EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLACG00000005291 (Gene tree)
Gene ID
102352965
Gene Symbol
-
Alias
-
Full Name
PAT1 homolog 2
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Plus strand
Length
25134 bases
Position
chrJH127661.1:160678-185811
Accession
102352965
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000005961PAT1PF09770.92.2e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000006013-2277XM_006004808ENSLACP00000005961758 (aa)-H3A8J0
Gene Model
Click here to download ENSLACG00000005291's gene model file
Pathways
Pathway IDPathway NameSource
lcm03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005291's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000005291-6044.561ENSG00000229474PATL29947.200Homo_sapiens
ENSLACG00000005291-9730.498ENSG00000166889PATL19830.816Homo_sapiens
ENSLACG00000005291-8577.778ENSAPOG00000022988patl29841.835Acanthochromis_polyacanthus
ENSLACG00000005291-5336.275ENSAPOG00000021290patl15436.790Acanthochromis_polyacanthus
ENSLACG00000005291-6044.444ENSAMEG00000014997PATL28443.697Ailuropoda_melanoleuca
ENSLACG00000005291-9830.622ENSAMEG00000014215PATL19930.602Ailuropoda_melanoleuca
ENSLACG00000005291-9742.169ENSAOCG00000023738patl29142.608Amphiprion_ocellaris
ENSLACG00000005291-5235.980ENSAOCG00000021993patl15136.790Amphiprion_ocellaris
ENSLACG00000005291-6965.714ENSAPEG00000011299patl29450.000Amphiprion_percula
ENSLACG00000005291-7752.283ENSATEG00000019567patl28952.055Anabas_testudineus
ENSLACG00000005291-8348.666ENSAPLG00000003980PATL29949.294Anas_platyrhynchos
ENSLACG00000005291-9831.351ENSACAG00000006607PATL19831.351Anolis_carolinensis
ENSLACG00000005291-9730.620ENSANAG00000023078PATL19830.816Aotus_nancymaae
ENSLACG00000005291-6243.232ENSANAG00000022701PATL28443.522Aotus_nancymaae
ENSLACG00000005291-9741.255ENSAMXG00000020293patl29441.232Astyanax_mexicanus
ENSLACG00000005291-5338.015ENSAMXG00000010731patl15338.049Astyanax_mexicanus
ENSLACG00000005291-9830.130ENSBTAG00000005913PATL19830.545Bos_taurus
ENSLACG00000005291-9730.498ENSCJAG00000016192PATL19830.572Callithrix_jacchus
ENSLACG00000005291-6242.886ENSCJAG00000002379PATL28443.381Callithrix_jacchus
ENSLACG00000005291-6044.864ENSCAFG00000013629PATL28144.654Canis_familiaris
ENSLACG00000005291-9730.834ENSCAFG00000007581PATL19830.657Canis_familiaris
ENSLACG00000005291-6044.864ENSCAFG00020022169PATL28144.444Canis_lupus_dingo
ENSLACG00000005291-9731.030ENSCAFG00020001648PATL19930.657Canis_lupus_dingo
ENSLACG00000005291-6143.763ENSCHIG00000026665PATL28343.129Capra_hircus
ENSLACG00000005291-9730.788ENSTSYG00000012748PATL19431.493Carlito_syrichta
ENSLACG00000005291-6045.494ENSTSYG00000032456PATL28145.494Carlito_syrichta
ENSLACG00000005291-7236.534ENSCPOG00000006827PATL19830.559Cavia_porcellus
ENSLACG00000005291-5343.488ENSCPOG00000002922PATL28841.379Cavia_porcellus
ENSLACG00000005291-6044.280ENSCCAG00000025261PATL28243.949Cebus_capucinus
ENSLACG00000005291-9730.255ENSCCAG00000023759PATL19830.451Cebus_capucinus
ENSLACG00000005291-6044.561ENSCATG00000034794PATL29947.200Cercocebus_atys
