EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005311 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 5966 bases
Position: chrJH129284.1:161688-167653
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005982	Ribosomal_L13e	PF01294.18	4.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006034	-	360	XM_006011390	ENSLACP00000005982	119 (aa)	-	H3A8L1

Gene Model

Click here to download ENSLACG00000005311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005311	-	57	85.294	ENSLACG00000001306	-	51	85.294
ENSLACG00000005311	-	100	84.034	ENSLACG00000013768	rpl13	56	84.034
ENSLACG00000005311	-	100	78.151	ENSLACG00000000752	-	60	78.151
ENSLACG00000005311	-	100	75.630	ENSLACG00000004644	-	65	75.630
ENSLACG00000005311	-	96	76.271	ENSLACG00000002299	-	56	76.271
ENSLACG00000005311	-	99	85.593	ENSLACG00000014843	-	87	85.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005311	-	100	79.832	ENSG00000167526	RPL13	100	81.481	Homo_sapiens
ENSLACG00000005311	-	100	81.513	ENSAPOG00000010933	rpl13	56	81.513	Acanthochromis_polyacanthus
ENSLACG00000005311	-	100	80.672	ENSAMEG00000001111	RPL13	60	80.672	Ailuropoda_melanoleuca
ENSLACG00000005311	-	100	81.513	ENSACIG00000000422	rpl13	56	81.513	Amphilophus_citrinellus
ENSLACG00000005311	-	100	81.513	ENSAOCG00000014635	rpl13	56	81.513	Amphiprion_ocellaris
ENSLACG00000005311	-	100	82.353	ENSAPEG00000011271	rpl13	56	82.353	Amphiprion_percula
ENSLACG00000005311	-	100	81.513	ENSATEG00000004902	rpl13	56	81.513	Anabas_testudineus
ENSLACG00000005311	-	100	79.832	ENSACAG00000017072	RPL13	56	79.832	Anolis_carolinensis
ENSLACG00000005311	-	100	79.832	ENSANAG00000030539	RPL13	56	79.832	Aotus_nancymaae
ENSLACG00000005311	-	100	82.353	ENSACLG00000001642	rpl13	56	82.353	Astatotilapia_calliptera
ENSLACG00000005311	-	100	79.832	ENSAMXG00000006495	rpl13	56	79.832	Astyanax_mexicanus
ENSLACG00000005311	-	100	73.109	ENSBTAG00000033143	-	56	73.109	Bos_taurus
ENSLACG00000005311	-	96	49.123	WBGene00004425	rpl-13	55	49.123	Caenorhabditis_elegans
ENSLACG00000005311	-	99	81.356	ENSCJAG00000016268	-	56	81.356	Callithrix_jacchus
ENSLACG00000005311	-	100	79.832	ENSCJAG00000009672	-	56	79.832	Callithrix_jacchus
ENSLACG00000005311	-	100	80.672	ENSCAFG00000019840	RPL13	56	80.672	Canis_familiaris
ENSLACG00000005311	-	93	52.252	ENSCAFG00000002388	-	61	52.252	Canis_familiaris
ENSLACG00000005311	-	100	80.672	ENSCAFG00020005125	RPL13	56	80.672	Canis_lupus_dingo
ENSLACG00000005311	-	100	71.429	ENSCAFG00020024795	-	56	71.429	Canis_lupus_dingo
ENSLACG00000005311	-	100	79.832	ENSCHIG00000001441	-	58	80.734	Capra_hircus
ENSLACG00000005311	-	98	70.940	ENSCHIG00000026795	-	53	70.940	Capra_hircus
