EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000005731 (Gene tree)
Gene ID: 102357897
Gene Symbol: NMD3
Alias: CGI-07
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 32320 bases
Position: chrJH127319.1:182072-214391
Accession: 102357897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006460	NMD3	PF04981.13	4.2e-81	1	1
ENSLACP00000006459	NMD3	PF04981.13	5e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006512	NMD3-201	1461	-	ENSLACP00000006459	487 (aa)	-	H3A9Y8
ENSLACT00000006513	NMD3-202	1899	XM_006002046	ENSLACP00000006460	441 (aa)	XP_006002109	H3A9Y9

Gene Model

Click here to download ENSLACG00000005731's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG
lcm03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005731	NMD3	99	78.261	ENSG00000169251	NMD3	100	80.275	Homo_sapiens
ENSLACG00000005731	NMD3	99	82.609	ENSAPOG00000022912	nmd3	99	78.758	Acanthochromis_polyacanthus
ENSLACG00000005731	NMD3	99	78.082	ENSAMEG00000001584	NMD3	99	74.950	Ailuropoda_melanoleuca
ENSLACG00000005731	NMD3	99	75.973	ENSACIG00000015196	nmd3	99	73.146	Amphilophus_citrinellus
ENSLACG00000005731	NMD3	99	83.066	ENSAOCG00000009086	nmd3	99	79.359	Amphiprion_ocellaris
ENSLACG00000005731	NMD3	99	82.838	ENSAPEG00000000329	nmd3	99	79.158	Amphiprion_percula
ENSLACG00000005731	NMD3	99	82.380	ENSATEG00000014351	nmd3	99	78.958	Anabas_testudineus
ENSLACG00000005731	NMD3	99	78.947	ENSAPLG00000014786	NMD3	99	76.104	Anas_platyrhynchos
ENSLACG00000005731	NMD3	99	83.524	ENSACAG00000007349	NMD3	99	79.920	Anolis_carolinensis
ENSLACG00000005731	NMD3	99	78.719	ENSANAG00000026434	NMD3	99	75.502	Aotus_nancymaae
ENSLACG00000005731	NMD3	99	81.922	ENSACLG00000015520	nmd3	99	78.156	Astatotilapia_calliptera
ENSLACG00000005731	NMD3	99	80.320	ENSAMXG00000014415	nmd3	99	76.954	Astyanax_mexicanus
ENSLACG00000005731	NMD3	99	77.117	ENSBTAG00000016228	NMD3	99	74.498	Bos_taurus
ENSLACG00000005731	NMD3	95	53.461	WBGene00012030	T25G3.3	95	49.281	Caenorhabditis_elegans
ENSLACG00000005731	NMD3	99	79.405	ENSCJAG00000002900	NMD3	97	76.459	Callithrix_jacchus
ENSLACG00000005731	NMD3	99	78.032	ENSCAFG00000014352	NMD3	97	75.252	Canis_familiaris
ENSLACG00000005731	NMD3	99	77.803	ENSCAFG00020021145	NMD3	99	75.100	Canis_lupus_dingo
ENSLACG00000005731	NMD3	99	77.346	ENSCHIG00000016015	NMD3	99	74.498	Capra_hircus
ENSLACG00000005731	NMD3	99	78.719	ENSTSYG00000002155	NMD3	99	75.502	Carlito_syrichta
ENSLACG00000005731	NMD3	91	78.000	ENSCAPG00000017861	NMD3	93	78.000	Cavia_aperea
ENSLACG00000005731	NMD3	99	78.261	ENSCPOG00000005953	NMD3	94	78.261	Cavia_porcellus
ENSLACG00000005731	NMD3	99	78.947	ENSCCAG00000037460	NMD3	99	75.904	Cebus_capucinus
ENSLACG00000005731	NMD3	99	78.947	ENSCATG00000030022	NMD3	99	76.104	Cercocebus_atys
