EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLACG00000005456 (Gene tree)
Gene ID
102361195
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Plus strand
Length
33580 bases
Position
chrJH127553.1:168406-201985
Accession
102361195
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000006151RRM_1PF00076.222.1e-3812
ENSLACP00000006151RRM_1PF00076.222.1e-3822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000006203PUF60-2011261XM_006004010ENSLACP00000006151366 (aa)-H3A930
Gene Model
Click here to download ENSLACG00000005456's gene model file
Pathways
Pathway IDPathway NameSource
lcm03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005456's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLACG00000005456PUF606331.250ENSLACG00000015227HNRNPAB5430.612
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000005456PUF6010090.710ENSG00000179950PUF609984.783Homo_sapiens
ENSLACG00000005456PUF6010080.217ENSAPOG00000001713puf60b7180.054Acanthochromis_polyacanthus
ENSLACG00000005456PUF609987.603ENSAMEG00000006406PUF606487.603Ailuropoda_melanoleuca
ENSLACG00000005456PUF609970.572ENSACIG00000003263-6972.857Amphilophus_citrinellus
ENSLACG00000005456PUF609978.378ENSACIG00000021705puf60b7078.804Amphilophus_citrinellus
ENSLACG00000005456PUF609980.274ENSAOCG00000015558-6879.726Amphiprion_ocellaris
ENSLACG00000005456PUF6010080.217ENSAOCG00000005395puf60b7180.054Amphiprion_ocellaris
ENSLACG00000005456PUF608383.766ENSAPEG00000001836-7177.208Amphiprion_percula
ENSLACG00000005456PUF6010076.965ENSAPEG00000011923puf60b7076.819Amphiprion_percula
ENSLACG00000005456PUF609977.869ENSATEG00000006303-6877.869Anabas_testudineus
ENSLACG00000005456PUF609979.189ENSATEG00000001730puf60b6880.163Anabas_testudineus
ENSLACG00000005456PUF609991.736ENSAPLG00000010150PUF606991.736Anas_platyrhynchos
ENSLACG00000005456PUF609990.164ENSACAG00000001645PUF606790.164Anolis_carolinensis
ENSLACG00000005456PUF6010090.437ENSANAG00000018626PUF607190.710Aotus_nancymaae
ENSLACG00000005456PUF6010079.133ENSACLG00000004462puf60b7378.706Astatotilapia_calliptera
ENSLACG00000005456PUF608184.122ENSAMXG00000041030puf60b5680.743Astyanax_mexicanus
ENSLACG00000005456PUF609981.522ENSAMXG00000036570puf60a7081.402Astyanax_mexicanus
ENSLACG00000005456PUF6010090.437ENSBTAG00000037493PUF606990.909Bos_taurus
ENSLACG00000005456PUF606156.410WBGene00004389rnp-67156.017Caenorhabditis_elegans
ENSLACG00000005456PUF6010090.437ENSCJAG00000021485PUF606890.909Callithrix_jacchus
ENSLACG00000005456PUF6010090.437ENSCAFG00000001400PUF606790.710Canis_familiaris
ENSLACG00000005456PUF6010090.437ENSCAFG00020018754PUF606890.909Canis_lupus_dingo
ENSLACG00000005456PUF609990.634ENSCHIG00000001618PUF606090.909Capra_hircus
ENSLACG00000005456PUF609990.685ENSTSYG00000011912PUF607090.959Carlito_syrichta
ENSLACG00000005456PUF609792.416ENSCPOG00000014613PUF606592.697Cavia_porcellus
ENSLACG00000005456PUF6010090.164ENSCCAG00000007744PUF606890.634Cebus_capucinus
ENSLACG00000005456PUF6010090.710ENSCATG00000035405PUF606891.185Cercocebus_atys
ENSLACG00000005456PUF6010090.437ENSCLAG00000009154PUF606790.710Chinchilla_lanigera
ENSLACG00000005456PUF609990.909ENSCSAG00000008878PUF607091.185Chlorocebus_sabaeus
