EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLACG00000005762 (Gene tree)
Gene ID
102356429
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Minus strand
Length
30943 bases
Position
chrJH127977.1:183387-214329
Accession
102356429
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000006502PABPPF00658.189e-2411
ENSLACP00000022189RRM_5PF13893.62.8e-0811
ENSLACP00000006502RRM_5PF13893.66.2e-0811
ENSLACP00000022189RRM_1PF00076.221.3e-8914
ENSLACP00000022189RRM_1PF00076.221.3e-8924
ENSLACP00000022189RRM_1PF00076.221.3e-8934
ENSLACP00000022189RRM_1PF00076.221.3e-8944
ENSLACP00000006502RRM_1PF00076.222.7e-8914
ENSLACP00000006502RRM_1PF00076.222.7e-8924
ENSLACP00000006502RRM_1PF00076.222.7e-8934
ENSLACP00000006502RRM_1PF00076.222.7e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000025846PABPC1L-2022061-ENSLACP00000022189548 (aa)-M3XHI3
ENSLACT00000006555PABPC1L-2011920XM_006006840ENSLACP00000006502639 (aa)-H3AA31
Gene Model
Click here to download ENSLACG00000005762's gene model file
Pathways
Pathway IDPathway NameSource
lcm03013RNA transportKEGG
lcm03015mRNA surveillance pathwayKEGG
lcm03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005762's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLACG00000005762PABPC1L5138.554ENSLACG00000016391elavl39738.554
ENSLACG00000005762PABPC1L9973.396ENSLACG00000004395PABPC19873.594
ENSLACG00000005762PABPC1L6732.468ENSLACG00000010485-7630.178
ENSLACG00000005762PABPC1L6431.098ENSLACG00000014480HNRNPA06231.098
ENSLACG00000005762PABPC1L5536.986ENSLACG00000002301CELF36236.986
ENSLACG00000005762PABPC1L6838.554ENSLACG00000010888ELAVL29338.554
ENSLACG00000005762PABPC1L5232.258ENSLACG00000005541TRNAU1AP7730.952
ENSLACG00000005762PABPC1L6630.178ENSLACG00000005306HNRNPD5430.000
ENSLACG00000005762PABPC1L5334.884ENSLACG00000009779CELF25434.884
ENSLACG00000005762PABPC1L7433.146ENSLACG00000017828TIA18533.146
ENSLACG00000005762PABPC1L9968.069ENSLACG00000011907PABPC49969.051
ENSLACG00000005762PABPC1L6639.674ENSLACG00000004436SF3B49339.674
ENSLACG00000005762PABPC1L7537.234ENSLACG00000016576-6637.234
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000005762PABPC1L9971.140ENSG00000101104PABPC1L9879.938Homo_sapiens
ENSLACG00000005762PABPC1L9970.826ENSAPOG00000010842pabpc1l9969.051Acanthochromis_polyacanthus
ENSLACG00000005762PABPC1L9863.885ENSAMEG00000004099PABPC1L10065.191Ailuropoda_melanoleuca
ENSLACG00000005762PABPC1L9777.098ENSACIG00000021004-9977.098Amphilophus_citrinellus
ENSLACG00000005762PABPC1L9573.603ENSAOCG00000006167-9969.735Amphiprion_ocellaris
ENSLACG00000005762PABPC1L9975.626ENSAPEG00000010558-9984.507Amphiprion_percula
ENSLACG00000005762PABPC1L9972.214ENSATEG00000007428pabpc1l9972.214Anabas_testudineus
ENSLACG00000005762PABPC1L9777.903ENSAPLG00000008415PABPC1L9974.922Anas_platyrhynchos
ENSLACG00000005762PABPC1L9879.592ENSACAG00000011841PABPC1L9976.719Anolis_carolinensis