ENSLACG00000005311	-	100	80.672	ENSTSYG00000027423	RPL13	56	80.672	Carlito_syrichta
ENSLACG00000005311	-	100	80.672	ENSCPOG00000027348	RPL13	56	80.672	Cavia_porcellus
ENSLACG00000005311	-	100	79.832	ENSCCAG00000024248	RPL13	56	79.832	Cebus_capucinus
ENSLACG00000005311	-	98	58.974	ENSCATG00000038806	-	53	58.974	Cercocebus_atys
ENSLACG00000005311	-	100	80.672	ENSCATG00000042426	RPL13	57	80.672	Cercocebus_atys
ENSLACG00000005311	-	100	80.672	ENSCLAG00000003801	RPL13	56	80.672	Chinchilla_lanigera
ENSLACG00000005311	-	100	80.672	ENSCSAG00000000476	-	56	80.672	Chlorocebus_sabaeus
ENSLACG00000005311	-	100	81.513	ENSCPBG00000013618	RPL13	56	81.513	Chrysemys_picta_bellii
ENSLACG00000005311	-	99	61.983	ENSCING00000002582	-	55	61.983	Ciona_intestinalis
ENSLACG00000005311	-	94	56.250	ENSCSAVG00000007075	-	55	62.712	Ciona_savignyi
ENSLACG00000005311	-	100	80.672	ENSCANG00000028258	RPL13	64	80.672	Colobus_angolensis_palliatus
ENSLACG00000005311	-	100	69.748	ENSCGRG00001023328	-	57	69.748	Cricetulus_griseus_chok1gshd
ENSLACG00000005311	-	100	61.345	ENSCGRG00001008381	-	61	61.345	Cricetulus_griseus_chok1gshd
ENSLACG00000005311	-	100	80.672	ENSCGRG00001022563	Rpl13	56	80.672	Cricetulus_griseus_chok1gshd
ENSLACG00000005311	-	86	64.706	ENSCGRG00000016503	-	59	64.706	Cricetulus_griseus_crigri
ENSLACG00000005311	-	100	79.832	ENSCGRG00000014556	Rpl13	56	79.832	Cricetulus_griseus_crigri
ENSLACG00000005311	-	100	82.353	ENSCSEG00000008346	rpl13	63	82.353	Cynoglossus_semilaevis
ENSLACG00000005311	-	100	82.353	ENSCVAG00000019742	rpl13	56	82.353	Cyprinodon_variegatus
ENSLACG00000005311	-	100	78.151	ENSDARG00000099380	rpl13	56	78.151	Danio_rerio
ENSLACG00000005311	-	100	79.832	ENSDNOG00000034247	RPL13	56	79.832	Dasypus_novemcinctus
ENSLACG00000005311	-	100	78.992	ENSDORG00000028330	Rpl13	70	78.992	Dipodomys_ordii
ENSLACG00000005311	-	96	57.983	FBgn0011272	RpL13	53	57.983	Drosophila_melanogaster
ENSLACG00000005311	-	96	59.322	ENSETEG00000015057	-	55	59.322	Echinops_telfairi
ENSLACG00000005311	-	81	55.208	ENSETEG00000004518	-	51	55.208	Echinops_telfairi
ENSLACG00000005311	-	100	55.462	ENSEBUG00000000730	rpl13	56	55.462	Eptatretus_burgeri
ENSLACG00000005311	-	98	57.265	ENSEEUG00000006113	-	60	57.265	Erinaceus_europaeus
ENSLACG00000005311	-	100	74.790	ENSELUG00000014509	rpl13	56	74.790	Esox_lucius
ENSLACG00000005311	-	100	77.311	ENSFCAG00000003338	RPL13	56	77.311	Felis_catus
ENSLACG00000005311	-	100	78.151	ENSFALG00000003173	RPL13	56	78.151	Ficedula_albicollis
ENSLACG00000005311	-	100	80.672	ENSFDAG00000011310	RPL13	56	80.672	Fukomys_damarensis
