EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005874 (Gene tree)
Gene ID: 102346874
Gene Symbol: SRSF5
Alias: HRS|SFRS5|SRP40
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 30316 bases
Position: chrJH126639.1:188389-218704
Accession: 102346874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000021824	RRM_1	PF00076.22	5e-32	1	2
ENSLACP00000021824	RRM_1	PF00076.22	5e-32	2	2
ENSLACP00000006623	RRM_1	PF00076.22	1.3e-31	1	2
ENSLACP00000006623	RRM_1	PF00076.22	1.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006677	SRSF5-202	1116	-	ENSLACP00000006623	367 (aa)	-	H3AAF2
ENSLACT00000025539	SRSF5-201	1654	XM_005990768	ENSLACP00000021824	270 (aa)	XP_005990830	M3XGG8

Gene Model

Click here to download ENSLACG00000005874's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG
lcm05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005874	SRSF5	98	53.488	ENSLACG00000005466	SRSF6	53	66.854
ENSLACG00000005874	SRSF5	67	72.376	ENSLACG00000017874	-	69	74.586
ENSLACG00000005874	SRSF5	69	41.361	ENSLACG00000018228	SRSF9	73	42.308
ENSLACG00000005874	SRSF5	75	45.327	ENSLACG00000014160	srsf1a	76	45.283

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005874	SRSF5	67	90.608	ENSG00000100650	SRSF5	100	85.149	Homo_sapiens
ENSLACG00000005874	SRSF5	68	84.043	ENSAPOG00000008642	srsf5b	63	85.870	Acanthochromis_polyacanthus
ENSLACG00000005874	SRSF5	67	90.608	ENSAMEG00000014574	SRSF5	100	85.036	Ailuropoda_melanoleuca
ENSLACG00000005874	SRSF5	68	83.598	ENSACIG00000010742	srsf5b	81	79.845	Amphilophus_citrinellus
ENSLACG00000005874	SRSF5	68	84.043	ENSAOCG00000005719	srsf5b	63	85.870	Amphiprion_ocellaris
ENSLACG00000005874	SRSF5	68	84.043	ENSAPEG00000007830	srsf5b	63	85.870	Amphiprion_percula
ENSLACG00000005874	SRSF5	99	65.934	ENSATEG00000019112	srsf5b	63	83.784	Anabas_testudineus
ENSLACG00000005874	SRSF5	73	79.926	ENSAPLG00000014681	SRSF5	65	90.341	Anas_platyrhynchos
ENSLACG00000005874	SRSF5	67	90.608	ENSACAG00000005143	SRSF5	67	90.055	Anolis_carolinensis
ENSLACG00000005874	SRSF5	67	90.608	ENSANAG00000027977	-	100	85.149	Aotus_nancymaae
ENSLACG00000005874	SRSF5	91	74.131	ENSACLG00000026424	srsf5b	63	84.783	Astatotilapia_calliptera
ENSLACG00000005874	SRSF5	90	73.541	ENSAMXG00000011932	srsf5b	84	83.200	Astyanax_mexicanus
ENSLACG00000005874	SRSF5	67	90.608	ENSBTAG00000011596	SRSF5	100	85.036	Bos_taurus
ENSLACG00000005874	SRSF5	67	90.608	ENSCJAG00000014884	SRSF5	100	85.149	Callithrix_jacchus
ENSLACG00000005874	SRSF5	67	90.608	ENSCAFG00000016589	SRSF5	100	85.036	Canis_familiaris
