EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000005928 (Gene tree)
Gene ID: 102367670
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 113509 bases
Position: chrJH126734.1:192268-305776
Accession: 102367670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006685	Exo_endo_phos	PF03372.23	4.2e-16	1	1
ENSLACP00000006685	DUF1866	PF08952.11	2.5e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006739	SYNJ1-201	4692	XM_005993617	ENSLACP00000006685	1563 (aa)	-	H3AAL4

Gene Model

Click here to download ENSLACG00000005928's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm00562	Inositol phosphate metabolism	KEGG
lcm01100	Metabolic pathways	KEGG
lcm04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000005928	SYNJ1	63	57.172	ENSLACG00000007316	SYNJ2	91	57.100

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005928	SYNJ1	98	69.736	ENSG00000159082	SYNJ1	100	87.640	Homo_sapiens
ENSLACG00000005928	SYNJ1	70	76.449	ENSAPOG00000002809	synj1	99	67.625	Acanthochromis_polyacanthus
ENSLACG00000005928	SYNJ1	98	69.800	ENSAMEG00000015028	SYNJ1	98	68.461	Ailuropoda_melanoleuca
ENSLACG00000005928	SYNJ1	71	73.909	ENSACIG00000008857	synj1	95	62.203	Amphilophus_citrinellus
ENSLACG00000005928	SYNJ1	70	76.087	ENSAOCG00000009835	synj1	92	75.747	Amphiprion_ocellaris
ENSLACG00000005928	SYNJ1	70	75.815	ENSAPEG00000021010	synj1	92	75.475	Amphiprion_percula
ENSLACG00000005928	SYNJ1	71	75.426	ENSATEG00000002306	synj1	95	63.949	Anabas_testudineus
ENSLACG00000005928	SYNJ1	99	68.032	ENSAPLG00000011832	SYNJ1	100	68.346	Anas_platyrhynchos
ENSLACG00000005928	SYNJ1	84	76.212	ENSACAG00000003006	-	99	76.212	Anolis_carolinensis
ENSLACG00000005928	SYNJ1	98	69.350	ENSANAG00000027325	SYNJ1	99	76.212	Aotus_nancymaae
ENSLACG00000005928	SYNJ1	74	75.713	ENSACLG00000002255	synj1	99	68.233	Astatotilapia_calliptera
ENSLACG00000005928	SYNJ1	68	77.746	ENSAMXG00000008208	synj1	68	76.349	Astyanax_mexicanus
ENSLACG00000005928	SYNJ1	96	71.306	ENSBTAG00000003063	SYNJ1	99	76.399	Bos_taurus
ENSLACG00000005928	SYNJ1	98	69.652	ENSCJAG00000009187	SYNJ1	99	76.118	Callithrix_jacchus
ENSLACG00000005928	SYNJ1	98	69.394	ENSCAFG00000009041	SYNJ1	100	68.080	Canis_familiaris
ENSLACG00000005928	SYNJ1	98	68.540	ENSCAFG00020025776	SYNJ1	73	81.178	Canis_lupus_dingo
ENSLACG00000005928	SYNJ1	97	68.544	ENSCHIG00000005095	SYNJ1	100	68.130	Capra_hircus
ENSLACG00000005928	SYNJ1	96	71.532	ENSTSYG00000014541	SYNJ1	99	76.194	Carlito_syrichta
ENSLACG00000005928	SYNJ1	86	70.931	ENSCAPG00000014483	SYNJ1	92	72.227	Cavia_aperea
ENSLACG00000005928	SYNJ1	100	68.464	ENSCPOG00000012182	SYNJ1	100	76.888	Cavia_porcellus
