EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000005971 (Gene tree)
Gene ID: 102356688
Gene Symbol: BRIX1
Alias: BRIX|BXDC2|FLJ11100
Full Name: BRX1%2C biogenesis of ribosomes
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 23379 bases
Position: chrJH127348.1:194776-218154
Accession: 102356688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000006732	Brix	PF04427.18	9.7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000006786	BRIX1-201	1299	XM_006002292	ENSLACP00000006732	345 (aa)	XP_006002354	H3AAR1

Gene Model

Click here to download ENSLACG00000005971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000005971's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000005971	BRIX1	99	73.410	ENSG00000113460	BRIX1	98	73.410	Homo_sapiens
ENSLACG00000005971	BRIX1	98	74.194	ENSAPOG00000020334	bxdc2	99	73.314	Acanthochromis_polyacanthus
ENSLACG00000005971	BRIX1	99	71.347	ENSAMEG00000003295	BRIX1	98	72.254	Ailuropoda_melanoleuca
ENSLACG00000005971	BRIX1	92	75.235	ENSACIG00000017003	bxdc2	99	73.964	Amphilophus_citrinellus
ENSLACG00000005971	BRIX1	98	71.765	ENSAOCG00000000941	bxdc2	99	72.434	Amphiprion_ocellaris
ENSLACG00000005971	BRIX1	98	71.765	ENSAPEG00000017124	bxdc2	99	72.434	Amphiprion_percula
ENSLACG00000005971	BRIX1	99	73.256	ENSATEG00000016635	bxdc2	99	72.384	Anabas_testudineus
ENSLACG00000005971	BRIX1	85	72.355	ENSAPLG00000006647	BRIX1	90	76.316	Anas_platyrhynchos
ENSLACG00000005971	BRIX1	98	73.887	ENSACAG00000008586	BRIX1	91	74.303	Anolis_carolinensis
ENSLACG00000005971	BRIX1	99	67.442	ENSANAG00000010505	-	98	67.442	Aotus_nancymaae
ENSLACG00000005971	BRIX1	99	71.348	ENSANAG00000022329	-	98	71.348	Aotus_nancymaae
ENSLACG00000005971	BRIX1	98	72.941	ENSACLG00000005213	bxdc2	99	72.647	Astatotilapia_calliptera
ENSLACG00000005971	BRIX1	88	76.144	ENSAMXG00000043121	bxdc2	91	73.567	Astyanax_mexicanus
ENSLACG00000005971	BRIX1	99	72.832	ENSBTAG00000019211	BRIX1	98	72.832	Bos_taurus
ENSLACG00000005971	BRIX1	66	53.478	WBGene00019678	K12H4.3	65	53.478	Caenorhabditis_elegans
ENSLACG00000005971	BRIX1	99	73.121	ENSCJAG00000018506	-	98	73.121	Callithrix_jacchus
ENSLACG00000005971	BRIX1	99	71.387	ENSCJAG00000007390	-	98	71.387	Callithrix_jacchus
ENSLACG00000005971	BRIX1	99	69.364	ENSCAFG00000018797	BRIX1	98	69.653	Canis_familiaris
ENSLACG00000005971	BRIX1	99	63.295	ENSCAFG00020016783	BRIX1	98	63.584	Canis_lupus_dingo
ENSLACG00000005971	BRIX1	99	68.768	ENSCHIG00000015024	BRIX1	98	68.481	Capra_hircus
ENSLACG00000005971	BRIX1	99	73.563	ENSTSYG00000002898	BRIX1	99	73.563	Carlito_syrichta
