EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005578 (Gene tree)
Gene ID: 102356803
Gene Symbol: DDX28
Alias: FLJ11282|MDDX28
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2400 bases
Position: chrJH128976.1:173777-176176
Accession: 102356803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006288	DEAD	PF00270.29	6.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006341	DDX28-201	2400	XM_006010647	ENSLACP00000006288	573 (aa)	XP_006010709	H3A9G7

Gene Model

Click here to download ENSLACG00000005578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005578	DDX28	63	37.705	ENSLACG00000010529	DDX1	54	37.705
ENSLACG00000005578	DDX28	68	30.025	ENSLACG00000000108	EIF4A3	89	30.025
ENSLACG00000005578	DDX28	67	30.548	ENSLACG00000013814	DDX47	83	30.542
ENSLACG00000005578	DDX28	61	31.429	ENSLACG00000000741	ddx43	68	31.429
ENSLACG00000005578	DDX28	63	30.811	ENSLACG00000012514	DDX52	56	30.811
ENSLACG00000005578	DDX28	62	32.213	ENSLACG00000015051	DDX5	65	31.742

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005578	DDX28	87	53.150	ENSG00000182810	DDX28	93	53.150	Homo_sapiens
ENSLACG00000005578	DDX28	95	54.417	ENSAPOG00000000991	ddx28	98	54.417	Acanthochromis_polyacanthus
ENSLACG00000005578	DDX28	87	54.150	ENSAMEG00000019426	DDX28	94	54.150	Ailuropoda_melanoleuca
ENSLACG00000005578	DDX28	87	59.252	ENSACIG00000021615	ddx28	90	59.252	Amphilophus_citrinellus
ENSLACG00000005578	DDX28	95	55.776	ENSAOCG00000004610	ddx28	97	55.776	Amphiprion_ocellaris
ENSLACG00000005578	DDX28	95	55.596	ENSAPEG00000002143	ddx28	97	55.596	Amphiprion_percula
ENSLACG00000005578	DDX28	89	57.060	ENSATEG00000018691	ddx28	91	57.060	Anabas_testudineus
ENSLACG00000005578	DDX28	87	50.787	ENSACAG00000009755	DDX28	93	50.787	Anolis_carolinensis
ENSLACG00000005578	DDX28	87	56.385	ENSACLG00000012984	ddx28	90	56.385	Astatotilapia_calliptera
ENSLACG00000005578	DDX28	88	56.489	ENSAMXG00000005878	ddx28	92	56.489	Astyanax_mexicanus
ENSLACG00000005578	DDX28	87	54.348	ENSBTAG00000004290	DDX28	92	54.348	Bos_taurus
ENSLACG00000005578	DDX28	85	53.831	ENSCAFG00000020327	DDX28	93	53.831	Canis_familiaris
ENSLACG00000005578	DDX28	85	53.831	ENSCAFG00020019785	DDX28	93	53.831	Canis_lupus_dingo
ENSLACG00000005578	DDX28	87	54.348	ENSCHIG00000009658	DDX28	92	54.348	Capra_hircus
ENSLACG00000005578	DDX28	88	54.369	ENSCPOG00000013746	DDX28	95	54.369	Cavia_porcellus
ENSLACG00000005578	DDX28	87	54.134	ENSCSAG00000018472	DDX28	92	54.134	Chlorocebus_sabaeus
ENSLACG00000005578	DDX28	81	56.410	ENSCPBG00000012105	DDX28	81	59.753	Chrysemys_picta_bellii
ENSLACG00000005578	DDX28	63	37.534	ENSCSAVG00000006341	-	94	37.534	Ciona_savignyi