ENSLACG00000005311	-	100	83.193	ENSFHEG00000006122	rpl13	56	83.193	Fundulus_heteroclitus
ENSLACG00000005311	-	100	76.471	ENSGMOG00000002752	rpl13	57	76.471	Gadus_morhua
ENSLACG00000005311	-	100	80.672	ENSGALG00000006179	RPL13	61	80.672	Gallus_gallus
ENSLACG00000005311	-	100	71.429	ENSGAFG00000017260	rpl13	53	71.429	Gambusia_affinis
ENSLACG00000005311	-	100	78.151	ENSGACG00000015752	rpl13	56	78.151	Gasterosteus_aculeatus
ENSLACG00000005311	-	100	82.353	ENSGAGG00000003371	RPL13	56	82.353	Gopherus_agassizii
ENSLACG00000005311	-	100	80.672	ENSGGOG00000025427	RPL13	68	80.672	Gorilla_gorilla
ENSLACG00000005311	-	99	62.712	ENSGGOG00000026762	-	54	62.712	Gorilla_gorilla
ENSLACG00000005311	-	100	82.353	ENSHBUG00000013579	rpl13	56	82.353	Haplochromis_burtoni
ENSLACG00000005311	-	100	79.832	ENSHGLG00000010880	RPL13	56	79.832	Heterocephalus_glaber_female
ENSLACG00000005311	-	100	79.832	ENSHGLG00100018449	RPL13	56	79.832	Heterocephalus_glaber_male
ENSLACG00000005311	-	100	78.992	ENSHCOG00000002997	rpl13	56	78.992	Hippocampus_comes
ENSLACG00000005311	-	100	73.950	ENSIPUG00000009775	rpl13	56	73.950	Ictalurus_punctatus
ENSLACG00000005311	-	100	80.672	ENSSTOG00000011963	RPL13	57	80.672	Ictidomys_tridecemlineatus
ENSLACG00000005311	-	100	66.387	ENSJJAG00000000236	-	57	66.387	Jaculus_jaculus
ENSLACG00000005311	-	100	78.992	ENSJJAG00000014012	Rpl13	56	78.992	Jaculus_jaculus
ENSLACG00000005311	-	100	83.193	ENSKMAG00000006540	rpl13	56	83.193	Kryptolebias_marmoratus
ENSLACG00000005311	-	100	82.353	ENSLBEG00000026455	rpl13	56	82.353	Labrus_bergylta
ENSLACG00000005311	-	100	81.513	ENSLOCG00000004063	rpl13	56	81.513	Lepisosteus_oculatus
ENSLACG00000005311	-	100	78.151	ENSLAFG00000004054	RPL13	56	78.151	Loxodonta_africana
ENSLACG00000005311	-	99	57.627	ENSMFAG00000046109	-	54	57.627	Macaca_fascicularis
ENSLACG00000005311	-	100	80.672	ENSMFAG00000027717	-	57	80.672	Macaca_fascicularis
ENSLACG00000005311	-	98	58.120	ENSMMUG00000038060	-	55	58.120	Macaca_mulatta
ENSLACG00000005311	-	100	80.672	ENSMMUG00000017928	RPL13	56	80.672	Macaca_mulatta
ENSLACG00000005311	-	98	58.974	ENSMNEG00000030483	-	53	58.974	Macaca_nemestrina
ENSLACG00000005311	-	97	70.940	ENSMNEG00000033097	-	52	79.730	Macaca_nemestrina
ENSLACG00000005311	-	98	59.829	ENSMLEG00000033776	-	53	59.829	Mandrillus_leucophaeus
ENSLACG00000005311	-	100	83.193	ENSMAMG00000021552	rpl13	56	83.193	Mastacembelus_armatus
ENSLACG00000005311	-	100	82.353	ENSMZEG00005014343	rpl13	56	82.353	Maylandia_zebra
ENSLACG00000005311	-	100	80.672	ENSMGAG00000008027	RPL13	67	80.672	Meleagris_gallopavo
ENSLACG00000005311	-	100	80.672	ENSMAUG00000016802	-	56	80.672	Mesocricetus_auratus