ENSLACG00000005291-9730.377ENSCATG00000009629PATL19830.572Cercocebus_atys
ENSLACG00000005291-5644.318ENSCLAG00000014407PATL28942.094Chinchilla_lanigera
ENSLACG00000005291-6044.561ENSCSAG00000009601PATL28144.444Chlorocebus_sabaeus
ENSLACG00000005291-6235.409ENSCSAG00000006095PATL19731.601Chlorocebus_sabaeus
ENSLACG00000005291-5337.002ENSCHOG00000001611PATL16637.204Choloepus_hoffmanni
ENSLACG00000005291-7453.578ENSCPBG00000006150PATL28252.531Chrysemys_picta_bellii
ENSLACG00000005291-6044.748ENSCANG00000013856PATL28144.632Colobus_angolensis_palliatus
ENSLACG00000005291-5743.304ENSCGRG00001010801Patl28244.394Cricetulus_griseus_chok1gshd
ENSLACG00000005291-9730.797ENSCGRG00001024927Patl19831.303Cricetulus_griseus_chok1gshd
ENSLACG00000005291-5743.304ENSCGRG00000013007Patl28244.394Cricetulus_griseus_crigri
ENSLACG00000005291-9730.797ENSCGRG00000000461Patl19831.303Cricetulus_griseus_crigri
ENSLACG00000005291-5338.443ENSCSEG00000008261patl17632.317Cynoglossus_semilaevis
ENSLACG00000005291-8243.968ENSCSEG00000009438patl28443.740Cynoglossus_semilaevis
ENSLACG00000005291-5743.880ENSCVAG00000016203patl26543.880Cyprinodon_variegatus
ENSLACG00000005291-7334.110ENSDARG00000017423patl19930.961Danio_rerio
ENSLACG00000005291-8584.375ENSDARG00000089567patl29442.204Danio_rerio
ENSLACG00000005291-6435.227ENSDNOG00000038865PATL19435.048Dasypus_novemcinctus
ENSLACG00000005291-6243.838ENSDNOG00000036837PATL28044.578Dasypus_novemcinctus
ENSLACG00000005291-5543.913ENSDORG00000026649Patl28444.989Dipodomys_ordii
ENSLACG00000005291-9730.914ENSEASG00005007963PATL19831.619Equus_asinus_asinus
ENSLACG00000005291-6042.038ENSEASG00005017984PATL28041.387Equus_asinus_asinus
ENSLACG00000005291-9730.461ENSECAG00000011411PATL19830.779Equus_caballus
ENSLACG00000005291-6044.374ENSECAG00000013462PATL28043.487Equus_caballus
ENSLACG00000005291-9742.318ENSELUG00000023244patl29542.665Esox_lucius
ENSLACG00000005291-5336.855ENSELUG00000024249patl15137.101Esox_lucius
ENSLACG00000005291-6043.856ENSFCAG00000027170PATL28243.552Felis_catus
ENSLACG00000005291-6036.200ENSFCAG00000015573PATL19830.694Felis_catus
ENSLACG00000005291-9830.981ENSFALG00000012150PATL19931.100Ficedula_albicollis
ENSLACG00000005291-9642.819ENSFALG00000009768PATL29944.205Ficedula_albicollis
ENSLACG00000005291-5841.720ENSFDAG00000012242PATL28940.890Fukomys_damarensis
ENSLACG00000005291-5847.738ENSGMOG00000005666patl210047.738Gadus_morhua
ENSLACG00000005291-9731.630ENSGALG00000042641PATL19931.509Gallus_gallus
ENSLACG00000005291-9351.440ENSGALG00000002167PATL29943.705Gallus_gallus
ENSLACG00000005291-9941.130ENSGAFG00000019344patl29641.634Gambusia_affinis
ENSLACG00000005291-5236.881ENSGACG00000016448patl15936.000Gasterosteus_aculeatus
ENSLACG00000005291-9731.219ENSGAGG00000004461PATL19831.454Gopherus_agassizii
ENSLACG00000005291-6044.561ENSGGOG00000025923PATL28144.444Gorilla_gorilla
ENSLACG00000005291-9730.617ENSGGOG00000004335PATL19931.064Gorilla_gorilla
ENSLACG00000005291-6548.096ENSHBUG00000005929patl27347.705Haplochromis_burtoni
ENSLACG00000005291-9730.340ENSHGLG00000018173PATL19831.227Heterocephalus_glaber_female