ENSLACG00000005578	DDX28	84	53.878	ENSCGRG00001024412	Ddx28	93	54.268	Cricetulus_griseus_chok1gshd
ENSLACG00000005578	DDX28	88	56.078	ENSCSEG00000011651	ddx28	89	56.078	Cynoglossus_semilaevis
ENSLACG00000005578	DDX28	88	57.059	ENSCVAG00000004044	ddx28	91	57.059	Cyprinodon_variegatus
ENSLACG00000005578	DDX28	88	57.476	ENSDARG00000060411	ddx28	91	57.476	Danio_rerio
ENSLACG00000005578	DDX28	63	58.904	ENSDNOG00000033593	DDX28	99	58.904	Dasypus_novemcinctus
ENSLACG00000005578	DDX28	82	54.697	ENSDORG00000028868	Ddx28	94	53.333	Dipodomys_ordii
ENSLACG00000005578	DDX28	81	37.687	FBgn0086130	Dbp21E2	86	37.740	Drosophila_melanogaster
ENSLACG00000005578	DDX28	87	55.010	ENSETEG00000001062	-	93	55.010	Echinops_telfairi
ENSLACG00000005578	DDX28	70	43.915	ENSEBUG00000004791	ddx28	79	42.788	Eptatretus_burgeri
ENSLACG00000005578	DDX28	87	54.545	ENSEASG00005020387	DDX28	93	54.545	Equus_asinus_asinus
ENSLACG00000005578	DDX28	87	54.743	ENSECAG00000006451	DDX28	93	54.743	Equus_caballus
ENSLACG00000005578	DDX28	68	48.750	ENSEEUG00000005017	DDX28	93	48.750	Erinaceus_europaeus
ENSLACG00000005578	DDX28	88	58.767	ENSELUG00000005302	ddx28	96	59.528	Esox_lucius
ENSLACG00000005578	DDX28	87	54.150	ENSFCAG00000012858	DDX28	93	54.150	Felis_catus
ENSLACG00000005578	DDX28	87	58.084	ENSFHEG00000012573	ddx28	90	58.084	Fundulus_heteroclitus
ENSLACG00000005578	DDX28	87	55.469	ENSGMOG00000017045	ddx28	95	55.469	Gadus_morhua
ENSLACG00000005578	DDX28	88	48.184	ENSGALG00000048700	DDX28	89	48.184	Gallus_gallus
ENSLACG00000005578	DDX28	87	56.773	ENSGAFG00000009249	ddx28	89	56.773	Gambusia_affinis
ENSLACG00000005578	DDX28	88	57.451	ENSGACG00000016367	ddx28	94	57.451	Gasterosteus_aculeatus
ENSLACG00000005578	DDX28	74	55.504	ENSGAGG00000004565	DDX28	93	55.504	Gopherus_agassizii
ENSLACG00000005578	DDX28	87	53.150	ENSGGOG00000001220	DDX28	93	53.150	Gorilla_gorilla
ENSLACG00000005578	DDX28	87	59.332	ENSHBUG00000001016	ddx28	90	59.332	Haplochromis_burtoni
ENSLACG00000005578	DDX28	87	56.016	ENSHCOG00000017590	ddx28	91	56.016	Hippocampus_comes
ENSLACG00000005578	DDX28	87	57.228	ENSIPUG00000017350	Ddx28	89	57.228	Ictalurus_punctatus
ENSLACG00000005578	DDX28	87	54.134	ENSSTOG00000002064	DDX28	94	54.134	Ictidomys_tridecemlineatus
ENSLACG00000005578	DDX28	87	54.706	ENSJJAG00000012460	-	93	54.706	Jaculus_jaculus
ENSLACG00000005578	DDX28	89	55.706	ENSKMAG00000018183	ddx28	91	55.706	Kryptolebias_marmoratus
ENSLACG00000005578	DDX28	89	57.060	ENSLBEG00000006072	ddx28	91	57.060	Labrus_bergylta
ENSLACG00000005578	DDX28	87	60.433	ENSLOCG00000017604	ddx28	91	60.433	Lepisosteus_oculatus
ENSLACG00000005578	DDX28	87	54.832	ENSLAFG00000031239	DDX28	93	54.832	Loxodonta_africana
