EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000005720 (Gene tree)
Gene ID: 102365524
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 28978 bases
Position: chrJH128208.1:181485-210462
Accession: 102365524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006447	RRM_1	PF00076.22	7.3e-16	1	2
ENSLACP00000006447	RRM_1	PF00076.22	7.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006500	RNPC3-201	1701	XM_006007908	ENSLACP00000006447	538 (aa)	XP_006007970	H3A9X6

Gene Model

Click here to download ENSLACG00000005720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005720	RNPC3	89	63.450	ENSG00000185946	RNPC3	99	56.684	Homo_sapiens
ENSLACG00000005720	RNPC3	90	58.824	ENSAPOG00000017371	rnpc3	99	60.119	Acanthochromis_polyacanthus
ENSLACG00000005720	RNPC3	90	62.424	ENSAMEG00000001694	RNPC3	94	61.818	Ailuropoda_melanoleuca
ENSLACG00000005720	RNPC3	91	53.922	ENSACIG00000021043	rnpc3	99	56.275	Amphilophus_citrinellus
ENSLACG00000005720	RNPC3	92	56.863	ENSAOCG00000014052	rnpc3	97	59.020	Amphiprion_ocellaris
ENSLACG00000005720	RNPC3	92	56.667	ENSAPEG00000008739	rnpc3	97	58.824	Amphiprion_percula
ENSLACG00000005720	RNPC3	92	55.728	ENSATEG00000021263	rnpc3	99	58.333	Anabas_testudineus
ENSLACG00000005720	RNPC3	83	64.238	ENSAPLG00000015605	RNPC3	100	66.813	Anas_platyrhynchos
ENSLACG00000005720	RNPC3	92	64.271	ENSACAG00000002029	RNPC3	99	63.953	Anolis_carolinensis
ENSLACG00000005720	RNPC3	89	63.169	ENSANAG00000019950	RNPC3	93	62.551	Aotus_nancymaae
ENSLACG00000005720	RNPC3	92	55.952	ENSACLG00000014702	rnpc3	99	58.135	Astatotilapia_calliptera
ENSLACG00000005720	RNPC3	93	57.760	ENSAMXG00000033372	rnpc3	99	57.647	Astyanax_mexicanus
ENSLACG00000005720	RNPC3	90	63.692	ENSBTAG00000019091	RNPC3	97	62.103	Bos_taurus
ENSLACG00000005720	RNPC3	89	63.299	ENSCJAG00000035686	RNPC3	93	62.963	Callithrix_jacchus
ENSLACG00000005720	RNPC3	90	62.551	ENSCAFG00000019972	RNPC3	94	61.943	Canis_familiaris
ENSLACG00000005720	RNPC3	90	62.753	ENSCAFG00020011300	RNPC3	94	62.146	Canis_lupus_dingo
ENSLACG00000005720	RNPC3	90	61.400	ENSCHIG00000020361	RNPC3	95	61.847	Capra_hircus
ENSLACG00000005720	RNPC3	90	61.972	ENSTSYG00000030256	RNPC3	95	61.368	Carlito_syrichta
ENSLACG00000005720	RNPC3	79	56.250	ENSCAPG00000013600	RNPC3	97	55.093	Cavia_aperea
ENSLACG00000005720	RNPC3	90	62.677	ENSCPOG00000031638	RNPC3	95	62.069	Cavia_porcellus
ENSLACG00000005720	RNPC3	89	63.580	ENSCCAG00000024301	RNPC3	93	62.963	Cebus_capucinus
ENSLACG00000005720	RNPC3	89	63.320	ENSCATG00000002086	RNPC3	95	61.694	Cercocebus_atys
