EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005557 (Gene tree)
Gene ID: 102353039
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 179713 bases
Position: chrJH127439.1:173274-352986
Accession: 102353039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006265	ResIII	PF04851.15	7.6e-05	1	1
ENSLACP00000006265	BRK	PF07533.16	2.7e-34	1	2
ENSLACP00000006265	BRK	PF07533.16	2.7e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006318	CHD9-201	12964	XM_006002957	ENSLACP00000006265	2913 (aa)	-	H3A9E4

Gene Model

Click here to download ENSLACG00000005557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005557	CHD9	67	63.919	ENSLACG00000010881	CHD6	75	59.475
ENSLACG00000005557	CHD9	68	61.213	ENSLACG00000011367	CHD8	82	60.131
ENSLACG00000005557	CHD9	82	69.360	ENSLACG00000002461	CHD7	97	51.839

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005557	CHD9	82	75.465	ENSG00000177200	CHD9	100	81.132	Homo_sapiens
ENSLACG00000005557	CHD9	84	66.807	ENSAPOG00000023034	chd9	95	66.653	Acanthochromis_polyacanthus
ENSLACG00000005557	CHD9	99	72.144	ENSAMEG00000016232	CHD9	99	72.026	Ailuropoda_melanoleuca
ENSLACG00000005557	CHD9	79	66.850	ENSACIG00000004097	chd9	72	59.729	Amphilophus_citrinellus
ENSLACG00000005557	CHD9	93	62.397	ENSAOCG00000005487	chd9	96	66.832	Amphiprion_ocellaris
ENSLACG00000005557	CHD9	93	62.411	ENSAPEG00000009859	chd9	95	66.653	Amphiprion_percula
ENSLACG00000005557	CHD9	79	67.304	ENSATEG00000002748	chd9	99	59.739	Anabas_testudineus
ENSLACG00000005557	CHD9	73	74.561	ENSAPLG00000002826	CHD9	74	74.826	Anas_platyrhynchos
ENSLACG00000005557	CHD9	73	73.247	ENSACAG00000016150	CHD9	98	71.615	Anolis_carolinensis
ENSLACG00000005557	CHD9	73	71.998	ENSANAG00000015630	CHD9	98	73.560	Aotus_nancymaae
ENSLACG00000005557	CHD9	79	66.260	ENSACLG00000016899	chd9	99	58.749	Astatotilapia_calliptera
ENSLACG00000005557	CHD9	92	59.536	ENSAMXG00000005652	chd9	98	65.611	Astyanax_mexicanus
ENSLACG00000005557	CHD9	99	71.826	ENSBTAG00000002287	CHD9	99	71.639	Bos_taurus
ENSLACG00000005557	CHD9	99	71.026	ENSCJAG00000001573	CHD9	98	73.373	Callithrix_jacchus
ENSLACG00000005557	CHD9	73	72.694	ENSCAFG00000009699	CHD9	99	72.335	Canis_familiaris
ENSLACG00000005557	CHD9	73	72.694	ENSCAFG00020002879	CHD9	98	73.739	Canis_lupus_dingo
ENSLACG00000005557	CHD9	73	72.184	ENSTSYG00000007693	CHD9	98	74.146	Carlito_syrichta
ENSLACG00000005557	CHD9	78	68.269	ENSCAPG00000011604	CHD9	81	59.174	Cavia_aperea
ENSLACG00000005557	CHD9	73	68.443	ENSCPOG00000036544	CHD9	99	68.930	Cavia_porcellus
ENSLACG00000005557	CHD9	73	71.952	ENSCCAG00000036178	CHD9	98	73.412	Cebus_capucinus
ENSLACG00000005557	CHD9	73	72.122	ENSCATG00000036753	CHD9	98	73.343	Cercocebus_atys
ENSLACG00000005557	CHD9	73	72.127	ENSCLAG00000007137	CHD9	99	77.675	Chinchilla_lanigera
ENSLACG00000005557	CHD9	73	72.076	ENSCSAG00000005311	CHD9	99	71.912	Chlorocebus_sabaeus
ENSLACG00000005557	CHD9	73	88.462	ENSCHOG00000003935	CHD9	76	88.462	Choloepus_hoffmanni
ENSLACG00000005557	CHD9	92	82.107	ENSCPBG00000012459	CHD9	99	82.107	Chrysemys_picta_bellii