ENSLACG00000005762PABPC1L9970.037ENSANAG00000026826PABPC1L9968.680Aotus_nancymaae
ENSLACG00000005762PABPC1L9973.309ENSACLG00000024791pabpc1l9972.370Astatotilapia_calliptera
ENSLACG00000005762PABPC1L9877.180ENSAMXG00000013552pabpc1l9974.214Astyanax_mexicanus
ENSLACG00000005762PABPC1L7466.667ENSBTAG00000016849PABPC1L8566.667Bos_taurus
ENSLACG00000005762PABPC1L6791.667ENSBTAG00000055300-10091.667Bos_taurus
ENSLACG00000005762PABPC1L9970.588ENSCJAG00000017628PABPC1L9969.157Callithrix_jacchus
ENSLACG00000005762PABPC1L6781.609ENSCJAG00000038506-10081.609Callithrix_jacchus
ENSLACG00000005762PABPC1L9864.580ENSCAFG00000009573PABPC1L10064.580Canis_familiaris
ENSLACG00000005762PABPC1L9869.668ENSCAFG00020013828PABPC1L9969.668Canis_lupus_dingo
ENSLACG00000005762PABPC1L9872.491ENSCHIG00000025759PABPC1L9169.243Capra_hircus
ENSLACG00000005762PABPC1L9971.193ENSTSYG00000006645PABPC1L9969.206Carlito_syrichta
ENSLACG00000005762PABPC1L9864.000ENSCAPG00000014519PABPC1L9962.679Cavia_aperea
ENSLACG00000005762PABPC1L9967.582ENSCPOG00000013633PABPC1L9966.244Cavia_porcellus
ENSLACG00000005762PABPC1L9970.221ENSCCAG00000023338PABPC1L9968.839Cebus_capucinus
ENSLACG00000005762PABPC1L9971.140ENSCATG00000034065PABPC1L9969.793Cercocebus_atys
ENSLACG00000005762PABPC1L9967.582ENSCLAG00000005298PABPC1L9966.719Chinchilla_lanigera
ENSLACG00000005762PABPC1L9971.009ENSCSAG00000014242PABPC1L9969.683Chlorocebus_sabaeus
ENSLACG00000005762PABPC1L8186.486ENSCPBG00000017755-9986.486Chrysemys_picta_bellii
ENSLACG00000005762PABPC1L6484.328ENSCPBG00000007810-9484.328Chrysemys_picta_bellii
ENSLACG00000005762PABPC1L9749.708ENSCING00000002796-9750.097Ciona_intestinalis
ENSLACG00000005762PABPC1L9763.927ENSCSAVG00000003102-10084.564Ciona_savignyi
ENSLACG00000005762PABPC1L9870.588ENSCSAVG00000004246-9670.588Ciona_savignyi
ENSLACG00000005762PABPC1L9868.289ENSCANG00000037530PABPC1L9968.495Colobus_angolensis_palliatus
ENSLACG00000005762PABPC1L9962.842ENSCGRG00001021938Pabpc1l9961.137Cricetulus_griseus_chok1gshd
ENSLACG00000005762PABPC1L9962.842ENSCGRG00000007946Pabpc1l9961.137Cricetulus_griseus_crigri
ENSLACG00000005762PABPC1L9976.871ENSCSEG00000021295pabpc1l9976.871Cynoglossus_semilaevis
ENSLACG00000005762PABPC1L9973.091ENSCVAG00000015943-9990.076Cyprinodon_variegatus
ENSLACG00000005762PABPC1L9878.026ENSDARG00000002597pabpc1l8890.769Danio_rerio
ENSLACG00000005762PABPC1L9972.628ENSDNOG00000048450PABPC1L9970.932Dasypus_novemcinctus
ENSLACG00000005762PABPC1L9969.653ENSDORG00000001067Pabpc1l9967.717Dipodomys_ordii
ENSLACG00000005762PABPC1L9481.301ENSETEG00000009969PABPC1L7281.301Echinops_telfairi
ENSLACG00000005762PABPC1L6789.286ENSEASG00005023408-10089.286Equus_asinus_asinus
ENSLACG00000005762PABPC1L6371.277ENSEASG00005023407-7571.277Equus_asinus_asinus
ENSLACG00000005762PABPC1L7671.008ENSECAG00000040139-8471.008Equus_caballus
ENSLACG00000005762PABPC1L9967.192ENSEEUG00000005978PABPC1L9967.192Erinaceus_europaeus