ENSLACG00000005720	RNPC3	90	61.633	ENSCLAG00000005169	RNPC3	95	61.224	Chinchilla_lanigera
ENSLACG00000005720	RNPC3	89	63.115	ENSCSAG00000001519	RNPC3	95	61.492	Chlorocebus_sabaeus
ENSLACG00000005720	RNPC3	91	63.636	ENSCPBG00000028311	RNPC3	95	65.859	Chrysemys_picta_bellii
ENSLACG00000005720	RNPC3	89	38.160	ENSCING00000021276	-	99	37.897	Ciona_intestinalis
ENSLACG00000005720	RNPC3	89	63.320	ENSCANG00000031444	RNPC3	95	61.694	Colobus_angolensis_palliatus
ENSLACG00000005720	RNPC3	90	62.677	ENSCGRG00001019276	Rnpc3	95	62.602	Cricetulus_griseus_chok1gshd
ENSLACG00000005720	RNPC3	83	61.758	ENSCGRG00000000053	Rnpc3	99	61.674	Cricetulus_griseus_crigri
ENSLACG00000005720	RNPC3	91	57.000	ENSCSEG00000013475	rnpc3	98	57.000	Cynoglossus_semilaevis
ENSLACG00000005720	RNPC3	90	57.738	ENSCVAG00000002645	rnpc3	97	57.937	Cyprinodon_variegatus
ENSLACG00000005720	RNPC3	93	59.766	ENSDARG00000011247	rnpc3	99	59.766	Danio_rerio
ENSLACG00000005720	RNPC3	90	61.569	ENSDNOG00000047498	-	95	60.966	Dasypus_novemcinctus
ENSLACG00000005720	RNPC3	90	61.771	ENSDNOG00000044555	-	95	61.167	Dasypus_novemcinctus
ENSLACG00000005720	RNPC3	90	62.195	ENSDORG00000027343	Rnpc3	95	61.992	Dipodomys_ordii
ENSLACG00000005720	RNPC3	92	48.851	ENSEBUG00000002068	rnpc3	98	48.276	Eptatretus_burgeri
ENSLACG00000005720	RNPC3	90	63.821	ENSEASG00005015957	RNPC3	94	63.211	Equus_asinus_asinus
ENSLACG00000005720	RNPC3	90	63.821	ENSECAG00000021148	RNPC3	94	63.211	Equus_caballus
ENSLACG00000005720	RNPC3	92	58.429	ENSELUG00000002264	rnpc3	98	57.280	Esox_lucius
ENSLACG00000005720	RNPC3	90	62.575	ENSFCAG00000024312	RNPC3	94	62.195	Felis_catus
ENSLACG00000005720	RNPC3	83	65.121	ENSFALG00000002580	RNPC3	100	67.757	Ficedula_albicollis
ENSLACG00000005720	RNPC3	90	64.300	ENSFDAG00000019948	RNPC3	95	63.692	Fukomys_damarensis
ENSLACG00000005720	RNPC3	90	50.781	ENSFHEG00000020647	rnpc3	97	53.465	Fundulus_heteroclitus
ENSLACG00000005720	RNPC3	92	57.480	ENSGMOG00000019213	rnpc3	99	56.496	Gadus_morhua
ENSLACG00000005720	RNPC3	91	65.731	ENSGALG00000005162	RNPC3	90	65.731	Gallus_gallus
ENSLACG00000005720	RNPC3	92	53.216	ENSGAFG00000017236	rnpc3	99	55.186	Gambusia_affinis
ENSLACG00000005720	RNPC3	92	56.016	ENSGACG00000002048	rnpc3	99	56.178	Gasterosteus_aculeatus
ENSLACG00000005720	RNPC3	91	63.838	ENSGAGG00000008438	RNPC3	95	65.455	Gopherus_agassizii
ENSLACG00000005720	RNPC3	93	53.937	ENSGGOG00000026201	-	96	53.755	Gorilla_gorilla
ENSLACG00000005720	RNPC3	76	62.500	ENSHBUG00000015966	rnpc3	85	62.500	Haplochromis_burtoni
