EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005541 (Gene tree)
Gene ID: -
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 12837 bases
Position: chrJH127749.1:172731-185567
Accession: 102346054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006247	RRM_1	PF00076.22	3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006299	TRNAU1AP-201	2072	XM_006005389	ENSLACP00000006247	286 (aa)	XP_006005451	H3A9C6

Gene Model

Click here to download ENSLACG00000005541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005541	TRNAU1AP	71	39.286	ENSLACG00000011907	PABPC4	54	39.286
ENSLACG00000005541	TRNAU1AP	77	30.952	ENSLACG00000005762	PABPC1L	52	32.258
ENSLACG00000005541	TRNAU1AP	71	31.034	ENSLACG00000004395	PABPC1	57	31.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSG00000180098	TRNAU1AP	99	72.632	Homo_sapiens
ENSLACG00000005541	TRNAU1AP	99	52.273	ENSAPOG00000007148	TRNAU1AP	99	51.948	Acanthochromis_polyacanthus
ENSLACG00000005541	TRNAU1AP	99	71.579	ENSAMEG00000011367	TRNAU1AP	99	71.579	Ailuropoda_melanoleuca
ENSLACG00000005541	TRNAU1AP	98	54.483	ENSACIG00000004161	trnau1apa	96	53.103	Amphilophus_citrinellus
ENSLACG00000005541	TRNAU1AP	99	51.148	ENSAOCG00000008056	trnau1apa	99	52.288	Amphiprion_ocellaris
ENSLACG00000005541	TRNAU1AP	99	51.148	ENSAPEG00000008868	trnau1apa	99	52.288	Amphiprion_percula
ENSLACG00000005541	TRNAU1AP	99	52.050	ENSATEG00000012140	trnau1apa	99	49.206	Anabas_testudineus
ENSLACG00000005541	TRNAU1AP	94	71.481	ENSAPLG00000002606	TRNAU1AP	99	71.481	Anas_platyrhynchos
ENSLACG00000005541	TRNAU1AP	99	61.404	ENSACAG00000003995	-	99	61.404	Anolis_carolinensis
ENSLACG00000005541	TRNAU1AP	74	46.445	ENSACAG00000004205	-	88	43.723	Anolis_carolinensis
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSANAG00000018976	TRNAU1AP	99	72.632	Aotus_nancymaae
ENSLACG00000005541	TRNAU1AP	99	51.656	ENSACLG00000018515	trnau1apa	99	51.656	Astatotilapia_calliptera
ENSLACG00000005541	TRNAU1AP	94	53.846	ENSAMXG00000029240	-	97	53.846	Astyanax_mexicanus
ENSLACG00000005541	TRNAU1AP	97	49.474	ENSAMXG00000013750	trnau1apa	92	47.518	Astyanax_mexicanus
ENSLACG00000005541	TRNAU1AP	99	72.982	ENSBTAG00000010393	TRNAU1AP	99	72.982	Bos_taurus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSCJAG00000009717	TRNAU1AP	99	72.632	Callithrix_jacchus
ENSLACG00000005541	TRNAU1AP	99	72.982	ENSCAFG00000011735	TRNAU1AP	99	72.982	Canis_familiaris
ENSLACG00000005541	TRNAU1AP	99	72.982	ENSCAFG00020023584	TRNAU1AP	99	72.982	Canis_lupus_dingo
ENSLACG00000005541	TRNAU1AP	99	72.982	ENSCHIG00000023215	TRNAU1AP	99	72.982	Capra_hircus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSTSYG00000003506	TRNAU1AP	99	72.632	Carlito_syrichta
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSCPOG00000001925	TRNAU1AP	99	72.632	Cavia_porcellus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSCCAG00000037506	TRNAU1AP	99	72.632	Cebus_capucinus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSCATG00000044617	TRNAU1AP	99	72.632	Cercocebus_atys