ENSLACG00000005971	BRIX1	85	62.457	ENSCAPG00000009776	BRIX1	97	62.457	Cavia_aperea
ENSLACG00000005971	BRIX1	87	79.000	ENSCPOG00000022064	BRIX1	98	73.021	Cavia_porcellus
ENSLACG00000005971	BRIX1	99	72.286	ENSCCAG00000033405	BRIX1	98	73.199	Cebus_capucinus
ENSLACG00000005971	BRIX1	99	72.832	ENSCATG00000037721	BRIX1	98	72.832	Cercocebus_atys
ENSLACG00000005971	BRIX1	87	78.000	ENSCLAG00000008124	BRIX1	98	71.014	Chinchilla_lanigera
ENSLACG00000005971	BRIX1	99	72.365	ENSCSAG00000017117	BRIX1	98	73.410	Chlorocebus_sabaeus
ENSLACG00000005971	BRIX1	96	59.524	ENSCHOG00000012227	-	96	59.524	Choloepus_hoffmanni
ENSLACG00000005971	BRIX1	86	79.322	ENSCHOG00000001790	-	96	72.485	Choloepus_hoffmanni
ENSLACG00000005971	BRIX1	99	75.439	ENSCPBG00000021309	BRIX1	90	78.797	Chrysemys_picta_bellii
ENSLACG00000005971	BRIX1	76	56.705	ENSCING00000001695	-	98	56.705	Ciona_intestinalis
ENSLACG00000005971	BRIX1	84	54.485	ENSCSAVG00000008644	-	98	54.485	Ciona_savignyi
ENSLACG00000005971	BRIX1	99	73.121	ENSCANG00000022969	BRIX1	97	73.121	Colobus_angolensis_palliatus
ENSLACG00000005971	BRIX1	97	71.848	ENSCGRG00001007932	Brix1	90	74.608	Cricetulus_griseus_chok1gshd
ENSLACG00000005971	BRIX1	97	71.848	ENSCGRG00000016743	Brix1	90	74.608	Cricetulus_griseus_crigri
ENSLACG00000005971	BRIX1	99	72.303	ENSCSEG00000019821	bxdc2	93	74.448	Cynoglossus_semilaevis
ENSLACG00000005971	BRIX1	99	70.349	ENSCVAG00000016942	bxdc2	99	69.767	Cyprinodon_variegatus
ENSLACG00000005971	BRIX1	83	74.306	ENSDARG00000098935	bxdc2	77	73.311	Danio_rerio
ENSLACG00000005971	BRIX1	86	78.983	ENSDNOG00000002878	BRIX1	97	71.848	Dasypus_novemcinctus
ENSLACG00000005971	BRIX1	99	73.487	ENSDORG00000009369	Brix1	98	73.487	Dipodomys_ordii
ENSLACG00000005971	BRIX1	67	60.776	FBgn0035524	CG11583	65	60.776	Drosophila_melanogaster
ENSLACG00000005971	BRIX1	98	68.406	ENSETEG00000017842	-	99	68.406	Echinops_telfairi
ENSLACG00000005971	BRIX1	99	68.286	ENSETEG00000017329	-	98	68.678	Echinops_telfairi
ENSLACG00000005971	BRIX1	83	67.247	ENSEBUG00000007717	BRIX1	90	63.987	Eptatretus_burgeri
ENSLACG00000005971	BRIX1	99	72.832	ENSEASG00005014968	BRIX1	98	72.832	Equus_asinus_asinus
ENSLACG00000005971	BRIX1	99	72.543	ENSECAG00000000377	BRIX1	90	72.543	Equus_caballus
ENSLACG00000005971	BRIX1	96	64.759	ENSEEUG00000008350	BRIX1	85	67.097	Erinaceus_europaeus
ENSLACG00000005971	BRIX1	99	73.977	ENSELUG00000009050	bxdc2	95	73.684	Esox_lucius
ENSLACG00000005971	BRIX1	99	72.543	ENSFCAG00000042465	BRIX1	98	72.543	Felis_catus
ENSLACG00000005971	BRIX1	94	73.591	ENSFALG00000002106	BRIX1	89	75.542	Ficedula_albicollis
