EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000006206 (Gene tree)
Gene ID: 102357762
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type 4
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 95621 bases
Position: chrJH126671.1:201141-296761
Accession: 102357762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000023486	zf-met	PF12874.7	2.5e-29	1	4
ENSLACP00000023486	zf-met	PF12874.7	2.5e-29	2	4
ENSLACP00000023486	zf-met	PF12874.7	2.5e-29	3	4
ENSLACP00000023486	zf-met	PF12874.7	2.5e-29	4	4
ENSLACP00000006989	zf-met	PF12874.7	1.1e-22	1	3
ENSLACP00000006989	zf-met	PF12874.7	1.1e-22	2	3
ENSLACP00000006989	zf-met	PF12874.7	1.1e-22	3	3
ENSLACP00000023486	zf-C2H2_jaz	PF12171.8	4.8e-22	1	2
ENSLACP00000023486	zf-C2H2_jaz	PF12171.8	4.8e-22	2	2
ENSLACP00000006989	zf-C2H2_jaz	PF12171.8	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007048	-	594	-	ENSLACP00000006989	198 (aa)	-	H3ABG8
ENSLACT00000026134	-	1083	XM_005991868	ENSLACP00000023486	231 (aa)	XP_005991930	M3XL80

Gene Model

Click here to download ENSLACG00000006206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006206's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000006206	-	99	46.541	ENSLACG00000007897	ZNF346	84	51.397
ENSLACG00000006206	-	74	51.678	ENSLACG00000005109	-	96	51.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006206	-	99	78.509	ENSG00000165061	ZMAT4	99	78.509	Homo_sapiens
ENSLACG00000006206	-	79	74.522	ENSAPOG00000007448	zmat4a	97	62.814	Acanthochromis_polyacanthus
ENSLACG00000006206	-	97	77.232	ENSAMEG00000002758	ZMAT4	100	77.232	Ailuropoda_melanoleuca
ENSLACG00000006206	-	97	75.336	ENSACIG00000009080	zmat4a	99	75.336	Amphilophus_citrinellus
ENSLACG00000006206	-	99	76.087	ENSAOCG00000004416	zmat4a	88	76.087	Amphiprion_ocellaris
ENSLACG00000006206	-	99	75.652	ENSAPEG00000018565	zmat4a	88	75.652	Amphiprion_percula
ENSLACG00000006206	-	97	76.233	ENSATEG00000012630	zmat4a	76	85.185	Anabas_testudineus
ENSLACG00000006206	-	99	80.263	ENSAPLG00000006106	ZMAT4	99	80.263	Anas_platyrhynchos
ENSLACG00000006206	-	97	81.250	ENSACAG00000005388	ZMAT4	92	81.250	Anolis_carolinensis
ENSLACG00000006206	-	99	78.509	ENSANAG00000027926	ZMAT4	99	78.509	Aotus_nancymaae
ENSLACG00000006206	-	99	76.522	ENSACLG00000005038	zmat4a	88	76.522	Astatotilapia_calliptera
ENSLACG00000006206	-	97	72.197	ENSAMXG00000035337	zmat4a	99	74.439	Astyanax_mexicanus
ENSLACG00000006206	-	99	77.632	ENSBTAG00000017420	ZMAT4	99	77.632	Bos_taurus
ENSLACG00000006206	-	99	77.193	ENSCAFG00000005744	ZMAT4	99	77.193	Canis_familiaris
ENSLACG00000006206	-	83	70.303	ENSCAFG00020002716	ZMAT4	96	70.303	Canis_lupus_dingo