ENSLACG00000005874	SRSF5	67	90.608	ENSCAFG00020005661	SRSF5	100	85.036	Canis_lupus_dingo
ENSLACG00000005874	SRSF5	67	90.608	ENSCHIG00000016794	SRSF5	65	90.055	Capra_hircus
ENSLACG00000005874	SRSF5	67	90.608	ENSTSYG00000007786	SRSF5	100	85.149	Carlito_syrichta
ENSLACG00000005874	SRSF5	67	90.608	ENSCAPG00000008801	SRSF5	65	90.055	Cavia_aperea
ENSLACG00000005874	SRSF5	67	90.608	ENSCPOG00000039926	SRSF5	65	90.055	Cavia_porcellus
ENSLACG00000005874	SRSF5	67	90.608	ENSCCAG00000029002	SRSF5	100	85.149	Cebus_capucinus
ENSLACG00000005874	SRSF5	67	90.608	ENSCATG00000045051	SRSF5	100	85.149	Cercocebus_atys
ENSLACG00000005874	SRSF5	67	90.608	ENSCLAG00000004755	SRSF5	100	85.294	Chinchilla_lanigera
ENSLACG00000005874	SRSF5	67	90.608	ENSCSAG00000013041	SRSF5	66	90.055	Chlorocebus_sabaeus
ENSLACG00000005874	SRSF5	67	91.160	ENSCPBG00000021653	SRSF5	67	90.608	Chrysemys_picta_bellii
ENSLACG00000005874	SRSF5	67	90.608	ENSCANG00000030560	SRSF5	100	85.149	Colobus_angolensis_palliatus
ENSLACG00000005874	SRSF5	67	90.608	ENSCGRG00001015339	Srsf5	89	84.711	Cricetulus_griseus_chok1gshd
ENSLACG00000005874	SRSF5	67	90.608	ENSCGRG00000009833	Srsf5	89	84.711	Cricetulus_griseus_crigri
ENSLACG00000005874	SRSF5	96	71.795	ENSCSEG00000003801	srsf5b	64	83.333	Cynoglossus_semilaevis
ENSLACG00000005874	SRSF5	68	82.979	ENSCVAG00000017240	srsf5b	64	83.575	Cyprinodon_variegatus
ENSLACG00000005874	SRSF5	67	84.615	ENSDARG00000027734	srsf5b	90	82.400	Danio_rerio
ENSLACG00000005874	SRSF5	67	90.608	ENSDNOG00000006160	SRSF5	67	90.055	Dasypus_novemcinctus
ENSLACG00000005874	SRSF5	67	90.608	ENSDORG00000003989	Srsf5	89	85.537	Dipodomys_ordii
ENSLACG00000005874	SRSF5	67	86.188	ENSETEG00000020396	SRSF5	66	83.978	Echinops_telfairi
ENSLACG00000005874	SRSF5	68	65.241	ENSEBUG00000006229	srsf5b	68	65.027	Eptatretus_burgeri
ENSLACG00000005874	SRSF5	67	90.608	ENSEASG00005016615	SRSF5	100	85.036	Equus_asinus_asinus
ENSLACG00000005874	SRSF5	67	90.608	ENSECAG00000026873	SRSF5	90	84.921	Equus_caballus
ENSLACG00000005874	SRSF5	68	83.077	ENSELUG00000019852	srsf5b	85	71.528	Esox_lucius
ENSLACG00000005874	SRSF5	67	90.608	ENSFCAG00000008848	SRSF5	100	85.036	Felis_catus
ENSLACG00000005874	SRSF5	67	90.608	ENSFALG00000004979	SRSF5	67	88.398	Ficedula_albicollis
ENSLACG00000005874	SRSF5	67	90.608	ENSFDAG00000011562	SRSF5	90	85.537	Fukomys_damarensis
ENSLACG00000005874	SRSF5	68	84.043	ENSFHEG00000009476	srsf5b	60	85.326	Fundulus_heteroclitus
ENSLACG00000005874	SRSF5	68	69.027	ENSGMOG00000000595	srsf5b	97	68.468	Gadus_morhua
ENSLACG00000005874	SRSF5	67	91.160	ENSGALG00000009421	SRSF5	90	82.540	Gallus_gallus