ENSLACG00000005928	SYNJ1	84	76.894	ENSCCAG00000020825	SYNJ1	99	76.042	Cebus_capucinus
ENSLACG00000005928	SYNJ1	98	69.736	ENSCATG00000033891	SYNJ1	99	75.891	Cercocebus_atys
ENSLACG00000005928	SYNJ1	97	70.188	ENSCLAG00000009796	SYNJ1	100	86.827	Chinchilla_lanigera
ENSLACG00000005928	SYNJ1	84	77.028	ENSCSAG00000009654	SYNJ1	99	77.104	Chlorocebus_sabaeus
ENSLACG00000005928	SYNJ1	81	78.502	ENSCHOG00000012390	SYNJ1	86	78.502	Choloepus_hoffmanni
ENSLACG00000005928	SYNJ1	75	81.880	ENSCPBG00000006402	SYNJ1	93	80.718	Chrysemys_picta_bellii
ENSLACG00000005928	SYNJ1	98	69.929	ENSCANG00000031359	SYNJ1	99	76.118	Colobus_angolensis_palliatus
ENSLACG00000005928	SYNJ1	98	69.669	ENSCGRG00001010861	Synj1	100	76.133	Cricetulus_griseus_chok1gshd
ENSLACG00000005928	SYNJ1	82	76.780	ENSCGRG00000015749	Synj1	100	85.977	Cricetulus_griseus_crigri
ENSLACG00000005928	SYNJ1	70	76.359	ENSCSEG00000019614	synj1	86	75.928	Cynoglossus_semilaevis
ENSLACG00000005928	SYNJ1	70	74.028	ENSCVAG00000019250	synj1	99	66.838	Cyprinodon_variegatus
ENSLACG00000005928	SYNJ1	71	77.578	ENSDARG00000025011	synj1	100	69.453	Danio_rerio
ENSLACG00000005928	SYNJ1	98	67.418	ENSDNOG00000010732	SYNJ1	99	66.500	Dasypus_novemcinctus
ENSLACG00000005928	SYNJ1	72	89.744	ENSETEG00000018674	SYNJ1	73	89.744	Echinops_telfairi
ENSLACG00000005928	SYNJ1	98	69.409	ENSEASG00005006287	SYNJ1	98	83.333	Equus_asinus_asinus
ENSLACG00000005928	SYNJ1	98	70.263	ENSECAG00000004829	SYNJ1	100	68.968	Equus_caballus
ENSLACG00000005928	SYNJ1	92	77.634	ENSEEUG00000005150	SYNJ1	95	77.634	Erinaceus_europaeus
ENSLACG00000005928	SYNJ1	91	60.192	ENSELUG00000009731	synj1	100	56.735	Esox_lucius
ENSLACG00000005928	SYNJ1	82	76.643	ENSFCAG00000012498	SYNJ1	99	76.067	Felis_catus
ENSLACG00000005928	SYNJ1	79	60.158	ENSFALG00000004680	SYNJ1	100	60.000	Ficedula_albicollis
ENSLACG00000005928	SYNJ1	82	76.947	ENSFDAG00000016818	SYNJ1	100	86.544	Fukomys_damarensis
ENSLACG00000005928	SYNJ1	70	75.000	ENSFHEG00000017689	synj1	68	74.686	Fundulus_heteroclitus
ENSLACG00000005928	SYNJ1	64	73.366	ENSGMOG00000014852	synj1	77	72.994	Gadus_morhua
ENSLACG00000005928	SYNJ1	99	66.011	ENSGALG00000034317	SYNJ1	72	80.556	Gallus_gallus
ENSLACG00000005928	SYNJ1	70	74.547	ENSGAFG00000019466	synj1	89	74.208	Gambusia_affinis
ENSLACG00000005928	SYNJ1	70	70.901	ENSGACG00000020575	synj1	99	62.980	Gasterosteus_aculeatus
ENSLACG00000005928	SYNJ1	96	71.280	ENSGAGG00000022523	SYNJ1	100	76.751	Gopherus_agassizii
ENSLACG00000005928	SYNJ1	98	70.122	ENSGGOG00000015945	SYNJ1	99	76.422	Gorilla_gorilla
ENSLACG00000005928	SYNJ1	74	75.713	ENSHBUG00000007774	synj1	99	68.689	Haplochromis_burtoni
ENSLACG00000005928	SYNJ1	97	69.534	ENSHGLG00000006420	SYNJ1	100	86.261	Heterocephalus_glaber_female