ENSLACG00000005291-5343.499ENSHGLG00000017415-7943.365Heterocephalus_glaber_female
ENSLACG00000005291-9730.097ENSHGLG00100003453PATL19830.984Heterocephalus_glaber_male
ENSLACG00000005291-5343.224ENSHGLG00100008419-7943.326Heterocephalus_glaber_male
ENSLACG00000005291-5336.740ENSHCOG00000001898patl17531.442Hippocampus_comes
ENSLACG00000005291-9739.474ENSHCOG00000016754patl29539.869Hippocampus_comes
ENSLACG00000005291-9741.520ENSIPUG00000020692patl29440.515Ictalurus_punctatus
ENSLACG00000005291-9730.535ENSSTOG00000013764PATL19830.769Ictidomys_tridecemlineatus
ENSLACG00000005291-6043.573ENSSTOG00000033848PATL28042.918Ictidomys_tridecemlineatus
ENSLACG00000005291-9641.578ENSKMAG00000021275patl29342.570Kryptolebias_marmoratus
ENSLACG00000005291-8144.480ENSLBEG00000022344patl29541.578Labrus_bergylta
ENSLACG00000005291-5643.636ENSLAFG00000031124PATL28043.400Loxodonta_africana
ENSLACG00000005291-6044.676ENSMFAG00000003565PATL28144.561Macaca_fascicularis
ENSLACG00000005291-9730.377ENSMFAG00000040851PATL19830.572Macaca_fascicularis
ENSLACG00000005291-9730.377ENSMMUG00000017287PATL19830.572Macaca_mulatta
ENSLACG00000005291-6044.351ENSMNEG00000034510PATL28144.235Macaca_nemestrina
ENSLACG00000005291-9730.377ENSMNEG00000038692PATL19830.572Macaca_nemestrina
ENSLACG00000005291-6044.351ENSMLEG00000042248PATL28144.444Mandrillus_leucophaeus
ENSLACG00000005291-9730.377ENSMLEG00000030044PATL19830.572Mandrillus_leucophaeus
ENSLACG00000005291-8140.872ENSMAMG00000013327patl29738.503Mastacembelus_armatus
ENSLACG00000005291-5336.700ENSMAMG00000003950patl15237.346Mastacembelus_armatus
ENSLACG00000005291-8249.683ENSMGAG00000001309PATL29850.239Meleagris_gallopavo
ENSLACG00000005291-8930.263ENSMGAG00000003406PATL19730.911Meleagris_gallopavo
ENSLACG00000005291-5645.023ENSMAUG00000001008Patl28044.898Mesocricetus_auratus
ENSLACG00000005291-7930.352ENSMICG00000004172PATL19631.176Microcebus_murinus
ENSLACG00000005291-5246.569ENSMOCG00000015367Patl27346.324Microtus_ochrogaster
ENSLACG00000005291-9730.918ENSMOCG00000010087Patl19831.425Microtus_ochrogaster
ENSLACG00000005291-5236.453ENSMMOG00000013711patl15635.961Mola_mola
ENSLACG00000005291-5844.570ENSMMOG00000001299patl26544.118Mola_mola
ENSLACG00000005291-6143.326ENSMODG00000017690PATL28142.710Monodelphis_domestica
ENSLACG00000005291-9830.751ENSMODG00000020201PATL19830.620Monodelphis_domestica
ENSLACG00000005291-9740.323ENSMALG00000008131patl29040.323Monopterus_albus
ENSLACG00000005291-6141.152MGP_CAROLIEiJ_G0024205Patl28640.365Mus_caroli
ENSLACG00000005291-9730.292MGP_CAROLIEiJ_G0022739Patl19830.084Mus_caroli
ENSLACG00000005291-9730.170ENSMUSG00000046139Patl19830.084Mus_musculus
ENSLACG00000005291-5343.365ENSMUSG00000027233Patl27743.365Mus_musculus
ENSLACG00000005291-6141.408MGP_PahariEiJ_G0025648Patl28641.615Mus_pahari
ENSLACG00000005291-9730.170MGP_SPRETEiJ_G0023652Patl19830.084Mus_spretus
ENSLACG00000005291-6141.529MGP_SPRETEiJ_G0025122Patl28641.116Mus_spretus
ENSLACG00000005291-9730.676ENSMPUG00000014607PATL19830.779Mustela_putorius_furo
ENSLACG00000005291-9730.172ENSMLUG00000011169PATL19830.864Myotis_lucifugus
