EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005800 (Gene tree)
Gene ID: 106706918
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 13873 bases
Position: chrJH129769.1:186057-199929
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006543	Sua5_yciO_yrdC	PF01300.18	1.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006596	-	2505	-	ENSLACP00000006543	835 (aa)	-	H3AA72

Gene Model

Click here to download ENSLACG00000005800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005800	-	76	31.505	ENSLACG00000017592	si:ch211-153b23.4	74	31.505

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005800	-	92	70.659	ENSACIG00000006968	si:ch211-153b23.3	94	70.659	Amphilophus_citrinellus
ENSLACG00000005800	-	99	56.770	ENSAOCG00000010974	si:ch211-153b23.3	94	56.584	Amphiprion_ocellaris
ENSLACG00000005800	-	99	56.888	ENSAPEG00000014700	si:ch211-153b23.3	94	56.651	Amphiprion_percula
ENSLACG00000005800	-	77	30.108	ENSATEG00000004948	si:ch211-153b23.4	71	30.108	Anabas_testudineus
ENSLACG00000005800	-	99	56.198	ENSATEG00000004956	si:ch211-153b23.3	94	56.066	Anabas_testudineus
ENSLACG00000005800	-	74	31.579	ENSAPLG00000013596	-	73	31.579	Anas_platyrhynchos
ENSLACG00000005800	-	99	57.619	ENSACLG00000005894	si:ch211-153b23.3	94	57.619	Astatotilapia_calliptera
ENSLACG00000005800	-	77	30.475	ENSACLG00000005471	si:ch211-153b23.4	71	30.475	Astatotilapia_calliptera
ENSLACG00000005800	-	76	30.864	ENSAMXG00000013879	si:ch211-153b23.4	74	30.864	Astyanax_mexicanus
ENSLACG00000005800	-	99	57.177	ENSAMXG00000038564	si:ch211-153b23.3	94	57.295	Astyanax_mexicanus
ENSLACG00000005800	-	99	55.266	ENSCSEG00000014853	si:ch211-153b23.3	94	55.148	Cynoglossus_semilaevis
ENSLACG00000005800	-	79	30.655	ENSCVAG00000021145	si:ch211-153b23.4	80	30.655	Cyprinodon_variegatus
ENSLACG00000005800	-	99	57.788	ENSCVAG00000021124	si:ch211-153b23.3	94	57.770	Cyprinodon_variegatus
ENSLACG00000005800	-	99	58.711	ENSDARG00000104919	si:ch211-153b23.3	94	58.873	Danio_rerio
ENSLACG00000005800	-	92	52.191	ENSELUG00000004912	si:ch211-153b23.3	92	52.191	Esox_lucius
ENSLACG00000005800	-	76	30.120	ENSFALG00000011343	-	72	30.120	Ficedula_albicollis
ENSLACG00000005800	-	99	57.432	ENSFHEG00000010030	si:ch211-153b23.3	94	57.194	Fundulus_heteroclitus
ENSLACG00000005800	-	81	45.161	ENSFHEG00000009888	si:ch211-153b23.4	71	45.161	Fundulus_heteroclitus
ENSLACG00000005800	-	79	30.045	ENSFHEG00000010001	si:ch211-153b23.4	81	30.045	Fundulus_heteroclitus
ENSLACG00000005800	-	99	58.026	ENSGAFG00000007455	si:ch211-153b23.3	94	57.533	Gambusia_affinis
ENSLACG00000005800	-	99	57.262	ENSHBUG00000001760	si:ch211-153b23.3	94	57.619	Haplochromis_burtoni
ENSLACG00000005800	-	99	60.479	ENSIPUG00000015213	si:ch211-153b23.3	94	60.120	Ictalurus_punctatus
ENSLACG00000005800	-	99	56.480	ENSKMAG00000006792	si:ch211-153b23.3	94	56.413	Kryptolebias_marmoratus
ENSLACG00000005800	-	82	30.014	ENSLBEG00000026309	si:ch211-153b23.4	75	30.014	Labrus_bergylta
ENSLACG00000005800	-	99	57.261	ENSLBEG00000026324	si:ch211-153b23.3	94	57.261	Labrus_bergylta
ENSLACG00000005800	-	86	55.407	ENSLOCG00000015063	si:ch211-153b23.3	91	57.042	Lepisosteus_oculatus
ENSLACG00000005800	-	77	30.428	ENSMAMG00000009277	si:ch211-153b23.4	75	30.428	Mastacembelus_armatus