ENSLACG00000005928	SYNJ1	97	69.534	ENSHGLG00100012591	SYNJ1	100	86.261	Heterocephalus_glaber_male
ENSLACG00000005928	SYNJ1	68	82.365	ENSHCOG00000012774	synj1	80	82.365	Hippocampus_comes
ENSLACG00000005928	SYNJ1	71	76.349	ENSIPUG00000010691	SYNJ1	99	62.075	Ictalurus_punctatus
ENSLACG00000005928	SYNJ1	96	70.778	ENSSTOG00000015806	SYNJ1	100	77.039	Ictidomys_tridecemlineatus
ENSLACG00000005928	SYNJ1	96	65.677	ENSJJAG00000020168	Synj1	100	63.965	Jaculus_jaculus
ENSLACG00000005928	SYNJ1	70	75.181	ENSKMAG00000004221	synj1	95	71.416	Kryptolebias_marmoratus
ENSLACG00000005928	SYNJ1	71	74.642	ENSLBEG00000015081	synj1	81	75.366	Labrus_bergylta
ENSLACG00000005928	SYNJ1	96	68.950	ENSLOCG00000009230	synj1	99	69.528	Lepisosteus_oculatus
ENSLACG00000005928	SYNJ1	98	69.434	ENSLAFG00000011806	SYNJ1	98	68.215	Loxodonta_africana
ENSLACG00000005928	SYNJ1	96	68.922	ENSMFAG00000018883	SYNJ1	99	75.950	Macaca_fascicularis
ENSLACG00000005928	SYNJ1	97	70.370	ENSMMUG00000004624	SYNJ1	99	76.876	Macaca_mulatta
ENSLACG00000005928	SYNJ1	96	71.164	ENSMNEG00000040077	SYNJ1	94	76.667	Macaca_nemestrina
ENSLACG00000005928	SYNJ1	98	69.800	ENSMLEG00000037029	SYNJ1	99	75.967	Mandrillus_leucophaeus
ENSLACG00000005928	SYNJ1	71	75.468	ENSMAMG00000013404	synj1	99	59.928	Mastacembelus_armatus
ENSLACG00000005928	SYNJ1	71	75.874	ENSMZEG00005024358	synj1	95	64.228	Maylandia_zebra
ENSLACG00000005928	SYNJ1	99	67.664	ENSMGAG00000014522	SYNJ1	100	67.726	Meleagris_gallopavo
ENSLACG00000005928	SYNJ1	82	76.703	ENSMAUG00000009743	Synj1	100	85.836	Mesocricetus_auratus
ENSLACG00000005928	SYNJ1	98	69.838	ENSMICG00000034953	SYNJ1	99	76.462	Microcebus_murinus
ENSLACG00000005928	SYNJ1	73	73.974	ENSMMOG00000010203	synj1	83	77.017	Mola_mola
ENSLACG00000005928	SYNJ1	81	71.984	ENSMODG00000021073	SYNJ1	100	70.646	Monodelphis_domestica
ENSLACG00000005928	SYNJ1	92	64.840	ENSMALG00000014015	synj1	96	60.872	Monopterus_albus
ENSLACG00000005928	SYNJ1	98	69.624	MGP_CAROLIEiJ_G0020951	Synj1	100	86.544	Mus_caroli
ENSLACG00000005928	SYNJ1	98	69.883	ENSMUSG00000022973	Synj1	100	86.686	Mus_musculus
ENSLACG00000005928	SYNJ1	96	71.021	MGP_PahariEiJ_G0016656	Synj1	100	86.686	Mus_pahari
ENSLACG00000005928	SYNJ1	98	69.903	MGP_SPRETEiJ_G0021857	Synj1	100	86.827	Mus_spretus
ENSLACG00000005928	SYNJ1	98	70.342	ENSMPUG00000001153	SYNJ1	100	69.236	Mustela_putorius_furo
ENSLACG00000005928	SYNJ1	63	59.113	ENSMLUG00000005764	-	98	57.277	Myotis_lucifugus
ENSLACG00000005928	SYNJ1	83	77.701	ENSNGAG00000000453	Synj1	100	86.827	Nannospalax_galili
ENSLACG00000005928	SYNJ1	71	72.262	ENSNBRG00000011936	synj1	81	70.465	Neolamprologus_brichardi