ENSLACG00000005874	SRSF5	92	75.379	ENSGAFG00000002865	srsf5b	61	84.239	Gambusia_affinis
ENSLACG00000005874	SRSF5	67	60.816	ENSGACG00000007834	srsf5b	86	71.324	Gasterosteus_aculeatus
ENSLACG00000005874	SRSF5	67	91.160	ENSGAGG00000004447	SRSF5	67	90.608	Gopherus_agassizii
ENSLACG00000005874	SRSF5	67	90.608	ENSGGOG00000016462	SRSF5	100	85.149	Gorilla_gorilla
ENSLACG00000005874	SRSF5	68	82.979	ENSHBUG00000012462	srsf5b	93	78.906	Haplochromis_burtoni
ENSLACG00000005874	SRSF5	67	91.160	ENSHGLG00000010147	SRSF5	66	90.608	Heterocephalus_glaber_female
ENSLACG00000005874	SRSF5	67	91.160	ENSHGLG00100015328	SRSF5	66	90.608	Heterocephalus_glaber_male
ENSLACG00000005874	SRSF5	96	55.769	ENSHGLG00100000095	-	65	60.733	Heterocephalus_glaber_male
ENSLACG00000005874	SRSF5	68	77.083	ENSHCOG00000005592	srsf5b	64	78.723	Hippocampus_comes
ENSLACG00000005874	SRSF5	67	90.608	ENSSTOG00000020672	SRSF5	66	90.055	Ictidomys_tridecemlineatus
ENSLACG00000005874	SRSF5	67	90.608	ENSJJAG00000001688	Srsf5	100	85.401	Jaculus_jaculus
ENSLACG00000005874	SRSF5	68	85.561	ENSKMAG00000020486	srsf5b	84	82.677	Kryptolebias_marmoratus
ENSLACG00000005874	SRSF5	68	82.105	ENSLBEG00000013647	srsf5b	63	83.333	Labrus_bergylta
ENSLACG00000005874	SRSF5	97	74.532	ENSLOCG00000012438	srsf5b	69	83.333	Lepisosteus_oculatus
ENSLACG00000005874	SRSF5	67	90.055	ENSLAFG00000005260	SRSF5	66	89.503	Loxodonta_africana
ENSLACG00000005874	SRSF5	67	90.608	ENSMFAG00000002393	SRSF5	100	85.149	Macaca_fascicularis
ENSLACG00000005874	SRSF5	67	90.608	ENSMNEG00000030872	SRSF5	100	85.149	Macaca_nemestrina
ENSLACG00000005874	SRSF5	67	90.608	ENSMLEG00000030017	SRSF5	100	85.149	Mandrillus_leucophaeus
ENSLACG00000005874	SRSF5	87	76.305	ENSMAMG00000002673	srsf5b	63	84.783	Mastacembelus_armatus
ENSLACG00000005874	SRSF5	91	74.131	ENSMZEG00005003550	srsf5b	63	84.783	Maylandia_zebra
ENSLACG00000005874	SRSF5	74	88.557	ENSMGAG00000011835	SRSF5	62	86.620	Meleagris_gallopavo
ENSLACG00000005874	SRSF5	67	90.608	ENSMAUG00000009544	Srsf5	66	90.055	Mesocricetus_auratus
ENSLACG00000005874	SRSF5	67	90.608	ENSMICG00000037432	-	100	85.149	Microcebus_murinus
ENSLACG00000005874	SRSF5	67	90.608	ENSMOCG00000013134	Srsf5	89	86.420	Microtus_ochrogaster
ENSLACG00000005874	SRSF5	67	83.243	ENSMMOG00000000137	srsf5b	93	64.615	Mola_mola
ENSLACG00000005874	SRSF5	67	91.160	ENSMODG00000011362	SRSF5	67	90.608	Monodelphis_domestica
ENSLACG00000005874	SRSF5	68	83.069	ENSMALG00000021875	srsf5b	84	79.070	Monopterus_albus
ENSLACG00000005874	SRSF5	67	90.608	ENSMUSG00000021134	Srsf5	98	88.889	Mus_musculus