ENSLACG00000005731	NMD3	99	77.346	ENSCLAG00000003155	NMD3	99	74.297	Chinchilla_lanigera
ENSLACG00000005731	NMD3	99	78.947	ENSCSAG00000012333	NMD3	99	76.104	Chlorocebus_sabaeus
ENSLACG00000005731	NMD3	76	75.229	ENSCHOG00000001240	NMD3	79	70.968	Choloepus_hoffmanni
ENSLACG00000005731	NMD3	99	83.982	ENSCPBG00000018318	NMD3	99	80.522	Chrysemys_picta_bellii
ENSLACG00000005731	NMD3	96	57.611	ENSCING00000002129	-	96	53.926	Ciona_intestinalis
ENSLACG00000005731	NMD3	87	57.292	ENSCSAVG00000001120	-	97	53.759	Ciona_savignyi
ENSLACG00000005731	NMD3	99	72.540	ENSCANG00000042939	NMD3	94	69.880	Colobus_angolensis_palliatus
ENSLACG00000005731	NMD3	99	62.471	ENSCGRG00001001792	Nmd3	99	61.446	Cricetulus_griseus_chok1gshd
ENSLACG00000005731	NMD3	96	78.066	ENSCGRG00000007947	Nmd3	97	75.052	Cricetulus_griseus_crigri
ENSLACG00000005731	NMD3	99	81.693	ENSCSEG00000017954	nmd3	99	78.357	Cynoglossus_semilaevis
ENSLACG00000005731	NMD3	100	72.074	ENSCVAG00000004672	nmd3	99	73.101	Cyprinodon_variegatus
ENSLACG00000005731	NMD3	99	79.405	ENSDARG00000015676	nmd3	99	76.200	Danio_rerio
ENSLACG00000005731	NMD3	99	77.117	ENSDNOG00000045222	NMD3	99	74.297	Dasypus_novemcinctus
ENSLACG00000005731	NMD3	100	66.871	ENSDORG00000005716	Nmd3	100	68.421	Dipodomys_ordii
ENSLACG00000005731	NMD3	95	59.382	FBgn0023542	Nmd3	95	55.263	Drosophila_melanogaster
ENSLACG00000005731	NMD3	99	64.989	ENSETEG00000003168	NMD3	99	63.655	Echinops_telfairi
ENSLACG00000005731	NMD3	86	62.105	ENSEBUG00000014316	nmd3	95	57.834	Eptatretus_burgeri
ENSLACG00000005731	NMD3	99	78.719	ENSEASG00005018672	NMD3	99	75.904	Equus_asinus_asinus
ENSLACG00000005731	NMD3	99	78.947	ENSECAG00000000188	NMD3	97	76.056	Equus_caballus
ENSLACG00000005731	NMD3	96	54.265	ENSEEUG00000010642	-	100	53.291	Erinaceus_europaeus
ENSLACG00000005731	NMD3	99	80.092	ENSELUG00000024123	nmd3	99	76.553	Esox_lucius
ENSLACG00000005731	NMD3	99	78.719	ENSFCAG00000022867	NMD3	99	75.904	Felis_catus
ENSLACG00000005731	NMD3	92	81.527	ENSFALG00000008711	NMD3	99	78.158	Ficedula_albicollis
ENSLACG00000005731	NMD3	99	76.888	ENSFDAG00000013724	-	99	73.896	Fukomys_damarensis
ENSLACG00000005731	NMD3	98	62.551	ENSFDAG00000012197	-	97	62.630	Fukomys_damarensis
ENSLACG00000005731	NMD3	99	80.092	ENSFHEG00000000415	nmd3	99	76.754	Fundulus_heteroclitus
ENSLACG00000005731	NMD3	96	78.673	ENSGMOG00000009675	nmd3	99	73.967	Gadus_morhua
ENSLACG00000005731	NMD3	99	80.320	ENSGALG00000009533	NMD3	99	77.510	Gallus_gallus
ENSLACG00000005731	NMD3	99	80.549	ENSGAFG00000012798	nmd3	94	76.707	Gambusia_affinis
ENSLACG00000005731	NMD3	99	80.092	ENSGACG00000010028	nmd3	99	76.353	Gasterosteus_aculeatus