ENSLACG00000005928	SYNJ1	87	63.362	ENSNLEG00000003734	SYNJ1	99	69.282	Nomascus_leucogenys
ENSLACG00000005928	SYNJ1	71	66.978	ENSMEUG00000004158	-	71	67.048	Notamacropus_eugenii
ENSLACG00000005928	SYNJ1	89	83.696	ENSOPRG00000013602	SYNJ1	87	83.696	Ochotona_princeps
ENSLACG00000005928	SYNJ1	91	66.116	ENSONIG00000004667	synj1	100	66.321	Oreochromis_niloticus
ENSLACG00000005928	SYNJ1	87	71.936	ENSOANG00000006929	SYNJ1	94	67.893	Ornithorhynchus_anatinus
ENSLACG00000005928	SYNJ1	96	68.526	ENSOCUG00000001420	SYNJ1	95	68.961	Oryctolagus_cuniculus
ENSLACG00000005928	SYNJ1	71	75.717	ENSORLG00000004320	synj1	99	68.386	Oryzias_latipes
ENSLACG00000005928	SYNJ1	71	73.619	ENSORLG00020011994	synj1	98	66.667	Oryzias_latipes_hni
ENSLACG00000005928	SYNJ1	71	75.223	ENSORLG00015018077	synj1	92	60.528	Oryzias_latipes_hsok
ENSLACG00000005928	SYNJ1	71	74.955	ENSOMEG00000014322	synj1	85	73.730	Oryzias_melastigma
ENSLACG00000005928	SYNJ1	98	67.179	ENSOGAG00000006010	SYNJ1	98	66.208	Otolemur_garnettii
ENSLACG00000005928	SYNJ1	96	70.611	ENSOARG00000013414	SYNJ1	97	68.703	Ovis_aries
ENSLACG00000005928	SYNJ1	98	69.800	ENSPPAG00000026784	SYNJ1	99	76.042	Pan_paniscus
ENSLACG00000005928	SYNJ1	98	69.241	ENSPPRG00000023469	SYNJ1	99	76.067	Panthera_pardus
ENSLACG00000005928	SYNJ1	98	69.582	ENSPTIG00000007930	SYNJ1	99	76.143	Panthera_tigris_altaica
ENSLACG00000005928	SYNJ1	98	69.800	ENSPTRG00000023787	SYNJ1	99	76.042	Pan_troglodytes
ENSLACG00000005928	SYNJ1	98	68.584	ENSPTRG00000048135	-	98	66.959	Pan_troglodytes
ENSLACG00000005928	SYNJ1	98	69.781	ENSPANG00000022531	SYNJ1	99	76.801	Papio_anubis
ENSLACG00000005928	SYNJ1	74	77.730	ENSPKIG00000022603	synj1	95	75.600	Paramormyrops_kingsleyae
ENSLACG00000005928	SYNJ1	70	75.656	ENSPMGG00000016831	synj1	96	75.293	Periophthalmus_magnuspinnatus
ENSLACG00000005928	SYNJ1	82	77.477	ENSPEMG00000018767	Synj1	100	86.544	Peromyscus_maniculatus_bairdii
ENSLACG00000005928	SYNJ1	66	60.728	ENSPMAG00000002887	synj1	80	60.316	Petromyzon_marinus
ENSLACG00000005928	SYNJ1	99	64.688	ENSPCIG00000016372	SYNJ1	99	73.509	Phascolarctos_cinereus
ENSLACG00000005928	SYNJ1	70	75.542	ENSPFOG00000016886	synj1	99	62.042	Poecilia_formosa
ENSLACG00000005928	SYNJ1	70	74.821	ENSPLAG00000017559	synj1	89	74.506	Poecilia_latipinna
ENSLACG00000005928	SYNJ1	70	74.552	ENSPMEG00000007643	synj1	87	74.237	Poecilia_mexicana
ENSLACG00000005928	SYNJ1	70	75.790	ENSPREG00000012412	synj1	99	67.539	Poecilia_reticulata
ENSLACG00000005928	SYNJ1	85	75.760	ENSPPYG00000011365	SYNJ1	96	75.760	Pongo_abelii
ENSLACG00000005928	SYNJ1	78	84.286	ENSPCAG00000009906	SYNJ1	85	84.286	Procavia_capensis
ENSLACG00000005928	SYNJ1	91	82.382	ENSPCOG00000024841	SYNJ1	99	81.159	Propithecus_coquereli