ENSLACG00000005557	CHD9	73	71.813	ENSCANG00000030349	CHD9	98	73.343	Colobus_angolensis_palliatus
ENSLACG00000005557	CHD9	73	71.442	ENSCGRG00001016150	Chd9	99	70.948	Cricetulus_griseus_chok1gshd
ENSLACG00000005557	CHD9	73	71.442	ENSCGRG00000012850	Chd9	99	76.755	Cricetulus_griseus_crigri
ENSLACG00000005557	CHD9	80	64.199	ENSCSEG00000009209	chd9	97	63.968	Cynoglossus_semilaevis
ENSLACG00000005557	CHD9	85	66.472	ENSCVAG00000016195	chd9	97	58.947	Cyprinodon_variegatus
ENSLACG00000005557	CHD9	79	65.680	ENSDARG00000074498	chd9	98	64.425	Danio_rerio
ENSLACG00000005557	CHD9	80	75.361	ENSDNOG00000006045	CHD9	99	75.297	Dasypus_novemcinctus
ENSLACG00000005557	CHD9	81	65.929	ENSETEG00000009565	CHD9	93	68.893	Echinops_telfairi
ENSLACG00000005557	CHD9	89	77.831	ENSEASG00005014832	CHD9	99	79.743	Equus_asinus_asinus
ENSLACG00000005557	CHD9	73	72.508	ENSECAG00000011505	CHD9	99	72.335	Equus_caballus
ENSLACG00000005557	CHD9	82	88.398	ENSEEUG00000014515	CHD9	86	88.398	Erinaceus_europaeus
ENSLACG00000005557	CHD9	67	77.083	ENSELUG00000006031	chd9	96	64.469	Esox_lucius
ENSLACG00000005557	CHD9	73	72.462	ENSFCAG00000022534	CHD9	98	73.403	Felis_catus
ENSLACG00000005557	CHD9	82	76.587	ENSFALG00000013276	CHD9	99	76.803	Ficedula_albicollis
ENSLACG00000005557	CHD9	73	71.965	ENSFDAG00000021037	CHD9	99	71.938	Fukomys_damarensis
ENSLACG00000005557	CHD9	79	67.146	ENSFHEG00000006068	chd9	95	66.944	Fundulus_heteroclitus
ENSLACG00000005557	CHD9	67	70.533	ENSGMOG00000006040	chd9	81	70.946	Gadus_morhua
ENSLACG00000005557	CHD9	73	74.861	ENSGALG00000039178	CHD9	99	74.525	Gallus_gallus
ENSLACG00000005557	CHD9	79	66.625	ENSGAFG00000010014	chd9	95	66.296	Gambusia_affinis
ENSLACG00000005557	CHD9	79	64.916	ENSGACG00000016694	chd9	94	70.218	Gasterosteus_aculeatus
ENSLACG00000005557	CHD9	73	72.122	ENSGGOG00000014816	CHD9	98	73.264	Gorilla_gorilla
ENSLACG00000005557	CHD9	79	66.639	ENSHBUG00000023322	chd9	97	64.867	Haplochromis_burtoni
ENSLACG00000005557	CHD9	99	71.860	ENSHGLG00000014938	CHD9	99	77.791	Heterocephalus_glaber_female
ENSLACG00000005557	CHD9	97	57.815	ENSHCOG00000000937	chd9	95	65.048	Hippocampus_comes
ENSLACG00000005557	CHD9	81	65.078	ENSIPUG00000016448	chd9	95	66.457	Ictalurus_punctatus
ENSLACG00000005557	CHD9	73	71.766	ENSSTOG00000022273	CHD9	99	77.675	Ictidomys_tridecemlineatus
ENSLACG00000005557	CHD9	69	76.119	ENSJJAG00000015741	-	99	76.205	Jaculus_jaculus
ENSLACG00000005557	CHD9	84	66.653	ENSKMAG00000016784	chd9	97	65.859	Kryptolebias_marmoratus
ENSLACG00000005557	CHD9	88	62.238	ENSLBEG00000012077	chd9	95	66.215	Labrus_bergylta
ENSLACG00000005557	CHD9	87	68.917	ENSLOCG00000007225	chd9	99	70.277	Lepisosteus_oculatus
ENSLACG00000005557	CHD9	73	72.057	ENSLAFG00000015374	CHD9	99	71.830	Loxodonta_africana
ENSLACG00000005557	CHD9	80	75.745	ENSMFAG00000041354	CHD9	98	75.521	Macaca_fascicularis
ENSLACG00000005557	CHD9	73	72.076	ENSMMUG00000016310	CHD9	98	73.343	Macaca_mulatta
ENSLACG00000005557	CHD9	99	72.040	ENSMNEG00000031494	CHD9	100	72.130	Macaca_nemestrina