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSCLAG00000008223	TRNAU1AP	99	72.632	Chinchilla_lanigera
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSCSAG00000001014	TRNAU1AP	99	72.632	Chlorocebus_sabaeus
ENSLACG00000005541	TRNAU1AP	95	72.263	ENSCPBG00000000121	TRNAU1AP	100	72.263	Chrysemys_picta_bellii
ENSLACG00000005541	TRNAU1AP	69	34.498	ENSCSAVG00000011781	-	98	37.004	Ciona_savignyi
ENSLACG00000005541	TRNAU1AP	99	69.366	ENSCANG00000041949	TRNAU1AP	100	77.966	Colobus_angolensis_palliatus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSCGRG00001004713	Trnau1ap	99	72.632	Cricetulus_griseus_chok1gshd
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSCGRG00000014532	Trnau1ap	99	72.632	Cricetulus_griseus_crigri
ENSLACG00000005541	TRNAU1AP	98	49.669	ENSCSEG00000006663	trnau1apa	96	49.505	Cynoglossus_semilaevis
ENSLACG00000005541	TRNAU1AP	96	52.218	ENSCVAG00000018069	trnau1apa	94	52.381	Cyprinodon_variegatus
ENSLACG00000005541	TRNAU1AP	97	44.366	ENSDARG00000101323	trnau1apa	90	43.357	Danio_rerio
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSDNOG00000033009	TRNAU1AP	99	72.632	Dasypus_novemcinctus
ENSLACG00000005541	TRNAU1AP	65	54.839	ENSDNOG00000047959	-	90	57.471	Dasypus_novemcinctus
ENSLACG00000005541	TRNAU1AP	99	67.368	ENSDORG00000006349	Trnau1ap	99	72.052	Dipodomys_ordii
ENSLACG00000005541	TRNAU1AP	95	35.583	FBgn0031607	CG15440	51	44.509	Drosophila_melanogaster
ENSLACG00000005541	TRNAU1AP	84	68.880	ENSETEG00000012594	TRNAU1AP	98	68.880	Echinops_telfairi
ENSLACG00000005541	TRNAU1AP	80	41.489	ENSEBUG00000006349	-	59	41.489	Eptatretus_burgeri
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSEASG00005010062	TRNAU1AP	99	72.632	Equus_asinus_asinus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSECAG00000012980	TRNAU1AP	99	72.632	Equus_caballus
ENSLACG00000005541	TRNAU1AP	99	52.805	ENSELUG00000017686	trnau1apa	99	52.145	Esox_lucius
ENSLACG00000005541	TRNAU1AP	96	51.042	ENSELUG00000022790	-	95	51.042	Esox_lucius
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSFCAG00000013401	TRNAU1AP	99	72.632	Felis_catus
ENSLACG00000005541	TRNAU1AP	95	71.168	ENSFALG00000001371	TRNAU1AP	100	71.168	Ficedula_albicollis
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSFDAG00000018599	TRNAU1AP	99	72.632	Fukomys_damarensis
ENSLACG00000005541	TRNAU1AP	79	53.441	ENSFHEG00000018232	trnau1apa	86	50.000	Fundulus_heteroclitus
ENSLACG00000005541	TRNAU1AP	97	49.141	ENSGMOG00000016508	trnau1apa	95	48.611	Gadus_morhua
ENSLACG00000005541	TRNAU1AP	74	44.635	ENSGALG00000012721	C2H6orf52	92	44.130	Gallus_gallus
ENSLACG00000005541	TRNAU1AP	99	71.228	ENSGALG00000001310	-	99	71.228	Gallus_gallus
ENSLACG00000005541	TRNAU1AP	79	52.500	ENSGAFG00000004928	trnau1apa	90	51.883	Gambusia_affinis
ENSLACG00000005541	TRNAU1AP	98	53.220	ENSGACG00000001443	trnau1apa	96	53.082	Gasterosteus_aculeatus
ENSLACG00000005541	TRNAU1AP	95	72.628	ENSGAGG00000004940	TRNAU1AP	100	72.628	Gopherus_agassizii
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSGGOG00000003511	TRNAU1AP	99	72.632	Gorilla_gorilla
