EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005534 (Gene tree)
Gene ID: 102346571
Gene Symbol: FAM83C
Alias: C20orf128|dJ614O4.7
Full Name: protein FAM83C
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 30852 bases
Position: chrJH128155.1:172231-203082
Accession: 102346571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006239	FAM83	PF07894.12	1.2e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006291	FAM83C-201	1575	XM_006007683	ENSLACP00000006239	525 (aa)	XP_006007745	H3A9B8

Gene Model

Click here to download ENSLACG00000005534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005534	FAM83C	53	31.802	ENSLACG00000011004	FAM83F	92	31.741
ENSLACG00000005534	FAM83C	52	38.043	ENSLACG00000008573	FAM83E	57	38.043
ENSLACG00000005534	FAM83C	63	44.611	ENSLACG00000009464	FAM83A	77	44.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005534	FAM83C	50	63.258	ENSAPOG00000006736	fam83c	67	63.258	Acanthochromis_polyacanthus
ENSLACG00000005534	FAM83C	65	68.750	ENSACIG00000015685	fam83c	98	45.840	Amphilophus_citrinellus
ENSLACG00000005534	FAM83C	98	46.112	ENSAPEG00000023028	fam83c	98	48.288	Amphiprion_percula
ENSLACG00000005534	FAM83C	63	62.840	ENSATEG00000008410	fam83c	73	62.840	Anabas_testudineus
ENSLACG00000005534	FAM83C	100	40.631	ENSAPLG00000007684	FAM83C	99	40.631	Anas_platyrhynchos
ENSLACG00000005534	FAM83C	68	50.140	ENSACAG00000005517	FAM83C	94	50.281	Anolis_carolinensis
ENSLACG00000005534	FAM83C	80	63.462	ENSACLG00000013293	fam83c	72	63.462	Astatotilapia_calliptera
ENSLACG00000005534	FAM83C	91	60.053	ENSAMXG00000018399	fam83c	80	60.053	Astyanax_mexicanus
ENSLACG00000005534	FAM83C	66	39.410	ENSCPBG00000002041	FAM83C	58	39.410	Chrysemys_picta_bellii
ENSLACG00000005534	FAM83C	67	65.625	ENSCSEG00000017826	fam83c	67	64.286	Cynoglossus_semilaevis
ENSLACG00000005534	FAM83C	99	44.539	ENSCVAG00000010589	fam83c	99	44.881	Cyprinodon_variegatus
ENSLACG00000005534	FAM83C	62	62.577	ENSDARG00000075296	fam83c	71	62.577	Danio_rerio
ENSLACG00000005534	FAM83C	99	45.593	ENSELUG00000014439	fam83c	98	45.763	Esox_lucius
ENSLACG00000005534	FAM83C	69	47.568	ENSFALG00000012451	FAM83C	90	47.568	Ficedula_albicollis
ENSLACG00000005534	FAM83C	98	42.979	ENSFHEG00000017527	fam83c	71	59.425	Fundulus_heteroclitus
ENSLACG00000005534	FAM83C	58	55.700	ENSGMOG00000003558	fam83c	88	55.700	Gadus_morhua
ENSLACG00000005534	FAM83C	100	50.000	ENSGALG00000031906	FAM83C	92	50.000	Gallus_gallus
ENSLACG00000005534	FAM83C	58	52.922	ENSGACG00000000006	fam83c	85	53.247	Gasterosteus_aculeatus
ENSLACG00000005534	FAM83C	95	41.450	ENSGAGG00000011761	FAM83C	90	41.450	Gopherus_agassizii
ENSLACG00000005534	FAM83C	80	63.782	ENSHBUG00000009655	fam83c	72	63.091	Haplochromis_burtoni
ENSLACG00000005534	FAM83C	99	60.000	ENSHCOG00000014079	fam83c	57	60.000	Hippocampus_comes
ENSLACG00000005534	FAM83C	100	46.233	ENSIPUG00000002046	FAM83C	99	46.552	Ictalurus_punctatus
ENSLACG00000005534	FAM83C	82	62.952	ENSKMAG00000015504	fam83c	69	62.952	Kryptolebias_marmoratus
ENSLACG00000005534	FAM83C	67	65.625	ENSLBEG00000017799	fam83c	72	62.733	Labrus_bergylta
ENSLACG00000005534	FAM83C	99	46.859	ENSLOCG00000007724	fam83c	98	46.859	Lepisosteus_oculatus
ENSLACG00000005534	FAM83C	61	63.750	ENSMAMG00000010316	fam83c	71	64.444	Mastacembelus_armatus