ENSLACG00000006206	-	99	78.070	ENSCHIG00000022017	ZMAT4	100	77.434	Capra_hircus
ENSLACG00000006206	-	83	71.515	ENSTSYG00000031413	ZMAT4	99	72.561	Carlito_syrichta
ENSLACG00000006206	-	99	76.754	ENSCAPG00000014401	ZMAT4	99	76.754	Cavia_aperea
ENSLACG00000006206	-	99	76.754	ENSCPOG00000015224	ZMAT4	99	76.754	Cavia_porcellus
ENSLACG00000006206	-	99	78.509	ENSCCAG00000027437	ZMAT4	99	78.509	Cebus_capucinus
ENSLACG00000006206	-	99	78.509	ENSCATG00000044978	ZMAT4	99	78.509	Cercocebus_atys
ENSLACG00000006206	-	99	77.193	ENSCLAG00000000923	ZMAT4	99	77.193	Chinchilla_lanigera
ENSLACG00000006206	-	97	78.125	ENSCSAG00000015108	ZMAT4	100	78.125	Chlorocebus_sabaeus
ENSLACG00000006206	-	99	67.982	ENSCHOG00000003755	ZMAT4	99	67.982	Choloepus_hoffmanni
ENSLACG00000006206	-	90	86.207	ENSCPBG00000002781	ZMAT4	82	86.207	Chrysemys_picta_bellii
ENSLACG00000006206	-	98	75.897	ENSCANG00000032136	ZMAT4	100	75.897	Colobus_angolensis_palliatus
ENSLACG00000006206	-	99	77.632	ENSCGRG00001016583	Zmat4	99	77.632	Cricetulus_griseus_chok1gshd
ENSLACG00000006206	-	99	77.632	ENSCGRG00000002696	Zmat4	99	77.632	Cricetulus_griseus_crigri
ENSLACG00000006206	-	99	75.217	ENSCSEG00000013707	zmat4a	97	75.217	Cynoglossus_semilaevis
ENSLACG00000006206	-	99	75.217	ENSCVAG00000000113	zmat4a	88	75.217	Cyprinodon_variegatus
ENSLACG00000006206	-	99	74.348	ENSDARG00000092987	zmat4a	99	73.362	Danio_rerio
ENSLACG00000006206	-	97	68.750	ENSDARG00000061419	zmat4b	99	68.750	Danio_rerio
ENSLACG00000006206	-	97	77.679	ENSDNOG00000001045	ZMAT4	100	77.679	Dasypus_novemcinctus
ENSLACG00000006206	-	99	78.070	ENSDORG00000009300	Zmat4	99	78.070	Dipodomys_ordii
ENSLACG00000006206	-	80	75.316	ENSETEG00000010474	ZMAT4	81	75.316	Echinops_telfairi
ENSLACG00000006206	-	99	78.070	ENSEASG00005010447	ZMAT4	99	78.070	Equus_asinus_asinus
ENSLACG00000006206	-	99	78.070	ENSECAG00000021550	ZMAT4	99	78.070	Equus_caballus
ENSLACG00000006206	-	97	64.732	ENSEEUG00000002565	ZMAT4	100	64.732	Erinaceus_europaeus
ENSLACG00000006206	-	99	75.217	ENSELUG00000005097	zmat4a	99	75.785	Esox_lucius
ENSLACG00000006206	-	99	77.632	ENSFCAG00000012775	ZMAT4	99	77.632	Felis_catus
ENSLACG00000006206	-	99	78.947	ENSFALG00000006455	ZMAT4	99	78.947	Ficedula_albicollis
ENSLACG00000006206	-	99	75.546	ENSFDAG00000015258	ZMAT4	97	75.546	Fukomys_damarensis
ENSLACG00000006206	-	98	75.155	ENSFHEG00000022872	zmat4b	99	75.336	Fundulus_heteroclitus
ENSLACG00000006206	-	97	73.991	ENSGMOG00000007950	zmat4a	99	73.991	Gadus_morhua
ENSLACG00000006206	-	99	81.140	ENSGALG00000003470	ZMAT4	99	81.140	Gallus_gallus
ENSLACG00000006206	-	99	74.348	ENSGAFG00000013149	zmat4a	100	73.568	Gambusia_affinis
ENSLACG00000006206	-	99	75.877	ENSGACG00000005515	zmat4a	99	75.877	Gasterosteus_aculeatus