ENSLACG00000005720	RNPC3	90	63.838	ENSHGLG00000001708	RNPC3	95	63.232	Heterocephalus_glaber_female
ENSLACG00000005720	RNPC3	90	63.838	ENSHGLG00100003005	RNPC3	95	63.232	Heterocephalus_glaber_male
ENSLACG00000005720	RNPC3	90	57.287	ENSHCOG00000017135	rnpc3	97	59.312	Hippocampus_comes
ENSLACG00000005720	RNPC3	93	56.778	ENSIPUG00000002916	rnpc3	98	58.020	Ictalurus_punctatus
ENSLACG00000005720	RNPC3	90	63.083	ENSSTOG00000025020	RNPC3	95	62.475	Ictidomys_tridecemlineatus
ENSLACG00000005720	RNPC3	90	61.460	ENSJJAG00000010203	Rnpc3	95	60.852	Jaculus_jaculus
ENSLACG00000005720	RNPC3	92	56.548	ENSKMAG00000017358	rnpc3	99	56.746	Kryptolebias_marmoratus
ENSLACG00000005720	RNPC3	92	55.273	ENSLBEG00000024901	rnpc3	97	58.090	Labrus_bergylta
ENSLACG00000005720	RNPC3	92	65.538	ENSLOCG00000007986	rnpc3	98	65.070	Lepisosteus_oculatus
ENSLACG00000005720	RNPC3	90	59.432	ENSLAFG00000032342	RNPC3	97	60.277	Loxodonta_africana
ENSLACG00000005720	RNPC3	89	49.076	ENSMFAG00000002917	-	53	59.574	Macaca_fascicularis
ENSLACG00000005720	RNPC3	89	63.115	ENSMFAG00000002004	RNPC3	95	61.492	Macaca_fascicularis
ENSLACG00000005720	RNPC3	89	62.910	ENSMMUG00000018039	RNPC3	95	61.290	Macaca_mulatta
ENSLACG00000005720	RNPC3	73	64.039	ENSMMUG00000002098	-	84	63.054	Macaca_mulatta
ENSLACG00000005720	RNPC3	89	59.016	ENSMNEG00000033950	RNPC3	95	57.460	Macaca_nemestrina
ENSLACG00000005720	RNPC3	89	63.320	ENSMLEG00000033628	RNPC3	95	61.694	Mandrillus_leucophaeus
ENSLACG00000005720	RNPC3	89	48.975	ENSMLEG00000034644	-	93	48.466	Mandrillus_leucophaeus
ENSLACG00000005720	RNPC3	91	55.166	ENSMAMG00000007496	rnpc3	98	53.728	Mastacembelus_armatus
ENSLACG00000005720	RNPC3	94	54.064	ENSMZEG00005020233	rnpc3	99	57.171	Maylandia_zebra
ENSLACG00000005720	RNPC3	83	65.359	ENSMGAG00000006381	RNPC3	100	66.231	Meleagris_gallopavo
ENSLACG00000005720	RNPC3	90	63.286	ENSMAUG00000001358	Rnpc3	95	63.211	Mesocricetus_auratus
ENSLACG00000005720	RNPC3	90	63.083	ENSMICG00000029591	RNPC3	95	62.475	Microcebus_murinus
ENSLACG00000005720	RNPC3	90	62.398	ENSMOCG00000013423	Rnpc3	94	62.322	Microtus_ochrogaster
ENSLACG00000005720	RNPC3	92	54.291	ENSMMOG00000005309	rnpc3	99	51.896	Mola_mola
ENSLACG00000005720	RNPC3	90	61.992	ENSMODG00000002946	RNPC3	95	63.618	Monodelphis_domestica
ENSLACG00000005720	RNPC3	91	53.831	ENSMALG00000015471	rnpc3	99	55.992	Monopterus_albus
ENSLACG00000005720	RNPC3	90	62.272	MGP_CAROLIEiJ_G0025555	Rnpc3	96	62.525	Mus_caroli
ENSLACG00000005720	RNPC3	90	62.677	ENSMUSG00000027981	Rnpc3	99	62.500	Mus_musculus
ENSLACG00000005720	RNPC3	90	61.866	MGP_PahariEiJ_G0027001	Rnpc3	96	62.118	Mus_pahari