ENSLACG00000005311	-	100	80.672	ENSMICG00000043954	-	56	80.672	Microcebus_murinus
ENSLACG00000005311	-	100	81.513	ENSMOCG00000002216	-	56	81.513	Microtus_ochrogaster
ENSLACG00000005311	-	80	76.842	ENSMOCG00000011602	-	53	76.842	Microtus_ochrogaster
ENSLACG00000005311	-	100	76.471	ENSMOCG00000016985	-	58	76.471	Microtus_ochrogaster
ENSLACG00000005311	-	100	80.672	ENSMOCG00000009058	-	56	80.672	Microtus_ochrogaster
ENSLACG00000005311	-	100	73.109	ENSMOCG00000021875	-	57	73.109	Microtus_ochrogaster
ENSLACG00000005311	-	100	80.672	ENSMMOG00000016577	rpl13	56	80.672	Mola_mola
ENSLACG00000005311	-	100	81.513	ENSMODG00000003663	RPL13	56	81.513	Monodelphis_domestica
ENSLACG00000005311	-	100	81.513	ENSMALG00000020934	rpl13	56	81.513	Monopterus_albus
ENSLACG00000005311	-	100	80.672	MGP_CAROLIEiJ_G0031676	Rpl13	56	80.672	Mus_caroli
ENSLACG00000005311	-	100	80.672	ENSMUSG00000000740	Rpl13	56	80.672	Mus_musculus
ENSLACG00000005311	-	100	80.672	MGP_PahariEiJ_G0023274	Rpl13	56	80.672	Mus_pahari
ENSLACG00000005311	-	56	68.657	MGP_PahariEiJ_G0022842	-	56	68.657	Mus_pahari
ENSLACG00000005311	-	100	80.672	MGP_SPRETEiJ_G0032794	Rpl13	56	80.672	Mus_spretus
ENSLACG00000005311	-	100	43.697	ENSMPUG00000001481	-	54	43.697	Mustela_putorius_furo
ENSLACG00000005311	-	100	80.672	ENSMLUG00000010950	RPL13	53	80.672	Myotis_lucifugus
ENSLACG00000005311	-	100	51.261	ENSNGAG00000012072	-	63	51.261	Nannospalax_galili
ENSLACG00000005311	-	88	63.810	ENSNGAG00000014655	-	57	63.810	Nannospalax_galili
ENSLACG00000005311	-	100	80.672	ENSNGAG00000018467	Rpl13	56	80.672	Nannospalax_galili
ENSLACG00000005311	-	100	83.193	ENSNBRG00000011031	rpl13	56	83.193	Neolamprologus_brichardi
ENSLACG00000005311	-	100	80.672	ENSNLEG00000015774	RPL13	56	80.672	Nomascus_leucogenys
ENSLACG00000005311	-	98	65.812	ENSNLEG00000028759	-	53	65.812	Nomascus_leucogenys
ENSLACG00000005311	-	100	78.992	ENSODEG00000019297	-	57	78.992	Octodon_degus
ENSLACG00000005311	-	100	77.311	ENSODEG00000019915	-	56	77.311	Octodon_degus
ENSLACG00000005311	-	100	78.151	ENSODEG00000020384	-	56	78.151	Octodon_degus
ENSLACG00000005311	-	100	77.311	ENSODEG00000019351	-	58	77.311	Octodon_degus
ENSLACG00000005311	-	100	78.992	ENSODEG00000004235	-	56	78.992	Octodon_degus
ENSLACG00000005311	-	100	79.832	ENSODEG00000019458	-	56	79.832	Octodon_degus
ENSLACG00000005311	-	100	83.193	ENSONIG00000005934	rpl13	56	83.193	Oreochromis_niloticus
ENSLACG00000005311	-	100	79.832	ENSOANG00000006729	RPL13	56	79.832	Ornithorhynchus_anatinus
ENSLACG00000005311	-	100	79.832	ENSOCUG00000024415	-	59	79.832	Oryctolagus_cuniculus
ENSLACG00000005311	-	100	78.992	ENSOCUG00000022399	-	59	78.992	Oryctolagus_cuniculus
