	97	38.129	ENSSMAG00000004252	-	86	38.129	Scophthalmus_maximus
ENSLACG00000005264	-	98	40.417	ENSSPUG00000004366	-	58	40.417	Sphenodon_punctatus
ENSLACG00000005264	-	98	39.940	ENSSPUG00000010016	-	94	41.613	Sphenodon_punctatus
ENSLACG00000005264	-	97	45.794	ENSSPAG00000021653	-	92	45.794	Stegastes_partitus
ENSLACG00000005264	-	96	49.533	ENSTGUG00000018351	-	99	49.533	Taeniopygia_guttata
ENSLACG00000005264	-	97	42.308	ENSTGUG00000015210	-	99	42.308	Taeniopygia_guttata
ENSLACG00000005264	-	99	42.188	ENSTRUG00000022066	-	90	42.188	Takifugu_rubripes
ENSLACG00000005264	-	98	47.164	ENSXETG00000031192	-	100	48.060	Xenopus_tropicalis
ENSLACG00000005264	-	96	42.169	ENSXCOG00000006553	-	86	42.169	Xiphophorus_couchianus
ENSLACG00000005264	-	96	35.565	ENSXMAG00000026680	-	90	35.565	Xiphophorus_maculatus