ENSLACG00000005720	RNPC3	90	63.083	MGP_SPRETEiJ_G0026505	Rnpc3	96	62.933	Mus_spretus
ENSLACG00000005720	RNPC3	90	63.083	ENSMPUG00000007349	RNPC3	94	62.475	Mustela_putorius_furo
ENSLACG00000005720	RNPC3	89	63.951	ENSMLUG00000028743	RNPC3	94	64.213	Myotis_lucifugus
ENSLACG00000005720	RNPC3	90	62.828	ENSNGAG00000010939	Rnpc3	95	62.272	Nannospalax_galili
ENSLACG00000005720	RNPC3	92	55.952	ENSNBRG00000012196	rnpc3	96	58.135	Neolamprologus_brichardi
ENSLACG00000005720	RNPC3	89	63.244	ENSNLEG00000012013	RNPC3	93	62.423	Nomascus_leucogenys
ENSLACG00000005720	RNPC3	90	62.374	ENSODEG00000007612	RNPC3	95	61.972	Octodon_degus
ENSLACG00000005720	RNPC3	92	56.250	ENSONIG00000004770	rnpc3	100	59.919	Oreochromis_niloticus
ENSLACG00000005720	RNPC3	86	64.392	ENSOANG00000008220	RNPC3	100	64.179	Ornithorhynchus_anatinus
ENSLACG00000005720	RNPC3	90	61.895	ENSOCUG00000004016	RNPC3	95	61.446	Oryctolagus_cuniculus
ENSLACG00000005720	RNPC3	90	57.980	ENSORLG00000005694	rnpc3	99	57.228	Oryzias_latipes
ENSLACG00000005720	RNPC3	90	58.384	ENSORLG00020005513	rnpc3	99	57.738	Oryzias_latipes_hni
ENSLACG00000005720	RNPC3	90	58.182	ENSORLG00015002179	rnpc3	99	57.540	Oryzias_latipes_hsok
ENSLACG00000005720	RNPC3	90	58.656	ENSOMEG00000017737	rnpc3	97	58.656	Oryzias_melastigma
ENSLACG00000005720	RNPC3	90	62.677	ENSOGAG00000026182	RNPC3	95	62.118	Otolemur_garnettii
ENSLACG00000005720	RNPC3	90	61.400	ENSOARG00000018719	RNPC3	95	61.847	Ovis_aries
ENSLACG00000005720	RNPC3	89	63.190	ENSPPAG00000037459	RNPC3	93	62.372	Pan_paniscus
ENSLACG00000005720	RNPC3	93	54.150	ENSPPAG00000030278	-	96	53.953	Pan_paniscus
ENSLACG00000005720	RNPC3	90	62.575	ENSPPRG00000020246	RNPC3	94	61.866	Panthera_pardus
ENSLACG00000005720	RNPC3	90	62.575	ENSPTIG00000009887	RNPC3	96	61.866	Panthera_tigris_altaica
ENSLACG00000005720	RNPC3	89	63.115	ENSPTRG00000033902	RNPC3	93	62.295	Pan_troglodytes
ENSLACG00000005720	RNPC3	88	55.042	ENSPTRG00000044227	-	93	55.882	Pan_troglodytes
ENSLACG00000005720	RNPC3	89	53.086	ENSPANG00000029957	-	50	59.149	Papio_anubis
ENSLACG00000005720	RNPC3	89	63.450	ENSPANG00000012137	RNPC3	95	61.818	Papio_anubis
ENSLACG00000005720	RNPC3	93	61.868	ENSPKIG00000008828	rnpc3	99	62.062	Paramormyrops_kingsleyae
ENSLACG00000005720	RNPC3	59	65.653	ENSPSIG00000007396	RNPC3	100	65.957	Pelodiscus_sinensis
ENSLACG00000005720	RNPC3	88	53.550	ENSPMGG00000011742	rnpc3	95	52.738	Periophthalmus_magnuspinnatus
ENSLACG00000005720	RNPC3	83	61.758	ENSPEMG00000020112	Rnpc3	99	61.894	Peromyscus_maniculatus_bairdii