ENSLACG00000005541	TRNAU1AP	99	50.495	ENSHBUG00000002510	trnau1apa	98	50.495	Haplochromis_burtoni
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSHGLG00000010380	TRNAU1AP	99	72.632	Heterocephalus_glaber_female
ENSLACG00000005541	TRNAU1AP	99	70.175	ENSHGLG00100012699	TRNAU1AP	99	70.175	Heterocephalus_glaber_male
ENSLACG00000005541	TRNAU1AP	98	49.164	ENSHCOG00000014770	trnau1apa	96	47.176	Hippocampus_comes
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSSTOG00000000079	TRNAU1AP	99	72.632	Ictidomys_tridecemlineatus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSJJAG00000010128	Trnau1ap	99	72.632	Jaculus_jaculus
ENSLACG00000005541	TRNAU1AP	95	53.082	ENSKMAG00000001230	trnau1apa	94	51.712	Kryptolebias_marmoratus
ENSLACG00000005541	TRNAU1AP	95	53.401	ENSLBEG00000011683	trnau1apa	94	52.174	Labrus_bergylta
ENSLACG00000005541	TRNAU1AP	99	63.194	ENSLOCG00000004041	trnau1apa	99	62.847	Lepisosteus_oculatus
ENSLACG00000005541	TRNAU1AP	99	72.281	ENSLAFG00000007628	TRNAU1AP	99	72.281	Loxodonta_africana
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSMFAG00000043751	TRNAU1AP	99	72.632	Macaca_fascicularis
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSMMUG00000006561	TRNAU1AP	99	72.632	Macaca_mulatta
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSMNEG00000044201	TRNAU1AP	99	72.632	Macaca_nemestrina
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSMLEG00000015649	TRNAU1AP	99	72.632	Mandrillus_leucophaeus
ENSLACG00000005541	TRNAU1AP	99	51.923	ENSMAMG00000001247	trnau1apa	99	51.877	Mastacembelus_armatus
ENSLACG00000005541	TRNAU1AP	99	51.656	ENSMZEG00005017722	trnau1apa	99	51.656	Maylandia_zebra
ENSLACG00000005541	TRNAU1AP	97	70.144	ENSMGAG00000002105	TRNAU1AP	100	70.144	Meleagris_gallopavo
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSMICG00000008386	TRNAU1AP	100	77.966	Microcebus_murinus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSMOCG00000011189	Trnau1ap	99	72.632	Microtus_ochrogaster
ENSLACG00000005541	TRNAU1AP	95	50.730	ENSMMOG00000012107	trnau1apa	92	50.725	Mola_mola
ENSLACG00000005541	TRNAU1AP	99	70.526	ENSMODG00000010927	TRNAU1AP	99	70.526	Monodelphis_domestica
ENSLACG00000005541	TRNAU1AP	96	53.378	ENSMALG00000016778	trnau1apa	94	52.041	Monopterus_albus
ENSLACG00000005541	TRNAU1AP	99	71.930	MGP_CAROLIEiJ_G0026563	Trnau1ap	99	71.930	Mus_caroli
ENSLACG00000005541	TRNAU1AP	99	71.930	ENSMUSG00000028898	Trnau1ap	99	71.930	Mus_musculus
ENSLACG00000005541	TRNAU1AP	99	72.281	MGP_PahariEiJ_G0028896	Trnau1ap	99	72.281	Mus_pahari
ENSLACG00000005541	TRNAU1AP	99	71.930	MGP_SPRETEiJ_G0027544	Trnau1ap	99	71.930	Mus_spretus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSMPUG00000015511	TRNAU1AP	99	72.632	Mustela_putorius_furo
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSMLUG00000012586	TRNAU1AP	99	72.632	Myotis_lucifugus
ENSLACG00000005541	TRNAU1AP	99	72.281	ENSNGAG00000015881	Trnau1ap	99	72.281	Nannospalax_galili