ENSLACG00000005971	BRIX1	99	73.487	ENSFDAG00000018960	BRIX1	98	73.487	Fukomys_damarensis
ENSLACG00000005971	BRIX1	98	72.434	ENSFHEG00000004488	bxdc2	99	71.554	Fundulus_heteroclitus
ENSLACG00000005971	BRIX1	83	77.352	ENSGMOG00000002425	bxdc2	94	80.224	Gadus_morhua
ENSLACG00000005971	BRIX1	95	74.018	ENSGALG00000003373	BRIX1	91	76.025	Gallus_gallus
ENSLACG00000005971	BRIX1	92	73.520	ENSGAFG00000011947	bxdc2	99	70.930	Gambusia_affinis
ENSLACG00000005971	BRIX1	93	71.914	ENSGACG00000016491	bxdc2	93	73.186	Gasterosteus_aculeatus
ENSLACG00000005971	BRIX1	92	76.636	ENSGAGG00000011959	BRIX1	98	74.344	Gopherus_agassizii
ENSLACG00000005971	BRIX1	99	73.410	ENSGGOG00000004225	BRIX1	98	73.410	Gorilla_gorilla
ENSLACG00000005971	BRIX1	98	73.235	ENSHBUG00000017923	bxdc2	99	72.941	Haplochromis_burtoni
ENSLACG00000005971	BRIX1	95	59.633	ENSHGLG00000017782	-	95	59.633	Heterocephalus_glaber_female
ENSLACG00000005971	BRIX1	88	60.726	ENSHGLG00000010349	-	83	62.676	Heterocephalus_glaber_female
ENSLACG00000005971	BRIX1	99	73.121	ENSHGLG00000004566	BRIX1	98	73.121	Heterocephalus_glaber_female
ENSLACG00000005971	BRIX1	85	64.384	ENSHGLG00000000296	-	94	61.442	Heterocephalus_glaber_female
ENSLACG00000005971	BRIX1	99	56.647	ENSHGLG00000002055	-	89	57.994	Heterocephalus_glaber_female
ENSLACG00000005971	BRIX1	85	64.626	ENSHGLG00100000909	-	75	61.755	Heterocephalus_glaber_male
ENSLACG00000005971	BRIX1	89	60.784	ENSHGLG00100001527	-	78	61.972	Heterocephalus_glaber_male
ENSLACG00000005971	BRIX1	99	73.775	ENSHGLG00100002204	-	98	73.775	Heterocephalus_glaber_male
ENSLACG00000005971	BRIX1	98	69.883	ENSHGLG00100000068	-	95	69.883	Heterocephalus_glaber_male
ENSLACG00000005971	BRIX1	98	72.141	ENSHCOG00000011674	bxdc2	99	72.141	Hippocampus_comes
ENSLACG00000005971	BRIX1	99	71.387	ENSIPUG00000015099	brix1	91	75.316	Ictalurus_punctatus
ENSLACG00000005971	BRIX1	86	78.644	ENSSTOG00000009600	BRIX1	97	72.727	Ictidomys_tridecemlineatus
ENSLACG00000005971	BRIX1	75	79.087	ENSJJAG00000001806	-	100	79.087	Jaculus_jaculus
ENSLACG00000005971	BRIX1	99	67.052	ENSJJAG00000001423	-	98	67.052	Jaculus_jaculus
ENSLACG00000005971	BRIX1	99	65.029	ENSJJAG00000004662	-	98	65.029	Jaculus_jaculus
ENSLACG00000005971	BRIX1	89	67.638	ENSJJAG00000009708	-	83	70.922	Jaculus_jaculus
ENSLACG00000005971	BRIX1	99	71.802	ENSKMAG00000014487	bxdc2	99	71.802	Kryptolebias_marmoratus
ENSLACG00000005971	BRIX1	99	70.381	ENSLBEG00000018123	bxdc2	100	70.468	Labrus_bergylta
ENSLACG00000005971	BRIX1	99	76.879	ENSLOCG00000011774	bxdc2	99	77.168	Lepisosteus_oculatus