ENSLACG00000005291-9730.061ENSNGAG00000003682Patl19930.760Nannospalax_galili
ENSLACG00000005291-5639.823ENSNGAG00000020368Patl28739.606Nannospalax_galili
ENSLACG00000005291-7445.088ENSNBRG00000011745patl29540.346Neolamprologus_brichardi
ENSLACG00000005291-6044.979ENSNLEG00000005673PATL28244.864Nomascus_leucogenys
ENSLACG00000005291-9730.397ENSNLEG00000013081PATL19930.846Nomascus_leucogenys
ENSLACG00000005291-5336.855ENSONIG00000004170patl15335.891Oreochromis_niloticus
ENSLACG00000005291-9841.270ENSONIG00000011519patl29540.608Oreochromis_niloticus
ENSLACG00000005291-5343.839ENSOANG00000001538-9144.917Ornithorhynchus_anatinus
ENSLACG00000005291-5942.585ENSOCUG00000006339PATL28541.684Oryctolagus_cuniculus
ENSLACG00000005291-9730.704ENSOCUG00000002156PATL19830.938Oryctolagus_cuniculus
ENSLACG00000005291-5851.242ENSORLG00000005780patl29341.509Oryzias_latipes
ENSLACG00000005291-5950.330ENSORLG00020016506patl29041.240Oryzias_latipes_hni
ENSLACG00000005291-5851.242ENSORLG00015014500patl29341.509Oryzias_latipes_hsok
ENSLACG00000005291-5239.558ENSORLG00015022240patl15537.500Oryzias_latipes_hsok
ENSLACG00000005291-8566.667ENSOMEG00000021628patl29341.914Oryzias_melastigma
ENSLACG00000005291-6043.803ENSOGAG00000004709PATL28143.923Otolemur_garnettii
ENSLACG00000005291-5543.548ENSOARG00000003762PATL27743.548Ovis_aries
ENSLACG00000005291-9730.617ENSPPAG00000034275PATL19831.064Pan_paniscus
ENSLACG00000005291-6044.513ENSPPAG00000007221PATL28044.444Pan_paniscus
ENSLACG00000005291-6042.708ENSPPRG00000004279PATL28242.412Panthera_pardus
ENSLACG00000005291-6235.938ENSPPRG00000020639PATL19830.572Panthera_pardus
ENSLACG00000005291-6042.917ENSPTIG00000018964PATL28242.620Panthera_tigris_altaica
ENSLACG00000005291-6036.000ENSPTIG00000019298PATL19830.572Panthera_tigris_altaica
ENSLACG00000005291-6044.561ENSPTRG00000041536PATL28044.444Pan_troglodytes
ENSLACG00000005291-6044.561ENSPANG00000018026PATL28144.444Papio_anubis
ENSLACG00000005291-9730.377ENSPANG00000035620PATL19830.572Papio_anubis
ENSLACG00000005291-9943.864ENSPKIG00000016887patl29644.661Paramormyrops_kingsleyae
ENSLACG00000005291-5337.101ENSPKIG00000016224patl19931.652Paramormyrops_kingsleyae
ENSLACG00000005291-9730.061ENSPSIG00000016206PATL19330.061Pelodiscus_sinensis
ENSLACG00000005291-7045.037ENSPSIG00000017690PATL29450.758Pelodiscus_sinensis
ENSLACG00000005291-5338.142ENSPMGG00000002644patl15138.177Periophthalmus_magnuspinnatus
ENSLACG00000005291-7441.768ENSPMGG00000014550patl28741.594Periophthalmus_magnuspinnatus
ENSLACG00000005291-9730.556ENSPEMG00000014215Patl19831.060Peromyscus_maniculatus_bairdii
ENSLACG00000005291-5344.787ENSPEMG00000016509Patl27644.787Peromyscus_maniculatus_bairdii
ENSLACG00000005291-6044.350ENSPCIG00000018256PATL28944.350Phascolarctos_cinereus
ENSLACG00000005291-9830.109ENSPCIG00000010852PATL19830.218Phascolarctos_cinereus
ENSLACG00000005291-5337.288ENSPFOG00000007768patl15037.288Poecilia_formosa
ENSLACG00000005291-9740.721ENSPFOG00000007305patl29540.988Poecilia_formosa
ENSLACG00000005291-9741.389ENSPLAG00000020713patl29541.777Poecilia_latipinna
ENSLACG00000005291-9740.854ENSPMEG00000018942patl29541.145Poecilia_mexicana