ENSLACG00000005456PUF609991.460ENSCPBG00000005595PUF606891.460Chrysemys_picta_bellii
ENSLACG00000005456PUF609947.453ENSCING00000008436-6646.649Ciona_intestinalis
ENSLACG00000005456PUF607459.507ENSCING00000002156-7559.507Ciona_intestinalis
ENSLACG00000005456PUF609951.330ENSCSAVG00000001385-7547.970Ciona_savignyi
ENSLACG00000005456PUF607365.789ENSCSAVG00000004765-7046.027Ciona_savignyi
ENSLACG00000005456PUF609593.064ENSCANG00000041843PUF608294.509Colobus_angolensis_palliatus
ENSLACG00000005456PUF6010090.437ENSCGRG00001017442Puf606790.710Cricetulus_griseus_chok1gshd
ENSLACG00000005456PUF609990.634ENSCGRG00000003717Puf606490.909Cricetulus_griseus_crigri
ENSLACG00000005456PUF609873.077ENSCSEG00000014845-6574.933Cynoglossus_semilaevis
ENSLACG00000005456PUF609980.055ENSCSEG00000019887puf60b6480.601Cynoglossus_semilaevis
ENSLACG00000005456PUF6010078.320ENSCVAG00000009386puf60b7379.515Cyprinodon_variegatus
ENSLACG00000005456PUF609977.198ENSCVAG00000001560-7577.198Cyprinodon_variegatus
ENSLACG00000005456PUF609374.510ENSDARG00000001241puf60b7892.857Danio_rerio
ENSLACG00000005456PUF609982.514ENSDARG00000032175puf60a9677.437Danio_rerio
ENSLACG00000005456PUF609978.788ENSDNOG00000043278PUF606279.063Dasypus_novemcinctus
ENSLACG00000005456PUF6010090.437ENSDORG00000004585Puf606890.710Dipodomys_ordii
ENSLACG00000005456PUF609546.919FBgn0028577hfp7848.122Drosophila_melanogaster
ENSLACG00000005456PUF609957.042ENSEBUG00000014291puf60b6361.124Eptatretus_burgeri
ENSLACG00000005456PUF609870.000ENSEBUG00000005470-6469.444Eptatretus_burgeri
ENSLACG00000005456PUF6010090.437ENSEASG00005009695PUF606890.909Equus_asinus_asinus
ENSLACG00000005456PUF6010090.437ENSECAG00000024681PUF606790.909Equus_caballus
ENSLACG00000005456PUF6010080.376ENSELUG00000018443-7380.914Esox_lucius
ENSLACG00000005456PUF609976.839ENSELUG00000006507puf60b7373.028Esox_lucius
ENSLACG00000005456PUF6010090.437ENSFCAG00000001045PUF607090.909Felis_catus
ENSLACG00000005456PUF609974.380ENSFALG00000001136PUF606876.099Ficedula_albicollis
ENSLACG00000005456PUF6010090.437ENSFDAG00000017177PUF606790.710Fukomys_damarensis
ENSLACG00000005456PUF609976.712ENSFHEG00000021687PUF607476.438Fundulus_heteroclitus
ENSLACG00000005456PUF6010078.016ENSFHEG00000020046puf60b7380.054Fundulus_heteroclitus
ENSLACG00000005456PUF609673.401ENSGMOG00000006392puf60b5973.401Gadus_morhua
ENSLACG00000005456PUF607495.572ENSGALG00000039901PUF607495.572Gallus_gallus
ENSLACG00000005456PUF609578.674ENSGAFG00000004334-7078.488Gambusia_affinis
ENSLACG00000005456PUF609978.108ENSGAFG00000021040puf60b7080.381Gambusia_affinis
ENSLACG00000005456PUF609968.681ENSGACG00000001484-6967.308Gasterosteus_aculeatus
ENSLACG00000005456PUF609669.969ENSGACG00000004717puf60b6069.969Gasterosteus_aculeatus
ENSLACG00000005456PUF6010091.257ENSGAGG00000013289PUF606691.257Gopherus_agassizii
ENSLACG00000005456PUF6010090.710ENSGGOG00000004646PUF606891.185Gorilla_gorilla
ENSLACG00000005456PUF6010078.591ENSHBUG00000009634-7378.591Haplochromis_burtoni
ENSLACG00000005456PUF6010079.133ENSHBUG00000015118puf60b7378.706Haplochromis_burtoni