ENSLACG00000005928	SYNJ1	98	66.023	ENSPVAG00000000892	SYNJ1	100	65.147	Pteropus_vampyrus
ENSLACG00000005928	SYNJ1	71	74.664	ENSPNYG00000022989	synj1	84	74.552	Pundamilia_nyererei
ENSLACG00000005928	SYNJ1	71	76.730	ENSPNAG00000021119	synj1	91	76.640	Pygocentrus_nattereri
ENSLACG00000005928	SYNJ1	98	69.504	ENSRNOG00000002051	Synj1	100	76.662	Rattus_norvegicus
ENSLACG00000005928	SYNJ1	98	70.122	ENSRBIG00000034477	SYNJ1	99	76.194	Rhinopithecus_bieti
ENSLACG00000005928	SYNJ1	98	70.122	ENSRROG00000039256	SYNJ1	99	76.194	Rhinopithecus_roxellana
ENSLACG00000005928	SYNJ1	98	69.705	ENSSBOG00000021001	SYNJ1	99	75.698	Saimiri_boliviensis_boliviensis
ENSLACG00000005928	SYNJ1	98	67.179	ENSSHAG00000008538	SYNJ1	99	65.611	Sarcophilus_harrisii
ENSLACG00000005928	SYNJ1	96	64.010	ENSSFOG00015006095	synj1	95	64.157	Scleropages_formosus
ENSLACG00000005928	SYNJ1	84	66.886	ENSSMAG00000018066	synj1	99	66.374	Scophthalmus_maximus
ENSLACG00000005928	SYNJ1	71	75.426	ENSSDUG00000013058	synj1	99	59.178	Seriola_dumerili
ENSLACG00000005928	SYNJ1	70	76.087	ENSSLDG00000021406	synj1	99	67.459	Seriola_lalandi_dorsalis
ENSLACG00000005928	SYNJ1	67	84.815	ENSSARG00000009490	SYNJ1	73	84.815	Sorex_araneus
ENSLACG00000005928	SYNJ1	71	80.162	ENSSPUG00000012552	SYNJ1	72	80.162	Sphenodon_punctatus
ENSLACG00000005928	SYNJ1	66	75.048	ENSSPAG00000006812	SYNJ1	65	74.688	Stegastes_partitus
ENSLACG00000005928	SYNJ1	71	75.785	ENSSPAG00000017029	synj1	83	73.716	Stegastes_partitus
ENSLACG00000005928	SYNJ1	98	65.565	ENSSSCG00000012035	SYNJ1	100	74.346	Sus_scrofa
ENSLACG00000005928	SYNJ1	99	68.699	ENSTGUG00000013445	SYNJ1	100	68.575	Taeniopygia_guttata
ENSLACG00000005928	SYNJ1	74	73.339	ENSTRUG00000006907	synj1	82	77.140	Takifugu_rubripes
ENSLACG00000005928	SYNJ1	90	63.586	ENSTNIG00000009940	synj1	99	65.469	Tetraodon_nigroviridis
ENSLACG00000005928	SYNJ1	86	89.557	ENSTBEG00000016298	SYNJ1	92	74.608	Tupaia_belangeri
ENSLACG00000005928	SYNJ1	98	63.748	ENSTTRG00000002222	SYNJ1	100	61.385	Tursiops_truncatus
ENSLACG00000005928	SYNJ1	98	68.908	ENSUAMG00000018606	SYNJ1	99	84.695	Ursus_americanus
ENSLACG00000005928	SYNJ1	93	81.900	ENSUMAG00000018419	SYNJ1	99	84.695	Ursus_maritimus
ENSLACG00000005928	SYNJ1	84	85.714	ENSVPAG00000001241	SYNJ1	87	85.714	Vicugna_pacos
ENSLACG00000005928	SYNJ1	98	69.781	ENSVVUG00000023125	SYNJ1	99	77.273	Vulpes_vulpes
ENSLACG00000005928	SYNJ1	99	65.258	ENSXETG00000009899	synj1	99	64.735	Xenopus_tropicalis
ENSLACG00000005928	SYNJ1	70	75.566	ENSXCOG00000011896	synj1	84	75.023	Xiphophorus_couchianus
ENSLACG00000005928	SYNJ1	70	75.566	ENSXMAG00000017524	synj1	99	67.820	Xiphophorus_maculatus