ENSLACG00000005971	BRIX1	99	72.254	ENSLAFG00000007249	BRIX1	98	72.254	Loxodonta_africana
ENSLACG00000005971	BRIX1	99	73.121	ENSMFAG00000033107	BRIX1	98	73.121	Macaca_fascicularis
ENSLACG00000005971	BRIX1	99	73.121	ENSMMUG00000038794	BRIX1	98	73.121	Macaca_mulatta
ENSLACG00000005971	BRIX1	87	79.333	ENSMNEG00000039324	BRIX1	98	72.832	Macaca_nemestrina
ENSLACG00000005971	BRIX1	99	73.121	ENSMLEG00000041564	BRIX1	98	73.121	Mandrillus_leucophaeus
ENSLACG00000005971	BRIX1	99	73.469	ENSMAMG00000015004	bxdc2	99	72.595	Mastacembelus_armatus
ENSLACG00000005971	BRIX1	98	72.941	ENSMZEG00005019808	bxdc2	99	72.647	Maylandia_zebra
ENSLACG00000005971	BRIX1	54	76.596	ENSMGAG00000003156	BRIX1	85	80.460	Meleagris_gallopavo
ENSLACG00000005971	BRIX1	83	79.514	ENSMAUG00000014172	Brix1	89	83.459	Mesocricetus_auratus
ENSLACG00000005971	BRIX1	99	73.121	ENSMICG00000005672	BRIX1	98	73.121	Microcebus_murinus
ENSLACG00000005971	BRIX1	97	72.727	ENSMOCG00000018798	Brix1	90	75.549	Microtus_ochrogaster
ENSLACG00000005971	BRIX1	99	73.021	ENSMMOG00000000861	bxdc2	100	73.099	Mola_mola
ENSLACG00000005971	BRIX1	90	78.641	ENSMODG00000020386	BRIX1	98	72.934	Monodelphis_domestica
ENSLACG00000005971	BRIX1	98	66.862	ENSMALG00000020437	bxdc2	99	66.276	Monopterus_albus
ENSLACG00000005971	BRIX1	99	71.839	MGP_CAROLIEiJ_G0019665	Brix1	90	74.922	Mus_caroli
ENSLACG00000005971	BRIX1	99	71.839	ENSMUSG00000022247	Brix1	99	71.839	Mus_musculus
ENSLACG00000005971	BRIX1	99	71.839	MGP_SPRETEiJ_G0020562	Brix1	99	71.839	Mus_spretus
ENSLACG00000005971	BRIX1	99	72.543	ENSMPUG00000015137	BRIX1	98	72.543	Mustela_putorius_furo
ENSLACG00000005971	BRIX1	63	88.991	ENSMLUG00000029255	BRIX1	100	78.409	Myotis_lucifugus
ENSLACG00000005971	BRIX1	87	78.000	ENSNGAG00000021812	-	98	72.254	Nannospalax_galili
ENSLACG00000005971	BRIX1	86	78.305	ENSNGAG00000002585	-	99	72.434	Nannospalax_galili
ENSLACG00000005971	BRIX1	98	72.647	ENSNBRG00000008850	bxdc2	94	72.353	Neolamprologus_brichardi
ENSLACG00000005971	BRIX1	99	69.075	ENSNLEG00000032149	BRIX1	98	69.075	Nomascus_leucogenys
ENSLACG00000005971	BRIX1	70	76.543	ENSMEUG00000016482	BRIX1	68	76.543	Notamacropus_eugenii
ENSLACG00000005971	BRIX1	58	85.075	ENSOPRG00000012886	BRIX1	100	85.075	Ochotona_princeps
ENSLACG00000005971	BRIX1	83	77.055	ENSODEG00000019171	-	100	77.055	Octodon_degus
ENSLACG00000005971	BRIX1	71	59.426	ENSODEG00000002389	-	77	59.426	Octodon_degus
ENSLACG00000005971	BRIX1	77	69.697	ENSODEG00000010997	-	89	63.871	Octodon_degus
