EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005809 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 45160 bases
Position: chrJH128504.1:186529-231688
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006553	RRM_1	PF00076.22	5e-27	1	2
ENSLACP00000006553	RRM_1	PF00076.22	5e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006606	-	2105	-	ENSLACP00000006553	683 (aa)	-	H3AA82

Gene Model

Click here to download ENSLACG00000005809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005809's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005809	-	98	38.010	ENSLACG00000005188	RAVER2	100	37.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005809	-	99	62.108	ENSG00000161847	RAVER1	90	61.341	Homo_sapiens
ENSLACG00000005809	-	79	58.105	ENSAPOG00000017267	raver1	78	49.138	Acanthochromis_polyacanthus
ENSLACG00000005809	-	99	61.396	ENSAMEG00000011738	RAVER1	88	61.714	Ailuropoda_melanoleuca
ENSLACG00000005809	-	79	60.256	ENSAOCG00000005128	raver1	82	49.499	Amphiprion_ocellaris
ENSLACG00000005809	-	76	84.615	ENSAPEG00000010854	raver1	74	84.615	Amphiprion_percula
ENSLACG00000005809	-	82	59.406	ENSATEG00000021004	raver1	73	59.406	Anabas_testudineus
ENSLACG00000005809	-	89	62.360	ENSACAG00000008386	-	85	61.699	Anolis_carolinensis
ENSLACG00000005809	-	99	60.171	ENSANAG00000028226	RAVER1	88	60.689	Aotus_nancymaae
ENSLACG00000005809	-	74	91.111	ENSACLG00000018492	raver1	68	91.111	Astatotilapia_calliptera
ENSLACG00000005809	-	80	81.667	ENSAMXG00000005132	raver1	88	49.644	Astyanax_mexicanus
ENSLACG00000005809	-	77	88.679	ENSBTAG00000015721	RAVER1	86	76.061	Bos_taurus
ENSLACG00000005809	-	99	60.028	ENSCJAG00000005671	RAVER1	88	60.258	Callithrix_jacchus
ENSLACG00000005809	-	99	59.829	ENSCAFG00000017861	RAVER1	88	60.694	Canis_familiaris
ENSLACG00000005809	-	99	59.829	ENSCAFG00020024449	RAVER1	90	60.694	Canis_lupus_dingo
ENSLACG00000005809	-	99	59.626	ENSCHIG00000006718	RAVER1	90	60.315	Capra_hircus
ENSLACG00000005809	-	65	69.900	ENSTSYG00000027107	RAVER1	85	70.380	Carlito_syrichta
ENSLACG00000005809	-	89	70.248	ENSCAPG00000002269	RAVER1	100	58.849	Cavia_aperea
ENSLACG00000005809	-	99	58.680	ENSCPOG00000001008	RAVER1	90	59.143	Cavia_porcellus
ENSLACG00000005809	-	99	59.886	ENSCCAG00000031723	RAVER1	88	60.545	Cebus_capucinus
ENSLACG00000005809	-	99	61.966	ENSCATG00000043863	RAVER1	88	61.484	Cercocebus_atys
ENSLACG00000005809	-	99	60.658	ENSCLAG00000009336	RAVER1	90	60.689	Chinchilla_lanigera
ENSLACG00000005809	-	99	61.966	ENSCSAG00000007317	RAVER1	75	61.484	Chlorocebus_sabaeus
ENSLACG00000005809	-	99	60.858	ENSCPBG00000005349	-	91	60.465	Chrysemys_picta_bellii
