EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005365 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1297 bases
Position: chrJH130037.1:164340-165636
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006044	RVT_1	PF00078.27	7.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006096	-	1272	-	ENSLACP00000006044	424 (aa)	-	H3A8S3

Gene Model

Click here to download ENSLACG00000005365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005365	-	91	36.750	ENSLACG00000009347	-	64	36.750
ENSLACG00000005365	-	89	36.176	ENSLACG00000015201	-	65	36.176
ENSLACG00000005365	-	53	31.760	ENSLACG00000000029	-	61	31.760
ENSLACG00000005365	-	99	34.096	ENSLACG00000006151	-	54	34.096
ENSLACG00000005365	-	75	50.904	ENSLACG00000012109	-	56	50.904

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005365	-	57	40.964	ENSAPOG00000011439	-	77	40.964	Acanthochromis_polyacanthus
ENSLACG00000005365	-	85	37.121	ENSACLG00000010008	-	58	37.121	Astatotilapia_calliptera
ENSLACG00000005365	-	63	36.268	ENSACLG00000009390	-	82	35.065	Astatotilapia_calliptera
ENSLACG00000005365	-	78	38.462	ENSAMXG00000037637	-	58	38.462	Astyanax_mexicanus
ENSLACG00000005365	-	63	33.574	ENSCPBG00000005584	-	61	33.574	Chrysemys_picta_bellii
ENSLACG00000005365	-	50	31.944	ENSEBUG00000007520	-	82	31.944	Eptatretus_burgeri
ENSLACG00000005365	-	65	40.625	ENSEBUG00000005844	-	63	40.625	Eptatretus_burgeri
ENSLACG00000005365	-	77	33.151	ENSHCOG00000004962	-	51	33.151	Hippocampus_comes
ENSLACG00000005365	-	62	35.294	ENSIPUG00000002895	-	66	35.294	Ictalurus_punctatus
ENSLACG00000005365	-	72	39.466	ENSMALG00000004164	-	56	39.466	Monopterus_albus
ENSLACG00000005365	-	51	42.222	ENSORLG00000028614	-	61	42.222	Oryzias_latipes
ENSLACG00000005365	-	68	40.199	ENSPSIG00000000968	-	96	40.199	Pelodiscus_sinensis
ENSLACG00000005365	-	59	37.643	ENSPFOG00000023854	-	60	37.643	Poecilia_formosa
ENSLACG00000005365	-	54	30.165	ENSPNYG00000002366	-	76	30.165	Pundamilia_nyererei
ENSLACG00000005365	-	63	36.170	ENSXMAG00000024510	-	77	36.170	Xiphophorus_maculatus