ENSLACG00000005291-7938.935ENSPREG00000023066patl28838.602Poecilia_reticulata
ENSLACG00000005291-9730.377ENSPPYG00000003230PATL19830.572Pongo_abelii
ENSLACG00000005291-6044.754ENSPCOG00000000295PATL29946.757Propithecus_coquereli
ENSLACG00000005291-9730.952ENSPCOG00000020770PATL19831.658Propithecus_coquereli
ENSLACG00000005291-6232.806ENSPVAG00000015239PATL17831.499Pteropus_vampyrus
ENSLACG00000005291-6547.896ENSPNYG00000017381patl29247.505Pundamilia_nyererei
ENSLACG00000005291-9741.984ENSPNAG00000002315patl29442.062Pygocentrus_nattereri
ENSLACG00000005291-5336.829ENSPNAG00000017907patl15037.470Pygocentrus_nattereri
ENSLACG00000005291-5941.970ENSRNOG00000017061Patl28441.756Rattus_norvegicus
ENSLACG00000005291-9730.314ENSRNOG00000021052Patl19830.938Rattus_norvegicus
ENSLACG00000005291-6044.872ENSRBIG00000040369PATL28145.032Rhinopithecus_bieti
ENSLACG00000005291-6045.085ENSRROG00000028786PATL28145.243Rhinopithecus_roxellana
ENSLACG00000005291-9730.583ENSRROG00000032861PATL19830.572Rhinopithecus_roxellana
ENSLACG00000005291-6243.145ENSSBOG00000034766PATL28443.232Saimiri_boliviensis_boliviensis
ENSLACG00000005291-9730.322ENSSBOG00000025195PATL19831.056Saimiri_boliviensis_boliviensis
ENSLACG00000005291-8446.423ENSSFOG00015000720patl29744.243Scleropages_formosus
ENSLACG00000005291-5336.675ENSSMAG00000009482patl15235.010Scophthalmus_maximus
ENSLACG00000005291-5952.735ENSSMAG00000017262patl29451.204Scophthalmus_maximus
ENSLACG00000005291-8144.855ENSSDUG00000022927patl29542.112Seriola_dumerili
ENSLACG00000005291-8143.339ENSSLDG00000017922patl29840.454Seriola_lalandi_dorsalis
ENSLACG00000005291-6434.717ENSSARG00000009600PATL16735.038Sorex_araneus
ENSLACG00000005291-5145.343ENSSARG00000009047PATL27744.963Sorex_araneus
ENSLACG00000005291-9730.276ENSSPUG00000009453PATL19830.779Sphenodon_punctatus
ENSLACG00000005291-5336.029ENSSPAG00000003187patl15236.453Stegastes_partitus
ENSLACG00000005291-5751.481ENSSPAG00000004784patl26451.253Stegastes_partitus
ENSLACG00000005291-9730.218ENSSSCG00000013124PATL19732.413Sus_scrofa
ENSLACG00000005291-9731.257ENSTGUG00000006222PATL19831.687Taeniopygia_guttata
ENSLACG00000005291-5048.866ENSTGUG00000004619-9748.615Taeniopygia_guttata
ENSLACG00000005291-5337.561ENSTRUG00000000709patl15736.080Takifugu_rubripes
ENSLACG00000005291-8144.534ENSTRUG00000005647patl29542.533Takifugu_rubripes
ENSLACG00000005291-8039.759ENSTBEG00000000796PATL18139.759Tupaia_belangeri
ENSLACG00000005291-6043.763ENSUAMG00000018533PATL28043.187Ursus_americanus
ENSLACG00000005291-9730.461ENSUMAG00000018634PATL19931.026Ursus_maritimus
ENSLACG00000005291-6043.975ENSUMAG00000007738PATL28043.396Ursus_maritimus
ENSLACG00000005291-6045.378ENSVVUG00000011576PATL28245.168Vulpes_vulpes
ENSLACG00000005291-9731.195ENSVVUG00000016668PATL19831.533Vulpes_vulpes
ENSLACG00000005291-9947.458ENSXETG00000014167patl29951.378Xenopus_tropicalis
ENSLACG00000005291-5239.454ENSXCOG00000010808patl16939.206Xiphophorus_couchianus
ENSLACG00000005291-9940.079ENSXMAG00000018464patl29640.530Xiphophorus_maculatus

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