ENSLACG00000005456PUF6010090.437ENSHGLG00000006111PUF606790.710Heterocephalus_glaber_female
ENSLACG00000005456PUF6010090.437ENSHGLG00100012362PUF606790.710Heterocephalus_glaber_male
ENSLACG00000005456PUF608073.810ENSHCOG00000000378-5573.810Hippocampus_comes
ENSLACG00000005456PUF6010075.000ENSHCOG00000015541puf60b7476.546Hippocampus_comes
ENSLACG00000005456PUF608186.102ENSIPUG00000004660puf60b5786.102Ictalurus_punctatus
ENSLACG00000005456PUF6010077.628ENSIPUG00000002453puf60a8478.976Ictalurus_punctatus
ENSLACG00000005456PUF609990.634ENSSTOG00000025037PUF606590.909Ictidomys_tridecemlineatus
ENSLACG00000005456PUF6010090.437ENSJJAG00000001076Puf606790.710Jaculus_jaculus
ENSLACG00000005456PUF609775.833ENSKMAG00000010106-6971.658Kryptolebias_marmoratus
ENSLACG00000005456PUF609978.415ENSKMAG00000016745puf60b7079.891Kryptolebias_marmoratus
ENSLACG00000005456PUF609977.596ENSLBEG00000012505puf60b7374.479Labrus_bergylta
ENSLACG00000005456PUF609986.538ENSLOCG00000010106puf60b6886.538Lepisosteus_oculatus
ENSLACG00000005456PUF609988.981ENSLAFG00000022929PUF606589.256Loxodonta_africana
ENSLACG00000005456PUF6010090.710ENSMFAG00000043373PUF606891.185Macaca_fascicularis
ENSLACG00000005456PUF6010090.710ENSMMUG00000013558PUF606891.185Macaca_mulatta
ENSLACG00000005456PUF6010090.710ENSMNEG00000031099PUF606891.185Macaca_nemestrina
ENSLACG00000005456PUF6010090.710ENSMLEG00000040009PUF607390.984Mandrillus_leucophaeus
ENSLACG00000005456PUF609980.874ENSMAMG00000019476-6880.000Mastacembelus_armatus
ENSLACG00000005456PUF609980.874ENSMAMG00000010394puf60b7277.604Mastacembelus_armatus
ENSLACG00000005456PUF609978.689ENSMZEG00005019425-6878.689Maylandia_zebra
ENSLACG00000005456PUF6010079.133ENSMZEG00005018515puf60b7378.706Maylandia_zebra
ENSLACG00000005456PUF609991.736ENSMGAG00000013070PUF607496.310Meleagris_gallopavo
ENSLACG00000005456PUF607996.552ENSMAUG00000014267-7496.552Mesocricetus_auratus
ENSLACG00000005456PUF6010074.590ENSMAUG00000018549-7075.204Mesocricetus_auratus
ENSLACG00000005456PUF6010090.437ENSMICG00000012226PUF606990.909Microcebus_murinus
ENSLACG00000005456PUF6010090.437ENSMOCG00000018780Puf606790.710Microtus_ochrogaster
ENSLACG00000005456PUF609979.781ENSMMOG00000004217puf60b7079.891Mola_mola
ENSLACG00000005456PUF609775.350ENSMMOG00000018059-7776.106Mola_mola
ENSLACG00000005456PUF6010090.437ENSMODG00000009161PUF606890.710Monodelphis_domestica
ENSLACG00000005456PUF609970.109ENSMALG00000006797puf60b6669.565Monopterus_albus
ENSLACG00000005456PUF609976.776ENSMALG00000000200-6876.230Monopterus_albus
ENSLACG00000005456PUF6010090.437MGP_CAROLIEiJ_G0019910Puf606790.710Mus_caroli
ENSLACG00000005456PUF6010090.437ENSMUSG00000002524Puf606790.710Mus_musculus
ENSLACG00000005456PUF6010090.437MGP_PahariEiJ_G0019920Puf606790.710Mus_pahari
ENSLACG00000005456PUF6010090.437MGP_SPRETEiJ_G0020812Puf606790.710Mus_spretus
ENSLACG00000005456PUF609990.358ENSMPUG00000008137PUF606490.634Mustela_putorius_furo
ENSLACG00000005456PUF609989.532ENSMLUG00000000238-6489.807Myotis_lucifugus
ENSLACG00000005456PUF6010086.339ENSMLUG00000013032-7186.612Myotis_lucifugus
ENSLACG00000005456PUF6010090.437ENSNGAG00000000712Puf607090.909Nannospalax_galili