ENSLACG00000005731	NMD3	99	83.066	ENSGAGG00000006556	NMD3	99	79.920	Gopherus_agassizii
ENSLACG00000005731	NMD3	99	78.490	ENSGGOG00000007157	NMD3	99	75.703	Gorilla_gorilla
ENSLACG00000005731	NMD3	99	63.844	ENSGGOG00000028590	-	99	61.368	Gorilla_gorilla
ENSLACG00000005731	NMD3	99	81.922	ENSHBUG00000001781	nmd3	99	78.156	Haplochromis_burtoni
ENSLACG00000005731	NMD3	99	76.888	ENSHGLG00000014451	-	99	74.297	Heterocephalus_glaber_female
ENSLACG00000005731	NMD3	100	58.835	ENSHGLG00000010477	-	99	58.835	Heterocephalus_glaber_female
ENSLACG00000005731	NMD3	100	59.237	ENSHGLG00100001042	-	99	59.237	Heterocephalus_glaber_male
ENSLACG00000005731	NMD3	99	76.888	ENSHGLG00100006613	-	99	74.297	Heterocephalus_glaber_male
ENSLACG00000005731	NMD3	99	81.007	ENSHCOG00000004292	nmd3	91	77.756	Hippocampus_comes
ENSLACG00000005731	NMD3	99	78.261	ENSIPUG00000005073	nmd3	99	74.749	Ictalurus_punctatus
ENSLACG00000005731	NMD3	99	78.032	ENSSTOG00000001899	NMD3	99	75.301	Ictidomys_tridecemlineatus
ENSLACG00000005731	NMD3	96	78.910	ENSJJAG00000019759	Nmd3	99	75.983	Jaculus_jaculus
ENSLACG00000005731	NMD3	99	81.922	ENSKMAG00000020427	nmd3	99	78.357	Kryptolebias_marmoratus
ENSLACG00000005731	NMD3	99	81.007	ENSLBEG00000022216	nmd3	99	76.647	Labrus_bergylta
ENSLACG00000005731	NMD3	99	84.668	ENSLOCG00000003561	nmd3	99	80.962	Lepisosteus_oculatus
ENSLACG00000005731	NMD3	99	76.484	ENSLAFG00000007231	NMD3	99	73.347	Loxodonta_africana
ENSLACG00000005731	NMD3	99	78.947	ENSMFAG00000040934	NMD3	99	76.104	Macaca_fascicularis
ENSLACG00000005731	NMD3	99	78.947	ENSMMUG00000009564	NMD3	97	74.183	Macaca_mulatta
ENSLACG00000005731	NMD3	99	78.947	ENSMNEG00000034626	NMD3	99	76.104	Macaca_nemestrina
ENSLACG00000005731	NMD3	85	80.371	ENSMLEG00000002741	NMD3	99	76.941	Mandrillus_leucophaeus
ENSLACG00000005731	NMD3	99	81.465	ENSMAMG00000012427	nmd3	99	77.555	Mastacembelus_armatus
ENSLACG00000005731	NMD3	99	81.922	ENSMZEG00005016888	nmd3	99	78.156	Maylandia_zebra
ENSLACG00000005731	NMD3	99	81.007	ENSMGAG00000010498	NMD3	99	77.510	Meleagris_gallopavo
ENSLACG00000005731	NMD3	99	77.117	ENSMAUG00000000633	Nmd3	99	74.096	Mesocricetus_auratus
ENSLACG00000005731	NMD3	99	77.803	ENSMICG00000049196	NMD3	99	75.100	Microcebus_murinus
ENSLACG00000005731	NMD3	99	76.147	ENSMOCG00000005180	Nmd3	99	73.441	Microtus_ochrogaster
ENSLACG00000005731	NMD3	99	80.822	ENSMMOG00000012765	nmd3	99	77.400	Mola_mola
ENSLACG00000005731	NMD3	80	76.627	ENSMODG00000016296	NMD3	99	60.385	Monodelphis_domestica
ENSLACG00000005731	NMD3	99	81.693	ENSMALG00000009256	nmd3	99	77.956	Monopterus_albus
ENSLACG00000005731	NMD3	99	77.117	MGP_CAROLIEiJ_G0025069	Nmd3	99	74.096	Mus_caroli
ENSLACG00000005731	NMD3	99	76.888	ENSMUSG00000027787	Nmd3	99	73.896	Mus_musculus