ENSLACG00000005762PABPC1L9876.766ENSELUG00000001811pabpc1l9781.532Esox_lucius
ENSLACG00000005762PABPC1L9971.715ENSFCAG00000011692PABPC1L9970.142Felis_catus
ENSLACG00000005762PABPC1L9681.369ENSFALG00000005372PABPC1L9974.333Ficedula_albicollis
ENSLACG00000005762PABPC1L9865.079ENSFDAG00000008291PABPC1L9965.238Fukomys_damarensis
ENSLACG00000005762PABPC1L9974.081ENSFHEG00000003398pabpc1l9972.274Fundulus_heteroclitus
ENSLACG00000005762PABPC1L9972.871ENSGMOG00000004437pabpc1l9972.871Gadus_morhua
ENSLACG00000005762PABPC1L9683.683ENSGALG00000004123PABPC1L9887.167Gallus_gallus
ENSLACG00000005762PABPC1L9967.704ENSGAFG00000021057pabpc1l9967.704Gambusia_affinis
ENSLACG00000005762PABPC1L9576.099ENSGACG00000002792pabpc1l9972.013Gasterosteus_aculeatus
ENSLACG00000005762PABPC1L9880.334ENSGAGG00000000589PABPC1L9780.728Gopherus_agassizii
ENSLACG00000005762PABPC1L9971.140ENSGGOG00000004584PABPC1L9969.683Gorilla_gorilla
ENSLACG00000005762PABPC1L9973.309ENSHBUG00000006134pabpc1l9972.057Haplochromis_burtoni
ENSLACG00000005762PABPC1L9866.193ENSHGLG00000008434PABPC1L9966.667Heterocephalus_glaber_female
ENSLACG00000005762PABPC1L9866.193ENSHGLG00100012151PABPC1L9966.667Heterocephalus_glaber_male
ENSLACG00000005762PABPC1L6687.079ENSHGLG00100019506-10087.079Heterocephalus_glaber_male
ENSLACG00000005762PABPC1L9772.179ENSHCOG00000009270pabpc1l9970.540Hippocampus_comes
ENSLACG00000005762PABPC1L6760.714ENSIPUG00000006780-9460.714Ictalurus_punctatus
ENSLACG00000005762PABPC1L6763.218ENSIPUG00000006760-8863.218Ictalurus_punctatus
ENSLACG00000005762PABPC1L9878.212ENSIPUG00000012602pabpc1l9975.000Ictalurus_punctatus
ENSLACG00000005762PABPC1L9970.588ENSSTOG00000003739PABPC1L9969.157Ictidomys_tridecemlineatus
ENSLACG00000005762PABPC1L9954.357ENSJJAG00000022406Pabpc1l9954.145Jaculus_jaculus
ENSLACG00000005762PABPC1L9974.723ENSKMAG00000016847pabpc1l10073.071Kryptolebias_marmoratus
ENSLACG00000005762PABPC1L9873.792ENSLBEG00000010084pabpc1l9970.405Labrus_bergylta
ENSLACG00000005762PABPC1L9881.530ENSLOCG00000007519pabpc1l9878.673Lepisosteus_oculatus
ENSLACG00000005762PABPC1L9773.321ENSLAFG00000003553PABPC1L10070.487Loxodonta_africana
ENSLACG00000005762PABPC1L9971.507ENSMFAG00000040365PABPC1L9970.111Macaca_fascicularis
ENSLACG00000005762PABPC1L9573.040ENSMNEG00000032298PABPC1L9969.475Macaca_nemestrina
ENSLACG00000005762PABPC1L9971.140ENSMLEG00000043139PABPC1L9969.793Mandrillus_leucophaeus
ENSLACG00000005762PABPC1L9973.937ENSMAMG00000011854pabpc1l9772.771Mastacembelus_armatus
ENSLACG00000005762PABPC1L9973.309ENSMZEG00005023713pabpc1l9972.370Maylandia_zebra
ENSLACG00000005762PABPC1L9978.821ENSMGAG00000003674PABPC1L9975.545Meleagris_gallopavo
ENSLACG00000005762PABPC1L9962.956ENSMOCG00000013186Pabpc1l9961.006Microtus_ochrogaster
ENSLACG00000005762PABPC1L9972.196ENSMMOG00000020574-9090.769Mola_mola
ENSLACG00000005762PABPC1L9973.381ENSMODG00000016198PABPC1L9971.680Monodelphis_domestica