ENSLACG00000005809	-	99	61.966	ENSCANG00000008337	RAVER1	88	61.484	Colobus_angolensis_palliatus
ENSLACG00000005809	-	99	61.549	ENSCGRG00001013260	-	90	60.976	Cricetulus_griseus_chok1gshd
ENSLACG00000005809	-	99	61.549	ENSCGRG00000015138	-	90	60.976	Cricetulus_griseus_crigri
ENSLACG00000005809	-	75	84.615	ENSCSEG00000021092	raver1	69	84.615	Cynoglossus_semilaevis
ENSLACG00000005809	-	99	49.857	ENSCVAG00000013971	raver1	75	61.386	Cyprinodon_variegatus
ENSLACG00000005809	-	80	64.045	ENSDARG00000052617	raver1	86	49.713	Danio_rerio
ENSLACG00000005809	-	54	76.238	ENSDNOG00000035742	-	60	64.217	Dasypus_novemcinctus
ENSLACG00000005809	-	99	55.230	ENSDORG00000010106	-	90	54.278	Dipodomys_ordii
ENSLACG00000005809	-	67	60.317	ENSETEG00000008201	-	69	78.212	Echinops_telfairi
ENSLACG00000005809	-	58	74.855	ENSEASG00005010544	-	77	74.855	Equus_asinus_asinus
ENSLACG00000005809	-	99	61.263	ENSECAG00000024966	RAVER1	88	61.286	Equus_caballus
ENSLACG00000005809	-	99	50.943	ENSELUG00000023287	raver1	85	50.653	Esox_lucius
ENSLACG00000005809	-	99	61.254	ENSFCAG00000009435	RAVER1	88	61.714	Felis_catus
ENSLACG00000005809	-	99	60.920	ENSFDAG00000015113	RAVER1	90	59.914	Fukomys_damarensis
ENSLACG00000005809	-	99	50.285	ENSGMOG00000003649	raver1	90	50.000	Gadus_morhua
ENSLACG00000005809	-	99	49.286	ENSGAFG00000015944	raver1	85	48.649	Gambusia_affinis
ENSLACG00000005809	-	99	48.936	ENSGACG00000013818	raver1	91	48.373	Gasterosteus_aculeatus
ENSLACG00000005809	-	84	81.818	ENSGAGG00000011748	-	89	81.818	Gopherus_agassizii
ENSLACG00000005809	-	99	61.823	ENSGGOG00000006015	RAVER1	88	61.341	Gorilla_gorilla
ENSLACG00000005809	-	75	86.275	ENSHBUG00000021210	raver1	85	49.502	Haplochromis_burtoni
ENSLACG00000005809	-	99	59.514	ENSHGLG00000015460	RAVER1	90	59.510	Heterocephalus_glaber_female
ENSLACG00000005809	-	99	59.514	ENSHGLG00100000812	RAVER1	90	59.510	Heterocephalus_glaber_male
ENSLACG00000005809	-	80	63.855	ENSHCOG00000000449	raver1	83	50.363	Hippocampus_comes
ENSLACG00000005809	-	99	51.793	ENSIPUG00000013153	raver1	85	51.724	Ictalurus_punctatus
ENSLACG00000005809	-	99	60.658	ENSSTOG00000003241	RAVER1	90	60.086	Ictidomys_tridecemlineatus
ENSLACG00000005809	-	99	61.254	ENSJJAG00000018219	-	90	60.770	Jaculus_jaculus
ENSLACG00000005809	-	99	49.292	ENSKMAG00000017355	raver1	85	49.150	Kryptolebias_marmoratus
ENSLACG00000005809	-	68	58.386	ENSLBEG00000008268	raver1	62	57.872	Labrus_bergylta
ENSLACG00000005809	-	99	57.349	ENSLOCG00000007500	raver1	87	56.999	Lepisosteus_oculatus
ENSLACG00000005809	-	99	61.373	ENSLAFG00000003664	-	89	72.500	Loxodonta_africana
ENSLACG00000005809	-	99	61.823	ENSMFAG00000037977	RAVER1	88	61.341	Macaca_fascicularis