ENSLACG00000005971	BRIX1	100	72.334	ENSONIG00000007725	bxdc2	99	71.758	Oreochromis_niloticus
ENSLACG00000005971	BRIX1	83	82.986	ENSOANG00000014525	-	89	85.714	Ornithorhynchus_anatinus
ENSLACG00000005971	BRIX1	87	79.000	ENSOCUG00000014478	BRIX1	98	73.121	Oryctolagus_cuniculus
ENSLACG00000005971	BRIX1	98	72.807	ENSORLG00000005895	bxdc2	92	74.214	Oryzias_latipes
ENSLACG00000005971	BRIX1	98	72.807	ENSORLG00020005201	bxdc2	92	74.214	Oryzias_latipes_hni
ENSLACG00000005971	BRIX1	98	72.515	ENSORLG00015011685	bxdc2	92	73.899	Oryzias_latipes_hsok
ENSLACG00000005971	BRIX1	98	73.684	ENSOMEG00000007680	bxdc2	93	75.625	Oryzias_melastigma
ENSLACG00000005971	BRIX1	87	79.333	ENSOGAG00000014827	BRIX1	97	72.674	Otolemur_garnettii
ENSLACG00000005971	BRIX1	99	72.779	ENSOARG00000011539	BRIX1	98	72.779	Ovis_aries
ENSLACG00000005971	BRIX1	99	73.410	ENSPPAG00000038183	BRIX1	98	73.410	Pan_paniscus
ENSLACG00000005971	BRIX1	99	72.254	ENSPPRG00000023961	BRIX1	98	72.254	Panthera_pardus
ENSLACG00000005971	BRIX1	99	72.543	ENSPTIG00000006466	BRIX1	98	72.543	Panthera_tigris_altaica
ENSLACG00000005971	BRIX1	99	73.410	ENSPTRG00000016784	BRIX1	98	73.410	Pan_troglodytes
ENSLACG00000005971	BRIX1	99	73.121	ENSPANG00000016504	BRIX1	97	73.121	Papio_anubis
ENSLACG00000005971	BRIX1	99	74.052	ENSPKIG00000005920	bxdc2	84	74.052	Paramormyrops_kingsleyae
ENSLACG00000005971	BRIX1	78	80.669	ENSPSIG00000011219	BRIX1	98	79.926	Pelodiscus_sinensis
ENSLACG00000005971	BRIX1	98	66.667	ENSPMGG00000022988	bxdc2	99	66.276	Periophthalmus_magnuspinnatus
ENSLACG00000005971	BRIX1	97	71.848	ENSPEMG00000016920	Brix1	90	74.608	Peromyscus_maniculatus_bairdii
ENSLACG00000005971	BRIX1	88	79.139	ENSPCIG00000022778	BRIX1	98	72.493	Phascolarctos_cinereus
ENSLACG00000005971	BRIX1	99	72.012	ENSPFOG00000008577	bxdc2	82	71.221	Poecilia_formosa
ENSLACG00000005971	BRIX1	99	71.720	ENSPLAG00000006772	bxdc2	91	70.845	Poecilia_latipinna
ENSLACG00000005971	BRIX1	99	72.012	ENSPMEG00000020229	bxdc2	91	71.221	Poecilia_mexicana
ENSLACG00000005971	BRIX1	99	71.720	ENSPREG00000017461	bxdc2	91	70.930	Poecilia_reticulata
ENSLACG00000005971	BRIX1	99	69.364	ENSPPYG00000015390	BRIX1	98	69.364	Pongo_abelii
ENSLACG00000005971	BRIX1	79	64.234	ENSPCOG00000016748	-	92	60.261	Propithecus_coquereli
ENSLACG00000005971	BRIX1	99	72.832	ENSPCOG00000018281	-	98	72.832	Propithecus_coquereli
ENSLACG00000005971	BRIX1	85	75.427	ENSPVAG00000016925	BRIX1	98	75.427	Pteropus_vampyrus
ENSLACG00000005971	BRIX1	98	72.941	ENSPNYG00000007707	bxdc2	99	72.647	Pundamilia_nyererei
ENSLACG00000005971	BRIX1	93	73.148	ENSPNAG00000010431	bxdc2	91	73.899	Pygocentrus_nattereri
