EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005904 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1284 bases
Position: chrJH128180.1:191076-192359
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006656	RVT_1	PF00078.27	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006710	-	849	-	ENSLACP00000006656	283 (aa)	-	H3AAI5

Gene Model

Click here to download ENSLACG00000005904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005904	-	76	31.163	ENSLACG00000016284	-	63	32.061
ENSLACG00000005904	-	58	35.542	ENSLACG00000016475	-	92	35.542
ENSLACG00000005904	-	58	34.706	ENSLACG00000000981	-	72	34.706
ENSLACG00000005904	-	73	31.884	ENSLACG00000010373	-	79	31.884
ENSLACG00000005904	-	67	69.792	ENSLACG00000011328	-	83	69.792
ENSLACG00000005904	-	53	38.411	ENSLACG00000002617	-	86	38.411
ENSLACG00000005904	-	51	30.612	ENSLACG00000014604	-	73	30.612
ENSLACG00000005904	-	52	32.432	ENSLACG00000010227	-	55	32.432
ENSLACG00000005904	-	78	32.895	ENSLACG00000004732	-	64	32.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005904	-	81	37.719	ENSAPOG00000011439	-	65	37.719	Acanthochromis_polyacanthus
ENSLACG00000005904	-	78	37.727	ENSACLG00000009390	-	62	36.437	Astatotilapia_calliptera
ENSLACG00000005904	-	78	32.432	ENSACLG00000002678	-	50	32.432	Astatotilapia_calliptera
ENSLACG00000005904	-	63	35.955	ENSEBUG00000007520	-	70	35.955	Eptatretus_burgeri
ENSLACG00000005904	-	73	33.816	ENSIPUG00000002895	-	50	32.287	Ictalurus_punctatus
ENSLACG00000005904	-	85	34.156	ENSPSIG00000000968	-	72	34.156	Pelodiscus_sinensis
ENSLACG00000005904	-	77	33.486	ENSPNYG00000002366	-	66	33.486	Pundamilia_nyererei
ENSLACG00000005904	-	77	39.171	ENSXMAG00000024510	-	57	39.171	Xiphophorus_maculatus