ENSLACG00000006206	-	99	80.702	ENSGAGG00000004799	ZMAT4	99	80.702	Gopherus_agassizii
ENSLACG00000006206	-	99	78.509	ENSGGOG00000006633	ZMAT4	99	78.509	Gorilla_gorilla
ENSLACG00000006206	-	99	76.087	ENSHBUG00000012634	zmat4a	88	76.087	Haplochromis_burtoni
ENSLACG00000006206	-	99	75.877	ENSHGLG00000003246	ZMAT4	99	75.877	Heterocephalus_glaber_female
ENSLACG00000006206	-	80	72.785	ENSHGLG00100000081	ZMAT4	100	72.785	Heterocephalus_glaber_male
ENSLACG00000006206	-	74	81.739	ENSHCOG00000006516	zmat4b	92	81.739	Hippocampus_comes
ENSLACG00000006206	-	99	70.940	ENSIPUG00000022248	zmat4	99	71.053	Ictalurus_punctatus
ENSLACG00000006206	-	55	68.519	ENSSTOG00000026946	-	93	70.093	Ictidomys_tridecemlineatus
ENSLACG00000006206	-	99	75.439	ENSJJAG00000013484	Zmat4	99	75.439	Jaculus_jaculus
ENSLACG00000006206	-	98	75.664	ENSLOCG00000015435	zmat4b	99	75.664	Lepisosteus_oculatus
ENSLACG00000006206	-	97	76.889	ENSLAFG00000014753	ZMAT4	100	76.889	Loxodonta_africana
ENSLACG00000006206	-	99	78.509	ENSMFAG00000043475	ZMAT4	99	78.509	Macaca_fascicularis
ENSLACG00000006206	-	98	75.897	ENSMMUG00000000776	ZMAT4	100	75.897	Macaca_mulatta
ENSLACG00000006206	-	99	78.509	ENSMNEG00000042102	ZMAT4	99	78.509	Macaca_nemestrina
ENSLACG00000006206	-	99	78.509	ENSMLEG00000034448	ZMAT4	99	78.509	Mandrillus_leucophaeus
ENSLACG00000006206	-	99	75.439	ENSMAMG00000019914	zmat4a	81	75.439	Mastacembelus_armatus
ENSLACG00000006206	-	99	76.087	ENSMZEG00005004946	zmat4a	88	76.087	Maylandia_zebra
ENSLACG00000006206	-	99	77.632	ENSMGAG00000002288	ZMAT4	99	77.632	Meleagris_gallopavo
ENSLACG00000006206	-	52	72.549	ENSMAUG00000017272	-	94	72.381	Mesocricetus_auratus
ENSLACG00000006206	-	98	74.872	ENSMICG00000047837	ZMAT4	100	74.872	Microcebus_murinus
ENSLACG00000006206	-	99	77.193	ENSMOCG00000015996	Zmat4	99	77.193	Microtus_ochrogaster
ENSLACG00000006206	-	99	76.087	ENSMMOG00000012619	zmat4a	79	85.185	Mola_mola
ENSLACG00000006206	-	99	76.884	ENSMODG00000010499	ZMAT4	99	76.884	Monodelphis_domestica
ENSLACG00000006206	-	99	73.913	ENSMALG00000015056	zmat4a	88	73.913	Monopterus_albus
ENSLACG00000006206	-	99	76.316	MGP_CAROLIEiJ_G0030909	Zmat4	100	87.500	Mus_caroli
ENSLACG00000006206	-	99	76.316	ENSMUSG00000037492	Zmat4	100	87.500	Mus_musculus
ENSLACG00000006206	-	99	76.316	MGP_PahariEiJ_G0021380	Zmat4	100	87.500	Mus_pahari
ENSLACG00000006206	-	99	76.316	MGP_SPRETEiJ_G0032028	Zmat4	100	87.500	Mus_spretus
ENSLACG00000006206	-	98	76.211	ENSMPUG00000005832	ZMAT4	80	76.211	Mustela_putorius_furo
ENSLACG00000006206	-	68	70.149	ENSMLUG00000014209	ZMAT4	98	70.149	Myotis_lucifugus
ENSLACG00000006206	-	99	77.193	ENSNGAG00000015545	Zmat4	99	77.193	Nannospalax_galili