ENSLACG00000005971	BRIX1	99	72.622	ENSRNOG00000018021	Brix1	99	72.622	Rattus_norvegicus
ENSLACG00000005971	BRIX1	99	72.832	ENSRBIG00000042083	BRIX1	97	72.832	Rhinopithecus_bieti
ENSLACG00000005971	BRIX1	99	73.121	ENSRROG00000031228	BRIX1	97	73.121	Rhinopithecus_roxellana
ENSLACG00000005971	BRIX1	70	48.819	YOL077C	-	87	48.819	Saccharomyces_cerevisiae
ENSLACG00000005971	BRIX1	99	72.254	ENSSBOG00000017845	-	98	72.254	Saimiri_boliviensis_boliviensis
ENSLACG00000005971	BRIX1	99	73.410	ENSSBOG00000033290	-	98	73.410	Saimiri_boliviensis_boliviensis
ENSLACG00000005971	BRIX1	93	75.229	ENSSHAG00000010794	BRIX1	98	73.066	Sarcophilus_harrisii
ENSLACG00000005971	BRIX1	92	76.324	ENSSFOG00015022435	brix1	100	73.410	Scleropages_formosus
ENSLACG00000005971	BRIX1	97	71.302	ENSSMAG00000005909	bxdc2	93	73.734	Scophthalmus_maximus
ENSLACG00000005971	BRIX1	98	74.487	ENSSDUG00000016234	bxdc2	99	73.900	Seriola_dumerili
ENSLACG00000005971	BRIX1	98	74.412	ENSSLDG00000007044	bxdc2	99	73.824	Seriola_lalandi_dorsalis
ENSLACG00000005971	BRIX1	87	76.333	ENSSARG00000009879	BRIX1	98	68.347	Sorex_araneus
ENSLACG00000005971	BRIX1	99	71.765	ENSSPUG00000000011	-	90	75.159	Sphenodon_punctatus
ENSLACG00000005971	BRIX1	85	81.164	ENSSPUG00000019166	-	89	86.090	Sphenodon_punctatus
ENSLACG00000005971	BRIX1	98	73.900	ENSSPAG00000006309	bxdc2	99	73.314	Stegastes_partitus
ENSLACG00000005971	BRIX1	99	73.699	ENSSSCG00000016827	BRIX1	97	73.699	Sus_scrofa
ENSLACG00000005971	BRIX1	94	75.758	ENSTGUG00000001961	BRIX1	91	77.532	Taeniopygia_guttata
ENSLACG00000005971	BRIX1	99	72.595	ENSTRUG00000011403	bxdc2	100	71.720	Takifugu_rubripes
ENSLACG00000005971	BRIX1	93	74.303	ENSTNIG00000007517	bxdc2	98	72.093	Tetraodon_nigroviridis
ENSLACG00000005971	BRIX1	85	75.427	ENSTBEG00000011652	BRIX1	98	75.427	Tupaia_belangeri
ENSLACG00000005971	BRIX1	98	72.012	ENSTTRG00000003262	BRIX1	97	72.012	Tursiops_truncatus
ENSLACG00000005971	BRIX1	99	61.318	ENSUAMG00000022481	BRIX1	98	61.605	Ursus_americanus
ENSLACG00000005971	BRIX1	99	72.832	ENSUMAG00000012900	BRIX1	98	72.832	Ursus_maritimus
ENSLACG00000005971	BRIX1	63	75.566	ENSVPAG00000010128	BRIX1	63	75.566	Vicugna_pacos
ENSLACG00000005971	BRIX1	99	65.607	ENSVVUG00000022099	BRIX1	98	65.896	Vulpes_vulpes
ENSLACG00000005971	BRIX1	99	72.727	ENSXETG00000000703	brix1	99	71.848	Xenopus_tropicalis
ENSLACG00000005971	BRIX1	99	72.595	ENSXCOG00000002461	bxdc2	99	71.720	Xiphophorus_couchianus
ENSLACG00000005971	BRIX1	99	72.384	ENSXMAG00000004284	bxdc2	86	71.512	Xiphophorus_maculatus