ENSLACG00000005311	-	100	79.832	ENSOCUG00000007536	-	59	79.832	Oryctolagus_cuniculus
ENSLACG00000005311	-	100	82.353	ENSORLG00000007654	rpl13	56	82.353	Oryzias_latipes
ENSLACG00000005311	-	100	83.193	ENSORLG00020009960	rpl13	56	83.193	Oryzias_latipes_hni
ENSLACG00000005311	-	100	83.193	ENSORLG00015008108	rpl13	56	83.193	Oryzias_latipes_hsok
ENSLACG00000005311	-	100	83.193	ENSOMEG00000001728	rpl13	56	83.193	Oryzias_melastigma
ENSLACG00000005311	-	100	79.832	ENSOGAG00000026444	RPL13	56	79.832	Otolemur_garnettii
ENSLACG00000005311	-	99	81.356	ENSPPAG00000029415	-	67	81.356	Pan_paniscus
ENSLACG00000005311	-	99	73.729	ENSPPAG00000042590	-	52	73.729	Pan_paniscus
ENSLACG00000005311	-	99	61.864	ENSPPAG00000041631	-	54	61.864	Pan_paniscus
ENSLACG00000005311	-	100	77.311	ENSPPRG00000003949	RPL13	56	77.311	Panthera_pardus
ENSLACG00000005311	-	100	76.471	ENSPTIG00000010985	RPL13	78	76.471	Panthera_tigris_altaica
ENSLACG00000005311	-	100	73.109	ENSPTRG00000041770	-	54	73.109	Pan_troglodytes
ENSLACG00000005311	-	100	80.672	ENSPTRG00000008480	RPL13	56	80.672	Pan_troglodytes
ENSLACG00000005311	-	99	61.017	ENSPTRG00000047911	-	54	61.017	Pan_troglodytes
ENSLACG00000005311	-	100	80.672	ENSPANG00000031667	RPL13	56	80.672	Papio_anubis
ENSLACG00000005311	-	100	80.672	ENSPKIG00000001789	rpl13	56	80.672	Paramormyrops_kingsleyae
ENSLACG00000005311	-	100	82.353	ENSPSIG00000015634	RPL13	56	82.353	Pelodiscus_sinensis
ENSLACG00000005311	-	100	80.672	ENSPMGG00000006067	rpl13	56	80.672	Periophthalmus_magnuspinnatus
ENSLACG00000005311	-	100	80.672	ENSPEMG00000010342	Rpl13	56	80.672	Peromyscus_maniculatus_bairdii
ENSLACG00000005311	-	100	83.193	ENSPFOG00000013435	rpl13	56	83.193	Poecilia_formosa
ENSLACG00000005311	-	100	83.193	ENSPLAG00000004085	rpl13	56	83.193	Poecilia_latipinna
ENSLACG00000005311	-	100	83.193	ENSPMEG00000015599	rpl13	56	83.193	Poecilia_mexicana
ENSLACG00000005311	-	100	83.193	ENSPREG00000023190	rpl13	56	83.193	Poecilia_reticulata
ENSLACG00000005311	-	100	78.992	ENSPCAG00000015461	RPL13	57	78.992	Procavia_capensis
ENSLACG00000005311	-	100	79.832	ENSPCOG00000024647	RPL13	56	79.832	Propithecus_coquereli
ENSLACG00000005311	-	100	75.630	ENSPVAG00000015130	RPL13	56	75.630	Pteropus_vampyrus
ENSLACG00000005311	-	100	82.353	ENSPNYG00000013189	rpl13	56	82.353	Pundamilia_nyererei
ENSLACG00000005311	-	100	80.672	ENSPNAG00000002916	rpl13	56	80.672	Pygocentrus_nattereri
ENSLACG00000005311	-	100	78.992	ENSRNOG00000055911	LOC100361259	57	78.992	Rattus_norvegicus
ENSLACG00000005311	-	100	79.832	ENSRNOG00000061438	LOC100360491	56	79.832	Rattus_norvegicus
ENSLACG00000005311	-	100	79.832	ENSRNOG00000015335	Rpl13	56	79.832	Rattus_norvegicus