ENSLACG00000005800	-	99	56.450	ENSMAMG00000009328	si:ch211-153b23.3	94	56.434	Mastacembelus_armatus
ENSLACG00000005800	-	77	30.275	ENSMAMG00000009358	si:ch211-153b23.4	77	30.275	Mastacembelus_armatus
ENSLACG00000005800	-	77	30.322	ENSMZEG00005011433	si:ch211-153b23.4	76	30.322	Maylandia_zebra
ENSLACG00000005800	-	99	57.619	ENSMZEG00005011450	si:ch211-153b23.3	94	57.619	Maylandia_zebra
ENSLACG00000005800	-	69	58.355	ENSMGAG00000005489	-	99	70.213	Meleagris_gallopavo
ENSLACG00000005800	-	99	56.548	ENSMMOG00000004436	si:ch211-153b23.3	94	57.024	Mola_mola
ENSLACG00000005800	-	99	57.770	ENSNBRG00000013370	si:ch211-153b23.3	94	57.738	Neolamprologus_brichardi
ENSLACG00000005800	-	77	30.168	ENSNBRG00000013392	si:ch211-153b23.4	79	30.168	Neolamprologus_brichardi
ENSLACG00000005800	-	77	30.046	ENSONIG00000017875	si:ch211-153b23.4	71	30.046	Oreochromis_niloticus
ENSLACG00000005800	-	99	56.527	ENSORLG00000006161	si:ch211-153b23.3	94	56.731	Oryzias_latipes
ENSLACG00000005800	-	96	56.227	ENSORLG00020000910	si:ch211-153b23.3	94	56.436	Oryzias_latipes_hni
ENSLACG00000005800	-	96	55.857	ENSORLG00015003698	si:ch211-153b23.3	94	56.064	Oryzias_latipes_hsok
ENSLACG00000005800	-	99	57.812	ENSOMEG00000007661	si:ch211-153b23.3	94	57.812	Oryzias_melastigma
ENSLACG00000005800	-	96	58.065	ENSPKIG00000022450	si:ch211-153b23.3	94	58.065	Paramormyrops_kingsleyae
ENSLACG00000005800	-	99	57.429	ENSPKIG00000021029	-	94	57.665	Paramormyrops_kingsleyae
ENSLACG00000005800	-	71	30.283	ENSPKIG00000014429	si:ch211-153b23.4	68	30.283	Paramormyrops_kingsleyae
ENSLACG00000005800	-	80	60.568	ENSPMGG00000001311	si:ch211-153b23.3	91	61.514	Periophthalmus_magnuspinnatus
ENSLACG00000005800	-	79	30.253	ENSPFOG00000012164	si:ch211-153b23.4	91	30.253	Poecilia_formosa
ENSLACG00000005800	-	99	58.383	ENSPFOG00000012289	si:ch211-153b23.3	94	57.907	Poecilia_formosa
ENSLACG00000005800	-	99	57.788	ENSPLAG00000016320	si:ch211-153b23.3	94	57.432	Poecilia_latipinna
ENSLACG00000005800	-	99	57.788	ENSPMEG00000008884	si:ch211-153b23.3	94	57.313	Poecilia_mexicana
ENSLACG00000005800	-	99	57.143	ENSPNYG00000000251	si:ch211-153b23.3	94	57.500	Pundamilia_nyererei
ENSLACG00000005800	-	77	30.322	ENSPNYG00000000250	si:ch211-153b23.4	76	30.322	Pundamilia_nyererei
ENSLACG00000005800	-	99	59.193	ENSPNAG00000019592	si:ch211-153b23.3	95	58.747	Pygocentrus_nattereri
ENSLACG00000005800	-	73	58.587	ENSSFOG00015009030	-	96	58.587	Scleropages_formosus
ENSLACG00000005800	-	99	60.000	ENSSFOG00015010910	si:ch211-153b23.3	94	60.000	Scleropages_formosus
ENSLACG00000005800	-	99	56.821	ENSSMAG00000005446	si:ch211-153b23.3	94	57.295	Scophthalmus_maximus
ENSLACG00000005800	-	99	57.920	ENSSLDG00000008629	si:ch211-153b23.3	94	57.565	Seriola_lalandi_dorsalis
ENSLACG00000005800	-	77	30.455	ENSTGUG00000005499	-	76	30.455	Taeniopygia_guttata
ENSLACG00000005800	-	99	54.621	ENSTRUG00000020530	si:ch211-153b23.3	95	55.702	Takifugu_rubripes
ENSLACG00000005800	-	99	52.221	ENSTNIG00000008962	si:ch211-153b23.3	93	52.341	Tetraodon_nigroviridis
ENSLACG00000005800	-	99	57.467	ENSXMAG00000029318	si:ch211-153b23.3	94	57.914	Xiphophorus_maculatus
ENSLACG00000005800	-	79	30.448	ENSXMAG00000009416	-	76	30.149	Xiphophorus_maculatus
ENSLACG00000005800	-	79	30.299	ENSXMAG00000021388	si:ch211-153b23.4	77	30.299	Xiphophorus_maculatus