ENSLACG00000005541	TRNAU1AP	99	47.619	ENSNBRG00000001758	trnau1apa	98	48.110	Neolamprologus_brichardi
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSNLEG00000009822	TRNAU1AP	99	72.632	Nomascus_leucogenys
ENSLACG00000005541	TRNAU1AP	97	69.065	ENSMEUG00000006117	TRNAU1AP	100	69.065	Notamacropus_eugenii
ENSLACG00000005541	TRNAU1AP	70	80.000	ENSOPRG00000007084	-	69	80.000	Ochotona_princeps
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSODEG00000002970	TRNAU1AP	99	72.632	Octodon_degus
ENSLACG00000005541	TRNAU1AP	80	48.971	ENSONIG00000004715	trnau1apa	95	50.413	Oreochromis_niloticus
ENSLACG00000005541	TRNAU1AP	99	56.552	ENSOANG00000005325	-	99	57.746	Ornithorhynchus_anatinus
ENSLACG00000005541	TRNAU1AP	87	56.175	ENSOCUG00000006834	-	98	54.980	Oryctolagus_cuniculus
ENSLACG00000005541	TRNAU1AP	99	71.228	ENSOCUG00000011704	-	99	71.228	Oryctolagus_cuniculus
ENSLACG00000005541	TRNAU1AP	99	54.895	ENSOCUG00000002353	-	99	54.895	Oryctolagus_cuniculus
ENSLACG00000005541	TRNAU1AP	96	51.903	ENSORLG00000010428	trnau1apa	94	51.071	Oryzias_latipes
ENSLACG00000005541	TRNAU1AP	96	51.903	ENSORLG00020000926	trnau1ap	94	50.694	Oryzias_latipes_hni
ENSLACG00000005541	TRNAU1AP	96	51.903	ENSORLG00015009858	trnau1ap	94	50.694	Oryzias_latipes_hsok
ENSLACG00000005541	TRNAU1AP	96	52.083	ENSOMEG00000007873	trnau1apa	94	51.042	Oryzias_melastigma
ENSLACG00000005541	TRNAU1AP	99	73.145	ENSOGAG00000002274	TRNAU1AP	99	73.145	Otolemur_garnettii
ENSLACG00000005541	TRNAU1AP	99	72.982	ENSOARG00000002843	TRNAU1AP	99	72.982	Ovis_aries
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSPPAG00000033927	TRNAU1AP	99	72.632	Pan_paniscus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSPPRG00000004416	TRNAU1AP	99	72.632	Panthera_pardus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSPTIG00000016677	TRNAU1AP	99	72.632	Panthera_tigris_altaica
ENSLACG00000005541	TRNAU1AP	91	58.333	ENSPTRG00000000434	-	95	57.197	Pan_troglodytes
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSPANG00000016019	TRNAU1AP	99	72.632	Papio_anubis
ENSLACG00000005541	TRNAU1AP	95	53.521	ENSPKIG00000015511	trnau1apa	93	52.448	Paramormyrops_kingsleyae
ENSLACG00000005541	TRNAU1AP	93	52.747	ENSPKIG00000022205	-	94	52.747	Paramormyrops_kingsleyae
ENSLACG00000005541	TRNAU1AP	95	72.628	ENSPSIG00000006864	TRNAU1AP	100	72.628	Pelodiscus_sinensis
ENSLACG00000005541	TRNAU1AP	94	53.137	ENSPMGG00000023893	trnau1apa	91	52.222	Periophthalmus_magnuspinnatus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSPEMG00000007877	Trnau1ap	99	72.632	Peromyscus_maniculatus_bairdii
ENSLACG00000005541	TRNAU1AP	78	51.121	ENSPMAG00000005934	trnau1apa	99	49.327	Petromyzon_marinus
ENSLACG00000005541	TRNAU1AP	60	47.727	ENSPMAG00000000592	trnau1apa	97	47.727	Petromyzon_marinus
ENSLACG00000005541	TRNAU1AP	95	52.055	ENSPFOG00000008100	trnau1apa	94	51.211	Poecilia_formosa
ENSLACG00000005541	TRNAU1AP	91	51.071	ENSPLAG00000010236	trnau1apa	93	50.181	Poecilia_latipinna
ENSLACG00000005541	TRNAU1AP	95	50.859	ENSPMEG00000016387	trnau1apa	91	50.000	Poecilia_mexicana