ENSLACG00000005731	NMD3	99	76.659	MGP_PahariEiJ_G0026512	Nmd3	99	73.896	Mus_pahari
ENSLACG00000005731	NMD3	99	77.117	MGP_SPRETEiJ_G0026011	Nmd3	99	74.096	Mus_spretus
ENSLACG00000005731	NMD3	99	78.261	ENSMPUG00000002955	NMD3	99	75.502	Mustela_putorius_furo
ENSLACG00000005731	NMD3	99	72.727	ENSMLUG00000000701	NMD3	99	70.659	Myotis_lucifugus
ENSLACG00000005731	NMD3	99	77.574	ENSNGAG00000012307	Nmd3	99	74.297	Nannospalax_galili
ENSLACG00000005731	NMD3	99	81.693	ENSNBRG00000003324	nmd3	99	77.956	Neolamprologus_brichardi
ENSLACG00000005731	NMD3	99	78.261	ENSNLEG00000004655	NMD3	99	75.502	Nomascus_leucogenys
ENSLACG00000005731	NMD3	72	71.053	ENSOPRG00000007690	-	72	71.053	Ochotona_princeps
ENSLACG00000005731	NMD3	99	78.261	ENSODEG00000006270	NMD3	99	75.502	Octodon_degus
ENSLACG00000005731	NMD3	99	82.609	ENSONIG00000003643	nmd3	99	78.557	Oreochromis_niloticus
ENSLACG00000005731	NMD3	99	78.032	ENSOCUG00000017454	NMD3	99	75.252	Oryctolagus_cuniculus
ENSLACG00000005731	NMD3	99	81.922	ENSORLG00000006279	nmd3	99	78.156	Oryzias_latipes
ENSLACG00000005731	NMD3	99	81.922	ENSORLG00020003843	nmd3	99	78.156	Oryzias_latipes_hni
ENSLACG00000005731	NMD3	99	81.693	ENSORLG00015006379	nmd3	99	78.313	Oryzias_latipes_hsok
ENSLACG00000005731	NMD3	99	81.236	ENSOMEG00000012144	nmd3	99	77.956	Oryzias_melastigma
ENSLACG00000005731	NMD3	99	77.346	ENSOGAG00000014910	NMD3	99	74.498	Otolemur_garnettii
ENSLACG00000005731	NMD3	99	77.397	ENSOARG00000001883	NMD3	97	74.549	Ovis_aries
ENSLACG00000005731	NMD3	99	78.261	ENSPPAG00000043829	NMD3	99	75.502	Pan_paniscus
ENSLACG00000005731	NMD3	99	78.261	ENSPPRG00000000724	NMD3	97	75.301	Panthera_pardus
ENSLACG00000005731	NMD3	99	78.032	ENSPTIG00000016761	NMD3	99	75.301	Panthera_tigris_altaica
ENSLACG00000005731	NMD3	99	78.261	ENSPTRG00000015586	NMD3	99	75.502	Pan_troglodytes
ENSLACG00000005731	NMD3	99	78.947	ENSPANG00000006665	NMD3	94	75.904	Papio_anubis
ENSLACG00000005731	NMD3	99	81.465	ENSPKIG00000009928	nmd3	99	77.355	Paramormyrops_kingsleyae
ENSLACG00000005731	NMD3	99	83.066	ENSPSIG00000007591	NMD3	99	79.317	Pelodiscus_sinensis
ENSLACG00000005731	NMD3	99	75.973	ENSPMGG00000014015	nmd3	99	73.347	Periophthalmus_magnuspinnatus
ENSLACG00000005731	NMD3	99	77.803	ENSPEMG00000021880	Nmd3	99	74.900	Peromyscus_maniculatus_bairdii
ENSLACG00000005731	NMD3	99	80.778	ENSPCIG00000020869	NMD3	99	78.112	Phascolarctos_cinereus
ENSLACG00000005731	NMD3	99	81.693	ENSPFOG00000012103	nmd3	99	77.956	Poecilia_formosa
ENSLACG00000005731	NMD3	99	81.693	ENSPLAG00000008087	nmd3	99	77.956	Poecilia_latipinna
ENSLACG00000005731	NMD3	99	81.693	ENSPMEG00000008506	nmd3	99	77.956	Poecilia_mexicana
ENSLACG00000005731	NMD3	99	81.693	ENSPREG00000001848	nmd3	99	77.956	Poecilia_reticulata