ENSLACG00000005578	DDX28	87	53.937	ENSMMUG00000010836	DDX28	92	53.937	Macaca_mulatta
ENSLACG00000005578	DDX28	87	58.153	ENSMAMG00000020220	ddx28	90	58.153	Mastacembelus_armatus
ENSLACG00000005578	DDX28	87	59.921	ENSMZEG00005009292	ddx28	90	59.921	Maylandia_zebra
ENSLACG00000005578	DDX28	87	43.307	ENSMICG00000012346	-	92	43.307	Microcebus_murinus
ENSLACG00000005578	DDX28	82	56.394	ENSMOCG00000009815	Ddx28	93	55.336	Microtus_ochrogaster
ENSLACG00000005578	DDX28	88	57.588	ENSMMOG00000000270	ddx28	92	57.588	Mola_mola
ENSLACG00000005578	DDX28	87	56.102	ENSMODG00000005303	DDX28	92	56.102	Monodelphis_domestica
ENSLACG00000005578	DDX28	88	58.560	ENSMALG00000008864	ddx28	90	58.560	Monopterus_albus
ENSLACG00000005578	DDX28	88	53.996	MGP_CAROLIEiJ_G0031510	Ddx28	95	53.996	Mus_caroli
ENSLACG00000005578	DDX28	88	54.776	ENSMUSG00000045538	Ddx28	95	54.776	Mus_musculus
ENSLACG00000005578	DDX28	88	54.369	MGP_PahariEiJ_G0023110	Ddx28	95	54.369	Mus_pahari
ENSLACG00000005578	DDX28	88	54.776	MGP_SPRETEiJ_G0032628	Ddx28	95	54.776	Mus_spretus
ENSLACG00000005578	DDX28	69	54.135	ENSMPUG00000006915	DDX28	99	54.135	Mustela_putorius_furo
ENSLACG00000005578	DDX28	86	54.291	ENSMLUG00000005899	DDX28	92	54.291	Myotis_lucifugus
ENSLACG00000005578	DDX28	87	54.795	ENSNGAG00000015762	Ddx28	94	54.795	Nannospalax_galili
ENSLACG00000005578	DDX28	87	59.369	ENSNBRG00000001337	ddx28	91	59.369	Neolamprologus_brichardi
ENSLACG00000005578	DDX28	87	59.608	ENSONIG00000020597	ddx28	91	59.608	Oreochromis_niloticus
ENSLACG00000005578	DDX28	87	54.724	ENSOCUG00000023074	DDX28	93	54.921	Oryctolagus_cuniculus
ENSLACG00000005578	DDX28	90	54.876	ENSORLG00000011968	ddx28	94	54.876	Oryzias_latipes
ENSLACG00000005578	DDX28	88	55.728	ENSORLG00020001951	ddx28	93	55.728	Oryzias_latipes_hni
ENSLACG00000005578	DDX28	88	55.534	ENSORLG00015023030	ddx28	93	55.534	Oryzias_latipes_hsok
ENSLACG00000005578	DDX28	94	54.909	ENSOMEG00000012445	ddx28	97	54.909	Oryzias_melastigma
ENSLACG00000005578	DDX28	87	55.469	ENSOGAG00000016895	DDX28	93	55.469	Otolemur_garnettii
ENSLACG00000005578	DDX28	76	52.703	ENSOARG00000003313	DDX28	99	52.703	Ovis_aries
ENSLACG00000005578	DDX28	87	50.984	ENSPPAG00000036971	DDX28	93	50.984	Pan_paniscus
ENSLACG00000005578	DDX28	87	54.545	ENSPPRG00000018322	DDX28	93	54.545	Panthera_pardus
ENSLACG00000005578	DDX28	87	52.767	ENSPTIG00000006444	DDX28	93	52.767	Panthera_tigris_altaica
ENSLACG00000005578	DDX28	87	53.543	ENSPTRG00000008258	DDX28	93	53.543	Pan_troglodytes
ENSLACG00000005578	DDX28	87	57.283	ENSPKIG00000021200	ddx28	93	57.283	Paramormyrops_kingsleyae
ENSLACG00000005578	DDX28	51	61.824	ENSPSIG00000001127	DDX28	98	61.824	Pelodiscus_sinensis