ENSLACG00000005809	-	99	61.966	ENSMMUG00000014897	RAVER1	88	61.484	Macaca_mulatta
ENSLACG00000005809	-	99	61.966	ENSMNEG00000028390	RAVER1	88	61.484	Macaca_nemestrina
ENSLACG00000005809	-	99	61.681	ENSMLEG00000041959	RAVER1	88	61.198	Mandrillus_leucophaeus
ENSLACG00000005809	-	76	81.132	ENSMAMG00000012059	raver1	85	49.432	Mastacembelus_armatus
ENSLACG00000005809	-	74	91.111	ENSMZEG00005019002	raver1	68	91.111	Maylandia_zebra
ENSLACG00000005809	-	99	60.826	ENSMAUG00000017948	-	90	60.714	Mesocricetus_auratus
ENSLACG00000005809	-	99	60.057	ENSMICG00000010326	RAVER1	90	59.800	Microcebus_murinus
ENSLACG00000005809	-	99	61.406	ENSMOCG00000015553	-	90	60.976	Microtus_ochrogaster
ENSLACG00000005809	-	99	50.215	ENSMMOG00000012093	raver1	85	49.643	Mola_mola
ENSLACG00000005809	-	96	60.181	ENSMODG00000005584	-	78	58.939	Monodelphis_domestica
ENSLACG00000005809	-	99	49.858	ENSMALG00000016569	raver1	85	49.433	Monopterus_albus
ENSLACG00000005809	-	99	60.913	MGP_CAROLIEiJ_G0031860	-	90	60.342	Mus_caroli
ENSLACG00000005809	-	99	60.340	ENSMUSG00000010205	Raver1	90	60.000	Mus_musculus
ENSLACG00000005809	-	99	60.000	MGP_PahariEiJ_G0014726	-	90	60.284	Mus_pahari
ENSLACG00000005809	-	99	60.198	MGP_SPRETEiJ_G0032984	-	90	59.858	Mus_spretus
ENSLACG00000005809	-	99	62.751	ENSMPUG00000006712	RAVER1	88	62.286	Mustela_putorius_furo
ENSLACG00000005809	-	99	59.254	ENSMLUG00000012328	RAVER1	90	60.610	Myotis_lucifugus
ENSLACG00000005809	-	99	60.029	ENSNGAG00000001260	-	90	59.344	Nannospalax_galili
ENSLACG00000005809	-	80	62.500	ENSNBRG00000010139	raver1	85	43.989	Neolamprologus_brichardi
ENSLACG00000005809	-	99	61.681	ENSNLEG00000012181	RAVER1	88	61.484	Nomascus_leucogenys
ENSLACG00000005809	-	99	59.855	ENSMEUG00000003281	-	100	59.302	Notamacropus_eugenii
ENSLACG00000005809	-	99	59.654	ENSODEG00000016260	RAVER1	90	60.115	Octodon_degus
ENSLACG00000005809	-	79	61.250	ENSONIG00000001559	raver1	93	49.282	Oreochromis_niloticus
ENSLACG00000005809	-	99	57.266	ENSOCUG00000020918	RAVER1	90	56.484	Oryctolagus_cuniculus
ENSLACG00000005809	-	99	49.498	ENSORLG00000005458	raver1	71	60.190	Oryzias_latipes
ENSLACG00000005809	-	99	49.928	ENSORLG00020004392	raver1	71	60.664	Oryzias_latipes_hni
ENSLACG00000005809	-	99	49.928	ENSORLG00015017222	raver1	85	48.378	Oryzias_latipes_hsok
ENSLACG00000005809	-	75	85.714	ENSOMEG00000023956	raver1	72	85.714	Oryzias_melastigma
ENSLACG00000005809	-	99	60.938	ENSOGAG00000011071	RAVER1	88	60.628	Otolemur_garnettii
ENSLACG00000005809	-	99	58.069	ENSOARG00000015886	RAVER1	88	57.902	Ovis_aries
ENSLACG00000005809	-	99	61.823	ENSPPAG00000002611	RAVER1	88	61.341	Pan_paniscus