ENSLACG00000005874	SRSF5	67	90.608	MGP_PahariEiJ_G0029659	Srsf5	89	84.711	Mus_pahari
ENSLACG00000005874	SRSF5	67	90.608	ENSMPUG00000007458	SRSF5	100	85.036	Mustela_putorius_furo
ENSLACG00000005874	SRSF5	67	90.608	ENSMLUG00000011939	SRSF5	64	90.055	Myotis_lucifugus
ENSLACG00000005874	SRSF5	67	90.608	ENSNGAG00000010073	-	66	90.055	Nannospalax_galili
ENSLACG00000005874	SRSF5	68	82.632	ENSNBRG00000001285	srsf5b	63	83.871	Neolamprologus_brichardi
ENSLACG00000005874	SRSF5	67	90.608	ENSNLEG00000001615	SRSF5	100	85.149	Nomascus_leucogenys
ENSLACG00000005874	SRSF5	67	90.608	ENSOPRG00000008286	SRSF5	64	90.055	Ochotona_princeps
ENSLACG00000005874	SRSF5	67	90.608	ENSODEG00000013469	-	67	90.055	Octodon_degus
ENSLACG00000005874	SRSF5	67	88.398	ENSODEG00000000700	-	68	87.845	Octodon_degus
ENSLACG00000005874	SRSF5	91	74.131	ENSONIG00000005759	srsf5b	63	84.783	Oreochromis_niloticus
ENSLACG00000005874	SRSF5	67	86.188	ENSOANG00000013336	SRSF5	99	77.617	Ornithorhynchus_anatinus
ENSLACG00000005874	SRSF5	67	90.608	ENSOCUG00000009274	SRSF5	87	86.420	Oryctolagus_cuniculus
ENSLACG00000005874	SRSF5	69	80.412	ENSORLG00000029854	srsf5b	58	80.526	Oryzias_latipes
ENSLACG00000005874	SRSF5	91	73.106	ENSORLG00015001720	srsf5b	63	81.183	Oryzias_latipes_hsok
ENSLACG00000005874	SRSF5	67	90.608	ENSOGAG00000015122	SRSF5	66	90.055	Otolemur_garnettii
ENSLACG00000005874	SRSF5	67	90.608	ENSPPAG00000029921	SRSF5	100	85.149	Pan_paniscus
ENSLACG00000005874	SRSF5	67	90.608	ENSPPRG00000012903	SRSF5	100	85.036	Panthera_pardus
ENSLACG00000005874	SRSF5	67	90.608	ENSPTIG00000018589	SRSF5	100	85.036	Panthera_tigris_altaica
ENSLACG00000005874	SRSF5	67	90.608	ENSPTRG00000006488	SRSF5	100	85.149	Pan_troglodytes
ENSLACG00000005874	SRSF5	67	90.608	ENSPANG00000021091	SRSF5	100	85.149	Papio_anubis
ENSLACG00000005874	SRSF5	67	91.160	ENSPSIG00000012522	SRSF5	90	87.137	Pelodiscus_sinensis
ENSLACG00000005874	SRSF5	67	90.608	ENSPEMG00000020173	Srsf5	89	84.711	Peromyscus_maniculatus_bairdii
ENSLACG00000005874	SRSF5	99	50.662	ENSPMAG00000007790	srsf5b	67	61.658	Petromyzon_marinus
ENSLACG00000005874	SRSF5	67	91.160	ENSPCIG00000011877	SRSF5	67	90.608	Phascolarctos_cinereus
ENSLACG00000005874	SRSF5	92	74.340	ENSPFOG00000017700	srsf5b	61	85.326	Poecilia_formosa
ENSLACG00000005874	SRSF5	92	74.812	ENSPLAG00000006480	srsf5b	61	84.865	Poecilia_latipinna
ENSLACG00000005874	SRSF5	92	74.340	ENSPMEG00000012751	srsf5b	84	78.906	Poecilia_mexicana
ENSLACG00000005874	SRSF5	92	75.379	ENSPREG00000010381	srsf5b	61	84.783	Poecilia_reticulata
ENSLACG00000005874	SRSF5	67	90.608	ENSPPYG00000005945	SRSF5	66	90.055	Pongo_abelii