ENSLACG00000005541	TRNAU1AP	93	47.312	ENSPREG00000019821	trnau1apa	87	48.120	Poecilia_reticulata
ENSLACG00000005541	TRNAU1AP	99	55.439	ENSPPYG00000001639	-	99	62.109	Pongo_abelii
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSPCOG00000027712	-	100	77.966	Propithecus_coquereli
ENSLACG00000005541	TRNAU1AP	98	59.075	ENSPCOG00000023470	-	100	59.075	Propithecus_coquereli
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSPVAG00000017214	TRNAU1AP	99	72.632	Pteropus_vampyrus
ENSLACG00000005541	TRNAU1AP	99	50.814	ENSPNYG00000010130	trnau1apa	99	50.814	Pundamilia_nyererei
ENSLACG00000005541	TRNAU1AP	97	46.181	ENSPNAG00000024905	trnau1apa	92	44.326	Pygocentrus_nattereri
ENSLACG00000005541	TRNAU1AP	94	66.171	ENSRNOG00000055344	Trnau1ap	92	66.171	Rattus_norvegicus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSRBIG00000029083	TRNAU1AP	99	72.632	Rhinopithecus_bieti
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSRROG00000029128	TRNAU1AP	99	72.632	Rhinopithecus_roxellana
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSSBOG00000021299	TRNAU1AP	99	72.632	Saimiri_boliviensis_boliviensis
ENSLACG00000005541	TRNAU1AP	99	70.526	ENSSHAG00000008108	TRNAU1AP	99	70.526	Sarcophilus_harrisii
ENSLACG00000005541	TRNAU1AP	99	48.397	ENSSMAG00000020851	trnau1apa	99	48.544	Scophthalmus_maximus
ENSLACG00000005541	TRNAU1AP	96	52.685	ENSSDUG00000011734	trnau1apa	94	51.186	Seriola_dumerili
ENSLACG00000005541	TRNAU1AP	96	46.377	ENSSLDG00000012101	trnau1apa	92	46.739	Seriola_lalandi_dorsalis
ENSLACG00000005541	TRNAU1AP	97	71.583	ENSSARG00000007536	TRNAU1AP	100	71.583	Sorex_araneus
ENSLACG00000005541	TRNAU1AP	61	77.143	ENSSPUG00000010415	-	99	77.143	Sphenodon_punctatus
ENSLACG00000005541	TRNAU1AP	99	70.671	ENSSPUG00000010400	-	99	70.671	Sphenodon_punctatus
ENSLACG00000005541	TRNAU1AP	99	52.104	ENSSPAG00000005029	trnau1apa	99	52.769	Stegastes_partitus
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSSSCG00000030284	TRNAU1AP	100	77.966	Sus_scrofa
ENSLACG00000005541	TRNAU1AP	68	51.020	ENSTGUG00000005908	-	100	51.020	Taeniopygia_guttata
ENSLACG00000005541	TRNAU1AP	97	71.583	ENSTGUG00000000735	-	100	71.583	Taeniopygia_guttata
ENSLACG00000005541	TRNAU1AP	99	50.968	ENSTRUG00000003352	trnau1apa	99	50.000	Takifugu_rubripes
ENSLACG00000005541	TRNAU1AP	99	49.511	ENSTNIG00000006129	trnau1apa	99	50.000	Tetraodon_nigroviridis
ENSLACG00000005541	TRNAU1AP	84	63.900	ENSTBEG00000008049	-	98	63.900	Tupaia_belangeri
ENSLACG00000005541	TRNAU1AP	99	72.632	ENSTTRG00000001854	TRNAU1AP	99	72.632	Tursiops_truncatus
ENSLACG00000005541	TRNAU1AP	95	71.533	ENSUAMG00000008789	TRNAU1AP	100	71.533	Ursus_americanus
ENSLACG00000005541	TRNAU1AP	99	72.281	ENSUMAG00000011068	TRNAU1AP	100	77.401	Ursus_maritimus
ENSLACG00000005541	TRNAU1AP	99	64.261	ENSVPAG00000006778	TRNAU1AP	100	63.636	Vicugna_pacos
ENSLACG00000005541	TRNAU1AP	99	71.479	ENSVVUG00000012518	TRNAU1AP	92	71.731	Vulpes_vulpes
ENSLACG00000005541	TRNAU1AP	95	51.370	ENSXMAG00000017361	trnau1apa	94	51.211	Xiphophorus_maculatus