ENSLACG00000005809	-	99	61.396	ENSPPRG00000009912	RAVER1	88	61.571	Panthera_pardus
ENSLACG00000005809	-	99	61.823	ENSPTRG00000010466	RAVER1	88	61.341	Pan_troglodytes
ENSLACG00000005809	-	99	61.966	ENSPANG00000004122	RAVER1	88	61.484	Papio_anubis
ENSLACG00000005809	-	99	60.602	ENSPEMG00000016411	-	90	60.458	Peromyscus_maniculatus_bairdii
ENSLACG00000005809	-	99	60.787	ENSPCIG00000018695	-	90	59.827	Phascolarctos_cinereus
ENSLACG00000005809	-	99	49.362	ENSPFOG00000007016	raver1	85	49.501	Poecilia_formosa
ENSLACG00000005809	-	81	56.842	ENSPLAG00000020793	raver1	85	48.867	Poecilia_latipinna
ENSLACG00000005809	-	99	50.432	ENSPMEG00000011220	raver1	85	49.640	Poecilia_mexicana
ENSLACG00000005809	-	74	93.023	ENSPREG00000006864	raver1	84	46.667	Poecilia_reticulata
ENSLACG00000005809	-	99	61.484	ENSPPYG00000010514	RAVER1	75	61.341	Pongo_abelii
ENSLACG00000005809	-	99	61.263	ENSPCOG00000026605	RAVER1	88	61.000	Propithecus_coquereli
ENSLACG00000005809	-	99	61.007	ENSPVAG00000003689	RAVER1	90	60.801	Pteropus_vampyrus
ENSLACG00000005809	-	69	86.275	ENSPNYG00000013284	raver1	65	86.275	Pundamilia_nyererei
ENSLACG00000005809	-	99	50.568	ENSPNAG00000015476	raver1	74	60.000	Pygocentrus_nattereri
ENSLACG00000005809	-	99	60.907	ENSRNOG00000020710	Raver1	90	60.628	Rattus_norvegicus
ENSLACG00000005809	-	99	61.966	ENSRBIG00000034702	RAVER1	88	61.484	Rhinopithecus_bieti
ENSLACG00000005809	-	99	60.969	ENSRROG00000031186	RAVER1	88	60.342	Rhinopithecus_roxellana
ENSLACG00000005809	-	99	59.456	ENSSBOG00000023423	RAVER1	88	58.916	Saimiri_boliviensis_boliviensis
ENSLACG00000005809	-	99	60.781	ENSSHAG00000008181	-	90	60.145	Sarcophilus_harrisii
ENSLACG00000005809	-	80	62.651	ENSSMAG00000004546	raver1	85	50.072	Scophthalmus_maximus
ENSLACG00000005809	-	88	54.400	ENSSDUG00000021063	raver1	84	55.711	Seriola_dumerili
ENSLACG00000005809	-	80	60.920	ENSSLDG00000014505	raver1	85	51.351	Seriola_lalandi_dorsalis
ENSLACG00000005809	-	99	46.573	ENSSPAG00000000688	raver1	85	50.429	Stegastes_partitus
ENSLACG00000005809	-	79	88.679	ENSSSCG00000013650	-	90	59.857	Sus_scrofa
ENSLACG00000005809	-	81	59.804	ENSTRUG00000025641	raver1	60	65.642	Takifugu_rubripes
ENSLACG00000005809	-	99	59.971	ENSTTRG00000009552	RAVER1	90	60.458	Tursiops_truncatus
ENSLACG00000005809	-	99	61.396	ENSUAMG00000020385	RAVER1	88	61.714	Ursus_americanus
ENSLACG00000005809	-	99	59.402	ENSVVUG00000028976	RAVER1	88	60.694	Vulpes_vulpes
ENSLACG00000005809	-	87	71.910	ENSXETG00000011622	raver1	81	71.910	Xenopus_tropicalis
ENSLACG00000005809	-	99	49.424	ENSXCOG00000016368	raver1	85	48.559	Xiphophorus_couchianus
ENSLACG00000005809	-	99	49.356	ENSXMAG00000000217	raver1	85	48.498	Xiphophorus_maculatus