ENSLACG00000005762PABPC1L9574.952ENSMALG00000021622pabpc1l10071.129Monopterus_albus
ENSLACG00000005762PABPC1L9964.835MGP_CAROLIEiJ_G0024627Pabpc1l9962.520Mus_caroli
ENSLACG00000005762PABPC1L9964.652ENSMUSG00000054582Pabpc1l9962.362Mus_musculus
ENSLACG00000005762PABPC1L9964.652MGP_PahariEiJ_G0026071Pabpc1l9962.520Mus_pahari
ENSLACG00000005762PABPC1L9964.835MGP_SPRETEiJ_G0025549Pabpc1l9962.520Mus_spretus
ENSLACG00000005762PABPC1L9772.472ENSMPUG00000017646PABPC1L9970.159Mustela_putorius_furo
ENSLACG00000005762PABPC1L9766.457ENSMLUG00000006324PABPC1L9866.457Myotis_lucifugus
ENSLACG00000005762PABPC1L9965.688ENSNGAG00000010458Pabpc1l9963.349Nannospalax_galili
ENSLACG00000005762PABPC1L9779.717ENSNBRG00000016633pabpc1l9979.717Neolamprologus_brichardi
ENSLACG00000005762PABPC1L8976.907ENSMEUG00000007905-7876.907Notamacropus_eugenii
ENSLACG00000005762PABPC1L9969.669ENSOPRG00000011846PABPC1L9968.362Ochotona_princeps
ENSLACG00000005762PABPC1L9965.441ENSODEG00000015482PABPC1L9960.731Octodon_degus
ENSLACG00000005762PABPC1L6581.250ENSODEG00000002920-9781.250Octodon_degus
ENSLACG00000005762PABPC1L9973.675ENSONIG00000017314pabpc1l9972.370Oreochromis_niloticus
ENSLACG00000005762PABPC1L9169.461ENSOANG00000015793-9963.445Ornithorhynchus_anatinus
ENSLACG00000005762PABPC1L9864.502ENSOCUG00000003005PABPC1L9964.955Oryctolagus_cuniculus
ENSLACG00000005762PABPC1L9776.782ENSORLG00000010322pabpc1l9976.782Oryzias_latipes
ENSLACG00000005762PABPC1L9776.782ENSORLG00020021193pabpc1l9976.782Oryzias_latipes_hni
ENSLACG00000005762PABPC1L9776.782ENSORLG00015017018pabpc1l9976.782Oryzias_latipes_hsok
ENSLACG00000005762PABPC1L9969.271ENSOMEG00000010789pabpc1l9968.209Oryzias_melastigma
ENSLACG00000005762PABPC1L9771.375ENSOGAG00000032999PABPC1L9969.352Otolemur_garnettii
ENSLACG00000005762PABPC1L9969.668ENSOARG00000004578PABPC1L9969.668Ovis_aries
ENSLACG00000005762PABPC1L9971.324ENSPPAG00000039677PABPC1L9969.952Pan_paniscus
ENSLACG00000005762PABPC1L7071.914ENSPPRG00000019327-9871.914Panthera_pardus
ENSLACG00000005762PABPC1L9871.402ENSPTIG00000006524PABPC1L9969.856Panthera_tigris_altaica
ENSLACG00000005762PABPC1L7080.247ENSPTRG00000013531PABPC1L9880.247Pan_troglodytes
ENSLACG00000005762PABPC1L9971.140ENSPANG00000018788PABPC1L9969.793Papio_anubis
ENSLACG00000005762PABPC1L6086.260ENSPKIG00000016810-9386.260Paramormyrops_kingsleyae
ENSLACG00000005762PABPC1L9976.937ENSPKIG00000007322pabpc1l9975.158Paramormyrops_kingsleyae
ENSLACG00000005762PABPC1L7686.811ENSPSIG00000013289PABPC1L9986.874Pelodiscus_sinensis
ENSLACG00000005762PABPC1L7088.636ENSPMGG00000023117pabpc1l9988.636Periophthalmus_magnuspinnatus
ENSLACG00000005762PABPC1L7973.469ENSPMGG00000023121-9074.490Periophthalmus_magnuspinnatus
ENSLACG00000005762PABPC1L9963.158ENSPEMG00000020671Pabpc1l10060.896Peromyscus_maniculatus_bairdii
ENSLACG00000005762PABPC1L9972.598ENSPFOG00000013241pabpc1l9972.598Poecilia_formosa