ENSLACG00000005534	FAM83C	81	62.420	ENSMZEG00005009063	fam83c	72	62.420	Maylandia_zebra
ENSLACG00000005534	FAM83C	100	40.741	ENSMGAG00000001956	FAM83C	99	40.741	Meleagris_gallopavo
ENSLACG00000005534	FAM83C	76	47.666	ENSMAUG00000011286	Fam83c	51	47.666	Mesocricetus_auratus
ENSLACG00000005534	FAM83C	84	68.750	ENSMALG00000020114	fam83c	69	63.438	Monopterus_albus
ENSLACG00000005534	FAM83C	73	48.241	ENSMUSG00000074647	Fam83c	50	48.241	Mus_musculus
ENSLACG00000005534	FAM83C	73	47.188	MGP_PahariEiJ_G0025985	Fam83c	50	47.188	Mus_pahari
ENSLACG00000005534	FAM83C	73	48.241	MGP_SPRETEiJ_G0025462	Fam83c	50	48.241	Mus_spretus
ENSLACG00000005534	FAM83C	57	54.967	ENSMLUG00000004473	FAM83C	86	42.178	Myotis_lucifugus
ENSLACG00000005534	FAM83C	70	49.593	ENSNGAG00000010632	Fam83c	51	49.593	Nannospalax_galili
ENSLACG00000005534	FAM83C	64	46.628	ENSMEUG00000007181	FAM83C	53	46.386	Notamacropus_eugenii
ENSLACG00000005534	FAM83C	58	53.618	ENSOPRG00000005474	FAM83C	53	46.420	Ochotona_princeps
ENSLACG00000005534	FAM83C	99	46.939	ENSONIG00000018564	fam83c	99	46.507	Oreochromis_niloticus
ENSLACG00000005534	FAM83C	61	52.174	ENSOCUG00000000488	FAM83C	55	45.708	Oryctolagus_cuniculus
ENSLACG00000005534	FAM83C	63	59.940	ENSORLG00000002950	fam83c	55	59.940	Oryzias_latipes
ENSLACG00000005534	FAM83C	63	59.940	ENSORLG00020001822	fam83c	55	59.940	Oryzias_latipes_hni
ENSLACG00000005534	FAM83C	63	59.940	ENSORLG00015019398	fam83c	55	59.940	Oryzias_latipes_hsok
ENSLACG00000005534	FAM83C	61	60.372	ENSOMEG00000003633	fam83c	53	60.372	Oryzias_melastigma
ENSLACG00000005534	FAM83C	99	47.917	ENSPKIG00000023250	fam83c	98	47.917	Paramormyrops_kingsleyae
ENSLACG00000005534	FAM83C	99	47.527	ENSPMGG00000003433	fam83c	98	47.619	Periophthalmus_magnuspinnatus
ENSLACG00000005534	FAM83C	67	47.632	ENSPCIG00000027973	FAM83C	50	47.429	Phascolarctos_cinereus
ENSLACG00000005534	FAM83C	88	60.606	ENSPFOG00000014676	fam83c	75	61.212	Poecilia_formosa
ENSLACG00000005534	FAM83C	86	60.748	ENSPLAG00000023095	fam83c	73	61.371	Poecilia_latipinna
ENSLACG00000005534	FAM83C	86	60.748	ENSPMEG00000012791	fam83c	73	61.371	Poecilia_mexicana
ENSLACG00000005534	FAM83C	98	45.179	ENSPREG00000021668	fam83c	99	46.071	Poecilia_reticulata
ENSLACG00000005534	FAM83C	81	53.822	ENSPNYG00000019386	fam83c	70	53.822	Pundamilia_nyererei
ENSLACG00000005534	FAM83C	99	45.050	ENSPNAG00000011432	fam83c	98	46.037	Pygocentrus_nattereri
ENSLACG00000005534	FAM83C	73	42.141	ENSSFOG00015004158	fam83c	88	42.369	Scleropages_formosus
ENSLACG00000005534	FAM83C	67	68.750	ENSSMAG00000005706	fam83c	57	68.750	Scophthalmus_maximus
ENSLACG00000005534	FAM83C	98	45.652	ENSSDUG00000017583	fam83c	98	48.457	Seriola_dumerili
ENSLACG00000005534	FAM83C	67	68.750	ENSSLDG00000011527	fam83c	70	63.043	Seriola_lalandi_dorsalis
ENSLACG00000005534	FAM83C	95	43.511	ENSSPUG00000012470	FAM83C	85	43.130	Sphenodon_punctatus
ENSLACG00000005534	FAM83C	69	68.750	ENSSPAG00000017752	fam83c	73	63.444	Stegastes_partitus
ENSLACG00000005534	FAM83C	59	61.812	ENSTNIG00000002833	fam83c	88	59.938	Tetraodon_nigroviridis
ENSLACG00000005534	FAM83C	99	44.569	ENSXETG00000019789	fam83c	99	44.569	Xenopus_tropicalis
ENSLACG00000005534	FAM83C	51	61.935	ENSXCOG00000017358	fam83c	88	37.897	Xiphophorus_couchianus
ENSLACG00000005534	FAM83C	86	61.682	ENSXMAG00000023922	fam83c	73	61.371	Xiphophorus_maculatus