ENSLACG00000005874	SRSF5	55	89.865	ENSPCAG00000004405	SRSF5	100	87.838	Procavia_capensis
ENSLACG00000005874	SRSF5	67	90.608	ENSPCOG00000014442	SRSF5	90	84.921	Propithecus_coquereli
ENSLACG00000005874	SRSF5	91	69.444	ENSPNYG00000002669	srsf5b	94	78.125	Pundamilia_nyererei
ENSLACG00000005874	SRSF5	69	84.409	ENSPNAG00000011262	srsf5b	84	82.400	Pygocentrus_nattereri
ENSLACG00000005874	SRSF5	67	90.608	ENSRNOG00000005513	Srsf5	89	84.711	Rattus_norvegicus
ENSLACG00000005874	SRSF5	67	90.608	ENSRBIG00000013003	SRSF5	100	85.149	Rhinopithecus_bieti
ENSLACG00000005874	SRSF5	67	90.608	ENSRROG00000043407	SRSF5	100	85.149	Rhinopithecus_roxellana
ENSLACG00000005874	SRSF5	67	90.608	ENSSBOG00000030784	SRSF5	100	85.149	Saimiri_boliviensis_boliviensis
ENSLACG00000005874	SRSF5	67	91.160	ENSSHAG00000002871	SRSF5	67	90.608	Sarcophilus_harrisii
ENSLACG00000005874	SRSF5	68	79.104	ENSSMAG00000019728	srsf5b	61	79.695	Scophthalmus_maximus
ENSLACG00000005874	SRSF5	96	73.801	ENSSDUG00000005766	srsf5b	65	84.865	Seriola_dumerili
ENSLACG00000005874	SRSF5	91	76.154	ENSSLDG00000023255	srsf5b	84	78.125	Seriola_lalandi_dorsalis
ENSLACG00000005874	SRSF5	67	77.901	ENSSARG00000001059	SRSF5	66	77.348	Sorex_araneus
ENSLACG00000005874	SRSF5	67	86.842	ENSSPUG00000002464	SRSF5	90	79.259	Sphenodon_punctatus
ENSLACG00000005874	SRSF5	90	75.391	ENSSPAG00000015325	srsf5b	63	85.326	Stegastes_partitus
ENSLACG00000005874	SRSF5	67	90.608	ENSSSCG00000032583	SRSF5	100	85.036	Sus_scrofa
ENSLACG00000005874	SRSF5	67	90.608	ENSTGUG00000011425	SRSF5	67	88.398	Taeniopygia_guttata
ENSLACG00000005874	SRSF5	68	83.333	ENSTRUG00000017811	srsf5b	59	84.153	Takifugu_rubripes
ENSLACG00000005874	SRSF5	68	82.796	ENSTNIG00000016411	srsf5b	66	83.607	Tetraodon_nigroviridis
ENSLACG00000005874	SRSF5	67	88.398	ENSTBEG00000001972	SRSF5	65	86.740	Tupaia_belangeri
ENSLACG00000005874	SRSF5	67	90.556	ENSTTRG00000003318	SRSF5	65	90.000	Tursiops_truncatus
ENSLACG00000005874	SRSF5	67	90.608	ENSUAMG00000014184	SRSF5	100	85.036	Ursus_americanus
ENSLACG00000005874	SRSF5	70	90.604	ENSUMAG00000009827	SRSF5	100	84.615	Ursus_maritimus
ENSLACG00000005874	SRSF5	67	90.608	ENSVPAG00000006448	SRSF5	66	90.055	Vicugna_pacos
ENSLACG00000005874	SRSF5	67	90.608	ENSVVUG00000003790	SRSF5	100	85.036	Vulpes_vulpes
ENSLACG00000005874	SRSF5	93	78.077	ENSXETG00000002211	srsf5	67	90.110	Xenopus_tropicalis
ENSLACG00000005874	SRSF5	92	71.094	ENSXCOG00000001570	srsf5b	92	68.401	Xiphophorus_couchianus
ENSLACG00000005874	SRSF5	92	75.094	ENSXMAG00000026416	srsf5b	84	79.845	Xiphophorus_maculatus