ENSLACG00000005311	-	100	76.471	ENSRNOG00000029227	AABR07054469.1	56	76.471	Rattus_norvegicus
ENSLACG00000005311	-	99	79.661	ENSRNOG00000059545	AC114446.1	58	79.661	Rattus_norvegicus
ENSLACG00000005311	-	100	80.672	ENSRBIG00000031937	RPL13	56	80.672	Rhinopithecus_bieti
ENSLACG00000005311	-	100	80.672	ENSRROG00000036999	-	56	80.672	Rhinopithecus_roxellana
ENSLACG00000005311	-	86	35.294	YMR142C	RPL13B	54	41.176	Saccharomyces_cerevisiae
ENSLACG00000005311	-	86	38.235	YDL082W	RPL13A	54	41.176	Saccharomyces_cerevisiae
ENSLACG00000005311	-	100	79.832	ENSSBOG00000028589	-	56	79.832	Saimiri_boliviensis_boliviensis
ENSLACG00000005311	-	83	67.677	ENSSBOG00000019618	-	52	67.677	Saimiri_boliviensis_boliviensis
ENSLACG00000005311	-	66	64.557	ENSSHAG00000010433	-	51	64.557	Sarcophilus_harrisii
ENSLACG00000005311	-	100	83.193	ENSSFOG00015019594	rpl13	56	83.193	Scleropages_formosus
ENSLACG00000005311	-	100	81.513	ENSSMAG00000021443	rpl13	56	81.513	Scophthalmus_maximus
ENSLACG00000005311	-	100	81.513	ENSSDUG00000001262	rpl13	56	81.513	Seriola_dumerili
ENSLACG00000005311	-	100	81.513	ENSSLDG00000021182	rpl13	56	81.513	Seriola_lalandi_dorsalis
ENSLACG00000005311	-	100	81.513	ENSSPAG00000020434	rpl13	56	81.513	Stegastes_partitus
ENSLACG00000005311	-	97	59.130	ENSSSCG00000007813	-	55	59.130	Sus_scrofa
ENSLACG00000005311	-	99	62.712	ENSSSCG00000003723	-	60	62.712	Sus_scrofa
ENSLACG00000005311	-	100	47.500	ENSSSCG00000033294	-	56	47.500	Sus_scrofa
ENSLACG00000005311	-	100	57.983	ENSSSCG00000029020	-	54	57.983	Sus_scrofa
ENSLACG00000005311	-	100	78.151	ENSSSCG00000024974	RPL13	56	78.151	Sus_scrofa
ENSLACG00000005311	-	100	53.782	ENSSSCG00000036198	-	53	53.782	Sus_scrofa
ENSLACG00000005311	-	100	78.151	ENSTGUG00000007874	RPL13	56	78.151	Taeniopygia_guttata
ENSLACG00000005311	-	100	81.513	ENSTRUG00000021170	rpl13	56	81.513	Takifugu_rubripes
ENSLACG00000005311	-	100	81.513	ENSTNIG00000009349	rpl13	56	81.513	Tetraodon_nigroviridis
ENSLACG00000005311	-	100	79.832	ENSTTRG00000004374	RPL13	56	79.832	Tursiops_truncatus
ENSLACG00000005311	-	100	80.672	ENSUAMG00000020363	RPL13	56	80.672	Ursus_americanus
ENSLACG00000005311	-	99	71.186	ENSVPAG00000000569	-	94	71.186	Vicugna_pacos
ENSLACG00000005311	-	93	51.786	ENSVVUG00000005779	-	52	51.786	Vulpes_vulpes
ENSLACG00000005311	-	100	78.992	ENSVVUG00000003839	-	60	78.992	Vulpes_vulpes
ENSLACG00000005311	-	100	76.471	ENSXETG00000019835	rpl13	56	76.471	Xenopus_tropicalis
ENSLACG00000005311	-	100	82.353	ENSXCOG00000011315	rpl13	56	82.353	Xiphophorus_couchianus
ENSLACG00000005311	-	100	83.193	ENSXMAG00000003221	rpl13	56	83.193	Xiphophorus_maculatus