ENSLACG00000005456PUF609978.904ENSNBRG00000017223-6878.904Neolamprologus_brichardi
ENSLACG00000005456PUF609581.356ENSNBRG00000013047puf60b8081.818Neolamprologus_brichardi
ENSLACG00000005456PUF6010090.710ENSNLEG00000002156PUF607190.984Nomascus_leucogenys
ENSLACG00000005456PUF609663.739ENSODEG00000015513-6464.088Octodon_degus
ENSLACG00000005456PUF607496.296ENSODEG00000014024-6796.296Octodon_degus
ENSLACG00000005456PUF609978.962ENSONIG00000014030-6878.962Oreochromis_niloticus
ENSLACG00000005456PUF609978.378ENSONIG00000006247puf60b6878.804Oreochromis_niloticus
ENSLACG00000005456PUF609964.932ENSOANG00000006962PUF606761.157Ornithorhynchus_anatinus
ENSLACG00000005456PUF609974.185ENSORLG00000028655-7076.000Oryzias_latipes
ENSLACG00000005456PUF6010080.217ENSORLG00000012279puf60b7180.217Oryzias_latipes
ENSLACG00000005456PUF609980.328ENSORLG00020007333puf607080.328Oryzias_latipes_hni
ENSLACG00000005456PUF609974.185ENSORLG00020018144-6876.230Oryzias_latipes_hni
ENSLACG00000005456PUF609974.185ENSORLG00015016833-7476.230Oryzias_latipes_hsok
ENSLACG00000005456PUF609979.620ENSORLG00015007718puf60b7079.891Oryzias_latipes_hsok
ENSLACG00000005456PUF609977.719ENSOMEG00000001643puf60b7081.844Oryzias_melastigma
ENSLACG00000005456PUF6010077.446ENSOMEG00000022185-6977.446Oryzias_melastigma
ENSLACG00000005456PUF609990.634ENSOGAG00000006259PUF606590.909Otolemur_garnettii
ENSLACG00000005456PUF609888.268ENSOARG00000016235PUF606788.547Ovis_aries
ENSLACG00000005456PUF6010090.710ENSPPAG00000029933PUF606891.185Pan_paniscus
ENSLACG00000005456PUF6010090.437ENSPPRG00000003257PUF607390.710Panthera_pardus
ENSLACG00000005456PUF6010090.164ENSPTIG00000009795PUF606990.685Panthera_tigris_altaica
ENSLACG00000005456PUF6010090.984ENSPTRG00000043963-6891.460Pan_troglodytes
ENSLACG00000005456PUF6010090.984ENSPTRG00000020670PUF606891.460Pan_troglodytes
ENSLACG00000005456PUF6010090.710ENSPANG00000021936PUF606891.185Papio_anubis
ENSLACG00000005456PUF6010082.609ENSPKIG00000012204puf60b7182.385Paramormyrops_kingsleyae
ENSLACG00000005456PUF6010081.941ENSPKIG00000004295puf60a7891.760Paramormyrops_kingsleyae
ENSLACG00000005456PUF609991.460ENSPSIG00000004679PUF606991.460Pelodiscus_sinensis
ENSLACG00000005456PUF609979.133ENSPMGG00000013444puf60b7080.000Periophthalmus_magnuspinnatus
ENSLACG00000005456PUF6010090.437ENSPEMG00000008820Puf606790.710Peromyscus_maniculatus_bairdii
ENSLACG00000005456PUF605189.172ENSPMAG00000009884puf60b9789.172Petromyzon_marinus
ENSLACG00000005456PUF6010090.437ENSPCIG00000020270PUF606990.909Phascolarctos_cinereus
ENSLACG00000005456PUF6010078.016ENSPFOG00000019217puf60b7180.054Poecilia_formosa
ENSLACG00000005456PUF609976.584ENSPFOG00000011118-6776.584Poecilia_formosa
ENSLACG00000005456PUF609976.309ENSPLAG00000017025-6276.309Poecilia_latipinna
ENSLACG00000005456PUF6010078.016ENSPLAG00000010754puf60b7380.054Poecilia_latipinna
ENSLACG00000005456PUF609976.860ENSPMEG00000009767-6276.860Poecilia_mexicana
ENSLACG00000005456PUF6010078.016ENSPMEG00000000838puf60b7380.054Poecilia_mexicana
ENSLACG00000005456PUF609579.379ENSPREG00000005440puf60b7081.534Poecilia_reticulata
ENSLACG00000005456PUF609593.064ENSPPYG00000018951-8094.509Pongo_abelii