ENSLACG00000005557	CHD9	73	72.076	ENSMLEG00000043219	CHD9	98	73.490	Mandrillus_leucophaeus
ENSLACG00000005557	CHD9	88	66.158	ENSMAMG00000003909	chd9	97	59.257	Mastacembelus_armatus
ENSLACG00000005557	CHD9	79	66.792	ENSMZEG00005006581	chd9	97	65.212	Maylandia_zebra
ENSLACG00000005557	CHD9	95	69.825	ENSMGAG00000004642	CHD9	72	70.334	Meleagris_gallopavo
ENSLACG00000005557	CHD9	73	72.323	ENSMICG00000016679	CHD9	98	73.214	Microcebus_murinus
ENSLACG00000005557	CHD9	80	65.612	ENSMMOG00000016406	chd9	97	58.483	Mola_mola
ENSLACG00000005557	CHD9	73	71.322	ENSMODG00000013142	-	99	81.101	Monodelphis_domestica
ENSLACG00000005557	CHD9	79	66.079	ENSMALG00000013306	chd9	99	58.140	Monopterus_albus
ENSLACG00000005557	CHD9	99	69.860	MGP_CAROLIEiJ_G0031364	Chd9	99	70.120	Mus_caroli
ENSLACG00000005557	CHD9	99	69.457	ENSMUSG00000056608	Chd9	99	75.854	Mus_musculus
ENSLACG00000005557	CHD9	99	68.968	MGP_PahariEiJ_G0022964	Chd9	99	68.989	Mus_pahari
ENSLACG00000005557	CHD9	99	70.103	MGP_SPRETEiJ_G0032483	Chd9	99	70.260	Mus_spretus
ENSLACG00000005557	CHD9	73	72.879	ENSMPUG00000003285	CHD9	99	72.085	Mustela_putorius_furo
ENSLACG00000005557	CHD9	73	72.276	ENSMLUG00000004456	CHD9	99	71.801	Myotis_lucifugus
ENSLACG00000005557	CHD9	79	66.610	ENSNBRG00000009423	chd9	97	65.141	Neolamprologus_brichardi
ENSLACG00000005557	CHD9	73	72.215	ENSNLEG00000001026	CHD9	100	72.342	Nomascus_leucogenys
ENSLACG00000005557	CHD9	70	96.732	ENSMEUG00000008222	-	77	96.732	Notamacropus_eugenii
ENSLACG00000005557	CHD9	70	93.714	ENSOPRG00000011168	CHD9	83	93.714	Ochotona_princeps
ENSLACG00000005557	CHD9	99	71.605	ENSODEG00000004466	CHD9	99	71.889	Octodon_degus
ENSLACG00000005557	CHD9	80	67.251	ENSONIG00000002816	chd9	98	67.077	Oreochromis_niloticus
ENSLACG00000005557	CHD9	73	73.472	ENSOANG00000013401	CHD9	99	73.776	Ornithorhynchus_anatinus
ENSLACG00000005557	CHD9	57	77.557	ENSOCUG00000001016	CHD9	98	76.126	Oryctolagus_cuniculus
ENSLACG00000005557	CHD9	84	65.930	ENSORLG00000013810	chd9	98	63.575	Oryzias_latipes
ENSLACG00000005557	CHD9	77	66.623	ENSORLG00020020665	chd9	96	58.840	Oryzias_latipes_hni
ENSLACG00000005557	CHD9	84	65.445	ENSORLG00015019126	chd9	95	65.201	Oryzias_latipes_hsok
ENSLACG00000005557	CHD9	73	71.738	ENSOGAG00000002110	CHD9	99	72.070	Otolemur_garnettii
ENSLACG00000005557	CHD9	99	71.708	ENSOARG00000017664	CHD9	99	71.429	Ovis_aries
ENSLACG00000005557	CHD9	82	74.969	ENSPPAG00000039388	-	99	75.052	Pan_paniscus
ENSLACG00000005557	CHD9	73	72.462	ENSPPRG00000004801	CHD9	99	72.016	Panthera_pardus
ENSLACG00000005557	CHD9	96	72.131	ENSPTIG00000021854	CHD9	99	71.644	Panthera_tigris_altaica
ENSLACG00000005557	CHD9	73	72.122	ENSPTRG00000008113	CHD9	98	73.521	Pan_troglodytes
ENSLACG00000005557	CHD9	73	71.983	ENSPANG00000019307	CHD9	99	75.650	Papio_anubis
ENSLACG00000005557	CHD9	97	59.269	ENSPKIG00000021876	chd9	98	66.775	Paramormyrops_kingsleyae
ENSLACG00000005557	CHD9	96	57.276	ENSPKIG00000025401	-	72	59.242	Paramormyrops_kingsleyae
ENSLACG00000005557	CHD9	63	73.727	ENSPSIG00000008099	CHD9	98	73.990	Pelodiscus_sinensis