ENSLACG00000006206	-	97	75.785	ENSNBRG00000011844	zmat4a	99	75.785	Neolamprologus_brichardi
ENSLACG00000006206	-	99	78.509	ENSNLEG00000012564	ZMAT4	99	78.509	Nomascus_leucogenys
ENSLACG00000006206	-	97	78.855	ENSMEUG00000000558	ZMAT4	100	78.855	Notamacropus_eugenii
ENSLACG00000006206	-	99	78.070	ENSOPRG00000009257	ZMAT4	99	78.070	Ochotona_princeps
ENSLACG00000006206	-	99	77.193	ENSODEG00000006439	ZMAT4	99	77.193	Octodon_degus
ENSLACG00000006206	-	92	71.809	ENSONIG00000016086	zmat4a	99	71.809	Oreochromis_niloticus
ENSLACG00000006206	-	99	34.314	ENSONIG00000020374	-	52	36.364	Oreochromis_niloticus
ENSLACG00000006206	-	95	89.655	ENSOANG00000022431	ZMAT4	100	89.655	Ornithorhynchus_anatinus
ENSLACG00000006206	-	99	78.070	ENSOCUG00000000977	ZMAT4	99	78.070	Oryctolagus_cuniculus
ENSLACG00000006206	-	88	85.185	ENSORLG00000016169	zmat4b	90	85.185	Oryzias_latipes
ENSLACG00000006206	-	99	74.138	ENSORLG00020019602	zmat4a	99	74.138	Oryzias_latipes_hni
ENSLACG00000006206	-	99	74.138	ENSORLG00015009006	zmat4a	99	74.138	Oryzias_latipes_hsok
ENSLACG00000006206	-	99	74.138	ENSOMEG00000003441	zmat4a	94	75.111	Oryzias_melastigma
ENSLACG00000006206	-	97	77.679	ENSOGAG00000012558	ZMAT4	100	77.679	Otolemur_garnettii
ENSLACG00000006206	-	97	77.679	ENSOARG00000002354	ZMAT4	84	77.679	Ovis_aries
ENSLACG00000006206	-	97	77.679	ENSPPAG00000042573	ZMAT4	99	77.679	Pan_paniscus
ENSLACG00000006206	-	99	77.632	ENSPPRG00000007023	ZMAT4	99	77.632	Panthera_pardus
ENSLACG00000006206	-	99	77.632	ENSPTIG00000019738	ZMAT4	99	77.632	Panthera_tigris_altaica
ENSLACG00000006206	-	99	78.070	ENSPTRG00000020191	ZMAT4	99	78.070	Pan_troglodytes
ENSLACG00000006206	-	99	78.509	ENSPANG00000014196	ZMAT4	99	78.509	Papio_anubis
ENSLACG00000006206	-	99	76.957	ENSPKIG00000000048	zmat4a	88	76.957	Paramormyrops_kingsleyae
ENSLACG00000006206	-	97	57.647	ENSPKIG00000021792	zmat4b	99	57.647	Paramormyrops_kingsleyae
ENSLACG00000006206	-	99	80.702	ENSPSIG00000004847	ZMAT4	99	80.702	Pelodiscus_sinensis
ENSLACG00000006206	-	97	69.333	ENSPMGG00000001436	zmat4b	99	69.333	Periophthalmus_magnuspinnatus
ENSLACG00000006206	-	97	49.339	ENSPMAG00000004582	zmat4a	97	49.339	Petromyzon_marinus
ENSLACG00000006206	-	99	78.696	ENSPCIG00000028706	ZMAT4	96	75.879	Phascolarctos_cinereus
ENSLACG00000006206	-	99	75.217	ENSPFOG00000006742	zmat4a	88	75.217	Poecilia_formosa
ENSLACG00000006206	-	97	75.785	ENSPLAG00000019268	zmat4a	88	75.785	Poecilia_latipinna
ENSLACG00000006206	-	100	74.892	ENSPMEG00000007870	zmat4a	99	75.217	Poecilia_mexicana
ENSLACG00000006206	-	99	75.217	ENSPREG00000014914	zmat4a	88	75.217	Poecilia_reticulata