ENSLACG00000005731	NMD3	99	78.719	ENSPPYG00000014263	NMD3	99	75.904	Pongo_abelii
ENSLACG00000005731	NMD3	93	66.910	ENSPCAG00000009851	NMD3	89	66.910	Procavia_capensis
ENSLACG00000005731	NMD3	85	73.109	ENSPVAG00000003301	NMD3	84	73.109	Pteropus_vampyrus
ENSLACG00000005731	NMD3	99	82.151	ENSPNYG00000006778	nmd3	99	78.357	Pundamilia_nyererei
ENSLACG00000005731	NMD3	99	81.465	ENSPNAG00000009442	nmd3	99	77.355	Pygocentrus_nattereri
ENSLACG00000005731	NMD3	99	76.430	ENSRNOG00000009310	Nmd3	99	73.695	Rattus_norvegicus
ENSLACG00000005731	NMD3	99	73.913	ENSRBIG00000040379	NMD3	99	71.687	Rhinopithecus_bieti
ENSLACG00000005731	NMD3	99	78.032	ENSRROG00000036181	NMD3	99	75.301	Rhinopithecus_roxellana
ENSLACG00000005731	NMD3	97	46.636	YHR170W	NMD3	94	43.058	Saccharomyces_cerevisiae
ENSLACG00000005731	NMD3	96	80.095	ENSSBOG00000024021	NMD3	96	77.019	Saimiri_boliviensis_boliviensis
ENSLACG00000005731	NMD3	99	76.201	ENSSHAG00000016044	NMD3	99	73.695	Sarcophilus_harrisii
ENSLACG00000005731	NMD3	99	81.465	ENSSFOG00015003609	nmd3	99	77.555	Scleropages_formosus
ENSLACG00000005731	NMD3	99	79.634	ENSSMAG00000012887	nmd3	99	76.353	Scophthalmus_maximus
ENSLACG00000005731	NMD3	99	81.693	ENSSDUG00000023721	nmd3	99	78.357	Seriola_dumerili
ENSLACG00000005731	NMD3	99	81.693	ENSSLDG00000006565	nmd3	99	78.357	Seriola_lalandi_dorsalis
ENSLACG00000005731	NMD3	96	78.487	ENSSARG00000010402	NMD3	99	75.362	Sorex_araneus
ENSLACG00000005731	NMD3	99	81.007	ENSSPUG00000018791	NMD3	99	77.711	Sphenodon_punctatus
ENSLACG00000005731	NMD3	99	83.295	ENSSPAG00000014328	nmd3	99	79.359	Stegastes_partitus
ENSLACG00000005731	NMD3	99	77.117	ENSSSCG00000022952	NMD3	99	74.297	Sus_scrofa
ENSLACG00000005731	NMD3	99	79.634	ENSTGUG00000011140	-	99	76.707	Taeniopygia_guttata
ENSLACG00000005731	NMD3	90	78.030	ENSTGUG00000015141	-	99	75.055	Taeniopygia_guttata
ENSLACG00000005731	NMD3	99	81.465	ENSTRUG00000005958	nmd3	99	77.555	Takifugu_rubripes
ENSLACG00000005731	NMD3	100	53.414	ENSTBEG00000011783	-	99	53.414	Tupaia_belangeri
ENSLACG00000005731	NMD3	99	72.998	ENSTTRG00000012938	NMD3	99	70.683	Tursiops_truncatus
ENSLACG00000005731	NMD3	95	76.794	ENSUAMG00000009305	-	99	78.856	Ursus_americanus
ENSLACG00000005731	NMD3	99	78.261	ENSUMAG00000011070	NMD3	99	75.050	Ursus_maritimus
ENSLACG00000005731	NMD3	99	77.346	ENSVPAG00000008779	NMD3	99	74.498	Vicugna_pacos
ENSLACG00000005731	NMD3	99	77.346	ENSVVUG00000023055	NMD3	99	74.699	Vulpes_vulpes
ENSLACG00000005731	NMD3	99	83.753	ENSXETG00000027727	nmd3	99	79.719	Xenopus_tropicalis
ENSLACG00000005731	NMD3	64	72.109	ENSXCOG00000012490	nmd3	84	71.717	Xiphophorus_couchianus
ENSLACG00000005731	NMD3	99	81.007	ENSXMAG00000018406	nmd3	99	77.355	Xiphophorus_maculatus