ENSLACG00000005557	CHD9	50	67.049	ENSPMAG00000006035	-	85	67.049	Petromyzon_marinus
ENSLACG00000005557	CHD9	89	72.700	ENSPCIG00000017215	CHD9	95	81.996	Phascolarctos_cinereus
ENSLACG00000005557	CHD9	79	66.263	ENSPFOG00000015839	chd9	99	57.755	Poecilia_formosa
ENSLACG00000005557	CHD9	79	67.170	ENSPLAG00000011118	chd9	98	65.452	Poecilia_latipinna
ENSLACG00000005557	CHD9	84	66.950	ENSPMEG00000015106	chd9	99	58.018	Poecilia_mexicana
ENSLACG00000005557	CHD9	84	67.148	ENSPREG00000006473	chd9	95	66.282	Poecilia_reticulata
ENSLACG00000005557	CHD9	73	72.091	ENSPPYG00000007348	CHD9	99	71.874	Pongo_abelii
ENSLACG00000005557	CHD9	73	80.808	ENSPCAG00000007564	CHD9	86	80.808	Procavia_capensis
ENSLACG00000005557	CHD9	96	72.090	ENSPCOG00000028433	CHD9	98	71.893	Propithecus_coquereli
ENSLACG00000005557	CHD9	84	72.321	ENSPVAG00000015617	CHD9	97	71.483	Pteropus_vampyrus
ENSLACG00000005557	CHD9	79	66.973	ENSPNYG00000010947	chd9	97	65.212	Pundamilia_nyererei
ENSLACG00000005557	CHD9	85	64.919	ENSPNAG00000024141	chd9	96	67.097	Pygocentrus_nattereri
ENSLACG00000005557	CHD9	90	68.564	ENSRNOG00000049302	Chd9	100	70.131	Rattus_norvegicus
ENSLACG00000005557	CHD9	69	74.814	ENSRBIG00000035553	CHD9	99	75.640	Rhinopithecus_bieti
ENSLACG00000005557	CHD9	82	75.803	ENSRROG00000033278	CHD9	99	75.740	Rhinopithecus_roxellana
ENSLACG00000005557	CHD9	99	72.003	ENSSBOG00000030240	CHD9	98	73.560	Saimiri_boliviensis_boliviensis
ENSLACG00000005557	CHD9	99	72.945	ENSSHAG00000002719	CHD9	99	73.263	Sarcophilus_harrisii
ENSLACG00000005557	CHD9	74	60.526	ENSSFOG00015020209	chd9	98	66.529	Scleropages_formosus
ENSLACG00000005557	CHD9	86	63.066	ENSSFOG00015001327	chd9	97	64.953	Scleropages_formosus
ENSLACG00000005557	CHD9	79	66.653	ENSSMAG00000008953	chd9	95	65.902	Scophthalmus_maximus
ENSLACG00000005557	CHD9	97	59.547	ENSSDUG00000006139	chd9	95	65.831	Seriola_dumerili
ENSLACG00000005557	CHD9	97	59.986	ENSSLDG00000017818	chd9	95	66.475	Seriola_lalandi_dorsalis
ENSLACG00000005557	CHD9	71	80.118	ENSSARG00000010632	CHD9	70	80.390	Sorex_araneus
ENSLACG00000005557	CHD9	83	67.155	ENSSPAG00000021649	chd9	98	65.100	Stegastes_partitus
ENSLACG00000005557	CHD9	73	74.182	ENSTGUG00000007476	CHD9	100	74.161	Taeniopygia_guttata
ENSLACG00000005557	CHD9	73	57.983	ENSTRUG00000009125	chd9	97	58.452	Takifugu_rubripes
ENSLACG00000005557	CHD9	55	82.439	ENSTNIG00000003825	chd9	83	82.439	Tetraodon_nigroviridis
ENSLACG00000005557	CHD9	66	69.333	ENSTBEG00000016052	-	80	71.041	Tupaia_belangeri
ENSLACG00000005557	CHD9	73	72.323	ENSTTRG00000012674	CHD9	90	71.391	Tursiops_truncatus
ENSLACG00000005557	CHD9	87	76.515	ENSUMAG00000004043	CHD9	98	88.060	Ursus_maritimus
ENSLACG00000005557	CHD9	71	78.834	ENSVPAG00000001374	CHD9	97	75.763	Vicugna_pacos
ENSLACG00000005557	CHD9	73	72.694	ENSVVUG00000019435	CHD9	99	72.335	Vulpes_vulpes
ENSLACG00000005557	CHD9	99	66.541	ENSXETG00000000349	chd9	96	68.455	Xenopus_tropicalis
ENSLACG00000005557	CHD9	79	67.131	ENSXCOG00000012997	chd9	95	66.324	Xiphophorus_couchianus
ENSLACG00000005557	CHD9	79	66.889	ENSXMAG00000016192	chd9	96	67.559	Xiphophorus_maculatus