ENSLACG00000005720	RNPC3	90	46.004	ENSPMAG00000003778	rnpc3	96	44.466	Petromyzon_marinus
ENSLACG00000005720	RNPC3	90	64.228	ENSPCIG00000004415	-	95	63.618	Phascolarctos_cinereus
ENSLACG00000005720	RNPC3	92	54.403	ENSPFOG00000009895	rnpc3	99	56.890	Poecilia_formosa
ENSLACG00000005720	RNPC3	92	54.457	ENSPLAG00000012023	rnpc3	99	56.809	Poecilia_latipinna
ENSLACG00000005720	RNPC3	92	54.599	ENSPMEG00000003663	rnpc3	99	57.087	Poecilia_mexicana
ENSLACG00000005720	RNPC3	90	54.851	ENSPREG00000010206	rnpc3	97	57.430	Poecilia_reticulata
ENSLACG00000005720	RNPC3	75	56.901	ENSPPYG00000001102	RNPC3	93	55.932	Pongo_abelii
ENSLACG00000005720	RNPC3	92	55.754	ENSPNYG00000020603	rnpc3	99	57.937	Pundamilia_nyererei
ENSLACG00000005720	RNPC3	90	62.398	ENSRNOG00000017310	Rnpc3	95	62.602	Rattus_norvegicus
ENSLACG00000005720	RNPC3	89	58.282	ENSRBIG00000043897	RNPC3	95	56.740	Rhinopithecus_bieti
ENSLACG00000005720	RNPC3	89	63.320	ENSRROG00000032334	RNPC3	95	61.694	Rhinopithecus_roxellana
ENSLACG00000005720	RNPC3	89	64.330	ENSSBOG00000024473	RNPC3	94	63.711	Saimiri_boliviensis_boliviensis
ENSLACG00000005720	RNPC3	90	62.020	ENSSHAG00000011859	RNPC3	95	62.626	Sarcophilus_harrisii
ENSLACG00000005720	RNPC3	93	63.035	ENSSFOG00015013055	rnpc3	99	65.244	Scleropages_formosus
ENSLACG00000005720	RNPC3	92	57.198	ENSSMAG00000020346	rnpc3	99	54.280	Scophthalmus_maximus
ENSLACG00000005720	RNPC3	92	56.615	ENSSDUG00000006600	rnpc3	99	58.560	Seriola_dumerili
ENSLACG00000005720	RNPC3	92	56.809	ENSSLDG00000007979	rnpc3	99	58.560	Seriola_lalandi_dorsalis
ENSLACG00000005720	RNPC3	90	62.857	ENSSPUG00000003872	-	92	62.857	Sphenodon_punctatus
ENSLACG00000005720	RNPC3	91	63.968	ENSSPUG00000008539	-	95	66.068	Sphenodon_punctatus
ENSLACG00000005720	RNPC3	90	59.674	ENSSPAG00000005633	rnpc3	97	59.674	Stegastes_partitus
ENSLACG00000005720	RNPC3	90	62.450	ENSSSCG00000037254	RNPC3	95	62.097	Sus_scrofa
ENSLACG00000005720	RNPC3	83	65.419	ENSTGUG00000004795	-	100	67.257	Taeniopygia_guttata
ENSLACG00000005720	RNPC3	90	59.519	ENSTNIG00000018963	rnpc3	99	58.416	Tetraodon_nigroviridis
ENSLACG00000005720	RNPC3	90	62.753	ENSUMAG00000007775	RNPC3	96	62.146	Ursus_maritimus
ENSLACG00000005720	RNPC3	90	62.753	ENSVVUG00000000331	RNPC3	94	62.146	Vulpes_vulpes
ENSLACG00000005720	RNPC3	91	50.391	ENSXETG00000025027	rnpc3	97	47.500	Xenopus_tropicalis
ENSLACG00000005720	RNPC3	92	55.906	ENSXCOG00000005013	rnpc3	99	51.607	Xiphophorus_couchianus
ENSLACG00000005720	RNPC3	92	53.606	ENSXMAG00000006495	rnpc3	99	55.382	Xiphophorus_maculatus