ENSLACG00000005578	DDX28	88	54.563	ENSPMGG00000007908	ddx28	89	54.563	Periophthalmus_magnuspinnatus
ENSLACG00000005578	DDX28	87	54.331	ENSPEMG00000003395	Ddx28	93	54.331	Peromyscus_maniculatus_bairdii
ENSLACG00000005578	DDX28	51	48.822	ENSPMAG00000006983	DDX28	99	48.822	Petromyzon_marinus
ENSLACG00000005578	DDX28	88	56.863	ENSPFOG00000020952	ddx28	89	56.863	Poecilia_formosa
ENSLACG00000005578	DDX28	88	56.863	ENSPFOG00000020838	DDX28	90	56.863	Poecilia_formosa
ENSLACG00000005578	DDX28	88	56.667	ENSPLAG00000016292	ddx28	89	56.667	Poecilia_latipinna
ENSLACG00000005578	DDX28	88	56.863	ENSPMEG00000011311	ddx28	88	56.863	Poecilia_mexicana
ENSLACG00000005578	DDX28	88	56.556	ENSPREG00000002899	ddx28	89	56.556	Poecilia_reticulata
ENSLACG00000005578	DDX28	87	53.346	ENSPPYG00000007481	DDX28	94	53.346	Pongo_abelii
ENSLACG00000005578	DDX28	87	53.831	ENSPCOG00000024632	DDX28	93	53.831	Propithecus_coquereli
ENSLACG00000005578	DDX28	87	59.528	ENSPNYG00000018804	ddx28	90	59.528	Pundamilia_nyererei
ENSLACG00000005578	DDX28	88	57.253	ENSPNAG00000014597	ddx28	96	57.253	Pygocentrus_nattereri
ENSLACG00000005578	DDX28	89	53.578	ENSRNOG00000019817	Ddx28	95	53.578	Rattus_norvegicus
ENSLACG00000005578	DDX28	88	56.977	ENSSFOG00015010181	ddx28	93	56.977	Scleropages_formosus
ENSLACG00000005578	DDX28	88	55.728	ENSSMAG00000006831	ddx28	96	55.728	Scophthalmus_maximus
ENSLACG00000005578	DDX28	93	55.249	ENSSDUG00000003257	ddx28	95	55.249	Seriola_dumerili
ENSLACG00000005578	DDX28	93	54.815	ENSSLDG00000004513	ddx28	95	54.815	Seriola_lalandi_dorsalis
ENSLACG00000005578	DDX28	88	53.981	ENSSARG00000014169	DDX28	95	54.386	Sorex_araneus
ENSLACG00000005578	DDX28	97	55.694	ENSSPAG00000000988	ddx28	96	55.694	Stegastes_partitus
ENSLACG00000005578	DDX28	87	53.635	ENSSSCG00000026038	DDX28	93	53.635	Sus_scrofa
ENSLACG00000005578	DDX28	87	57.654	ENSTRUG00000007815	ddx28	92	57.654	Takifugu_rubripes
ENSLACG00000005578	DDX28	87	56.088	ENSTNIG00000011352	ddx28	99	56.088	Tetraodon_nigroviridis
ENSLACG00000005578	DDX28	74	63.889	ENSTBEG00000017695	DDX28	79	63.889	Tupaia_belangeri
ENSLACG00000005578	DDX28	87	53.953	ENSUAMG00000016116	DDX28	93	53.953	Ursus_americanus
ENSLACG00000005578	DDX28	75	55.402	ENSUMAG00000019200	DDX28	89	55.402	Ursus_maritimus
ENSLACG00000005578	DDX28	70	49.507	ENSVVUG00000012876	DDX28	80	49.507	Vulpes_vulpes
ENSLACG00000005578	DDX28	85	51.125	ENSXETG00000005435	ddx28	96	51.125	Xenopus_tropicalis
ENSLACG00000005578	DDX28	88	57.059	ENSXCOG00000012364	ddx28	90	57.059	Xiphophorus_couchianus
ENSLACG00000005578	DDX28	87	57.199	ENSXMAG00000019603	ddx28	91	57.199	Xiphophorus_maculatus