ENSLACG00000005762PABPC1L7091.538ENSPLAG00000023686-9291.538Poecilia_latipinna
ENSLACG00000005762PABPC1L9972.274ENSPLAG00000017490-9972.274Poecilia_latipinna
ENSLACG00000005762PABPC1L9575.810ENSPMEG00000007677pabpc1l9971.763Poecilia_mexicana
ENSLACG00000005762PABPC1L7091.538ENSPMEG00000009185-8891.538Poecilia_mexicana
ENSLACG00000005762PABPC1L7584.019ENSPREG00000015886pabpc1l9984.019Poecilia_reticulata
ENSLACG00000005762PABPC1L9971.324ENSPPYG00000011042PABPC1L9969.952Pongo_abelii
ENSLACG00000005762PABPC1L6989.062ENSPCAG00000011787-7589.062Procavia_capensis
ENSLACG00000005762PABPC1L9971.743ENSPCOG00000020630PABPC1L10069.984Propithecus_coquereli
ENSLACG00000005762PABPC1L9970.255ENSPVAG00000012663PABPC1L9968.878Pteropus_vampyrus
ENSLACG00000005762PABPC1L9779.717ENSPNYG00000004101pabpc1l9979.717Pundamilia_nyererei
ENSLACG00000005762PABPC1L9869.888ENSPNAG00000021248pabpc1l9967.919Pygocentrus_nattereri
ENSLACG00000005762PABPC1L9964.469ENSRNOG00000012750Pabpc1l9962.500Rattus_norvegicus
ENSLACG00000005762PABPC1L9971.324ENSRBIG00000035381PABPC1L9969.952Rhinopithecus_bieti
ENSLACG00000005762PABPC1L9971.140ENSRROG00000044498PABPC1L9969.793Rhinopithecus_roxellana
ENSLACG00000005762PABPC1L9970.221ENSSBOG00000009532-9968.839Saimiri_boliviensis_boliviensis
ENSLACG00000005762PABPC1L9668.204ENSSHAG00000011446PABPC1L10065.878Sarcophilus_harrisii
ENSLACG00000005762PABPC1L9978.044ENSSFOG00015017304pabpc1l9976.266Scleropages_formosus
ENSLACG00000005762PABPC1L9881.306ENSSMAG00000010516pabpc1l9887.500Scophthalmus_maximus
ENSLACG00000005762PABPC1L9874.254ENSSDUG00000014743pabpc1l9971.607Seriola_dumerili
ENSLACG00000005762PABPC1L9877.449ENSSLDG00000006981pabpc1l9888.517Seriola_lalandi_dorsalis
ENSLACG00000005762PABPC1L9978.821ENSSPUG00000004233PABPC1L9975.705Sphenodon_punctatus
ENSLACG00000005762PABPC1L8577.027ENSSPAG00000017137pabpc1l9677.027Stegastes_partitus
ENSLACG00000005762PABPC1L9970.438ENSSSCG00000007382PABPC1L9968.603Sus_scrofa
ENSLACG00000005762PABPC1L9679.182ENSTGUG00000005114PABPC1L10075.116Taeniopygia_guttata
ENSLACG00000005762PABPC1L9874.721ENSTRUG00000011085pabpc1l9771.865Takifugu_rubripes
ENSLACG00000005762PABPC1L9574.618ENSTNIG00000017903pabpc1l9970.405Tetraodon_nigroviridis
ENSLACG00000005762PABPC1L9381.507ENSTBEG00000002851PABPC1L7981.507Tupaia_belangeri
ENSLACG00000005762PABPC1L9970.275ENSTTRG00000007618PABPC1L10068.293Tursiops_truncatus
ENSLACG00000005762PABPC1L9868.045ENSUAMG00000017682PABPC1L9968.045Ursus_americanus
ENSLACG00000005762PABPC1L7876.440ENSUMAG00000025436PABPC1L9676.440Ursus_maritimus
ENSLACG00000005762PABPC1L9779.447ENSVVUG00000018939PABPC1L9879.447Vulpes_vulpes
ENSLACG00000005762PABPC1L9875.279ENSXETG00000022831pabpc1l9973.742Xenopus_tropicalis
ENSLACG00000005762PABPC1L9778.588ENSXCOG00000005459pabpc1l9986.525Xiphophorus_couchianus
ENSLACG00000005762PABPC1L9971.073ENSXMAG00000017135pabpc1l9971.073Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us