ENSLACG00000005456PUF609592.775ENSPCAG00000014837PUF608294.220Procavia_capensis
ENSLACG00000005456PUF6010090.437ENSPCOG00000027981PUF606990.909Propithecus_coquereli
ENSLACG00000005456PUF6099100.000ENSPVAG00000016167PUF6051100.000Pteropus_vampyrus
ENSLACG00000005456PUF609978.378ENSPNYG00000002556puf60b7078.804Pundamilia_nyererei
ENSLACG00000005456PUF609978.689ENSPNYG00000004273-6878.689Pundamilia_nyererei
ENSLACG00000005456PUF609981.522ENSPNAG00000019909puf60a7281.402Pygocentrus_nattereri
ENSLACG00000005456PUF609376.081ENSPNAG00000019415puf60b6073.547Pygocentrus_nattereri
ENSLACG00000005456PUF6010090.437ENSRNOG00000009960Puf606790.710Rattus_norvegicus
ENSLACG00000005456PUF6010090.710ENSRBIG00000035274PUF606891.185Rhinopithecus_bieti
ENSLACG00000005456PUF6010090.710ENSRROG00000029360PUF606891.185Rhinopithecus_roxellana
ENSLACG00000005456PUF6010088.525ENSSBOG00000027089PUF606988.798Saimiri_boliviensis_boliviensis
ENSLACG00000005456PUF609990.634ENSSHAG00000006668PUF606990.909Sarcophilus_harrisii
ENSLACG00000005456PUF609482.133ENSSFOG00015019619puf60b6982.421Scleropages_formosus
ENSLACG00000005456PUF609982.289ENSSFOG00015019371puf60a7783.924Scleropages_formosus
ENSLACG00000005456PUF609980.109ENSSDUG00000007048-6980.109Seriola_dumerili
ENSLACG00000005456PUF609976.903ENSSDUG00000009935puf60b7081.662Seriola_dumerili
ENSLACG00000005456PUF609979.620ENSSLDG00000007366-7079.620Seriola_lalandi_dorsalis
ENSLACG00000005456PUF609979.189ENSSLDG00000024011puf60b7277.143Seriola_lalandi_dorsalis
ENSLACG00000005456PUF607584.249ENSSPUG00000013518PUF607684.249Sphenodon_punctatus
ENSLACG00000005456PUF6010075.969ENSSPAG00000012144puf60b7277.143Stegastes_partitus
ENSLACG00000005456PUF609979.019ENSSPAG00000020285-7079.019Stegastes_partitus
ENSLACG00000005456PUF6010090.437ENSSSCG00000038800PUF607592.135Sus_scrofa
ENSLACG00000005456PUF605199.359ENSTGUG00000016423-10099.359Taeniopygia_guttata
ENSLACG00000005456PUF609987.052ENSTGUG00000012797-6987.052Taeniopygia_guttata
ENSLACG00000005456PUF609877.031ENSTRUG00000008843-7277.624Takifugu_rubripes
ENSLACG00000005456PUF609979.508ENSTRUG00000005420puf60b7276.562Takifugu_rubripes
ENSLACG00000005456PUF609974.656ENSTNIG00000003069-6876.309Tetraodon_nigroviridis
ENSLACG00000005456PUF609979.781ENSTNIG00000013675puf60b6980.328Tetraodon_nigroviridis
ENSLACG00000005456PUF608193.559ENSTBEG00000002751-9993.559Tupaia_belangeri
ENSLACG00000005456PUF609672.492ENSTBEG00000001899-8974.757Tupaia_belangeri
ENSLACG00000005456PUF609988.705ENSTTRG00000017088PUF607089.256Tursiops_truncatus
ENSLACG00000005456PUF6010090.437ENSUAMG00000024917PUF606890.909Ursus_americanus
ENSLACG00000005456PUF608991.692ENSUMAG00000000272PUF607091.692Ursus_maritimus
ENSLACG00000005456PUF6010090.437ENSVVUG00000022527PUF607090.909Vulpes_vulpes
ENSLACG00000005456PUF6010089.344ENSXETG00000012469puf607289.617Xenopus_tropicalis
ENSLACG00000005456PUF6010078.016ENSXCOG00000012355puf60b7380.054Xiphophorus_couchianus
ENSLACG00000005456PUF6010078.016ENSXMAG00000001862puf60b7080.163Xiphophorus_maculatus
ENSLACG00000005456PUF6010076.776ENSXMAG00000010507-7076.776Xiphophorus_maculatus

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