ENSLACG00000006206	-	99	78.070	ENSPPYG00000018540	ZMAT4	99	78.070	Pongo_abelii
ENSLACG00000006206	-	99	76.316	ENSPCAG00000004820	ZMAT4	99	76.316	Procavia_capensis
ENSLACG00000006206	-	99	78.070	ENSPCOG00000007717	ZMAT4	99	78.070	Propithecus_coquereli
ENSLACG00000006206	-	83	77.083	ENSPVAG00000011393	ZMAT4	84	77.083	Pteropus_vampyrus
ENSLACG00000006206	-	99	76.522	ENSPNYG00000006173	zmat4a	81	76.522	Pundamilia_nyererei
ENSLACG00000006206	-	99	67.544	ENSPNAG00000023764	zmat4b	99	67.544	Pygocentrus_nattereri
ENSLACG00000006206	-	99	74.348	ENSPNAG00000009604	zmat4a	88	74.348	Pygocentrus_nattereri
ENSLACG00000006206	-	99	74.783	ENSRNOG00000042690	Zmat4	99	74.783	Rattus_norvegicus
ENSLACG00000006206	-	99	78.509	ENSRBIG00000031887	ZMAT4	99	78.509	Rhinopithecus_bieti
ENSLACG00000006206	-	99	78.509	ENSRROG00000040877	ZMAT4	99	78.509	Rhinopithecus_roxellana
ENSLACG00000006206	-	99	78.509	ENSSBOG00000017391	ZMAT4	99	78.509	Saimiri_boliviensis_boliviensis
ENSLACG00000006206	-	91	68.780	ENSSHAG00000011847	ZMAT4	99	69.417	Sarcophilus_harrisii
ENSLACG00000006206	-	99	74.783	ENSSFOG00015013158	zmat4	100	74.459	Scleropages_formosus
ENSLACG00000006206	-	72	76.415	ENSSFOG00015015440	zmat4b	87	76.415	Scleropages_formosus
ENSLACG00000006206	-	100	75.758	ENSSMAG00000017693	zmat4a	99	75.000	Scophthalmus_maximus
ENSLACG00000006206	-	99	76.087	ENSSDUG00000005878	zmat4a	88	76.087	Seriola_dumerili
ENSLACG00000006206	-	99	76.087	ENSSLDG00000012934	zmat4a	88	76.087	Seriola_lalandi_dorsalis
ENSLACG00000006206	-	99	72.368	ENSSARG00000003679	ZMAT4	99	72.368	Sorex_araneus
ENSLACG00000006206	-	97	77.130	ENSSPAG00000021408	zmat4a	83	77.130	Stegastes_partitus
ENSLACG00000006206	-	99	78.509	ENSSSCG00000007010	ZMAT4	99	78.509	Sus_scrofa
ENSLACG00000006206	-	97	80.357	ENSTGUG00000005159	ZMAT4	100	80.357	Taeniopygia_guttata
ENSLACG00000006206	-	99	74.348	ENSTRUG00000005170	zmat4a	76	74.348	Takifugu_rubripes
ENSLACG00000006206	-	97	67.257	ENSTNIG00000018863	zmat4b	99	67.257	Tetraodon_nigroviridis
ENSLACG00000006206	-	99	65.351	ENSTBEG00000016172	ZMAT4	99	65.351	Tupaia_belangeri
ENSLACG00000006206	-	99	73.684	ENSTTRG00000009606	ZMAT4	99	73.684	Tursiops_truncatus
ENSLACG00000006206	-	97	77.232	ENSUMAG00000025578	ZMAT4	99	77.232	Ursus_maritimus
ENSLACG00000006206	-	99	68.831	ENSVPAG00000009783	ZMAT4	99	68.831	Vicugna_pacos
ENSLACG00000006206	-	99	77.632	ENSVVUG00000020407	ZMAT4	99	77.632	Vulpes_vulpes
ENSLACG00000006206	-	97	39.394	ENSXCOG00000010189	-	99	40.088	Xiphophorus_couchianus
ENSLACG00000006206	-	51	61.789	ENSXCOG00000015061	zmat4b	85	61.789	Xiphophorus_couchianus
ENSLACG00000006206	-	99	74.783	ENSXMAG00000010461	zmat4a	88	74.783	Xiphophorus_maculatus