EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000006277 (Gene tree)
Gene ID: 102350452
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 72178 bases
Position: chrJH127014.1:209925-282102
Accession: 102350452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007075	Ago_hook	PF10427.9	8.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007134	TNRC6A-201	7590	XM_005998480	ENSLACP00000007075	1879 (aa)	-	H3ABQ4

Gene Model

Click here to download ENSLACG00000006277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000006277	TNRC6A	93	42.251	ENSLACG00000015283	TNRC6C	100	42.283
ENSLACG00000006277	TNRC6A	90	36.933	ENSLACG00000000628	-	73	33.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006277	TNRC6A	100	70.258	ENSG00000090905	TNRC6A	100	83.125	Homo_sapiens
ENSLACG00000006277	TNRC6A	100	70.691	ENSAMEG00000009333	TNRC6A	99	70.485	Ailuropoda_melanoleuca
ENSLACG00000006277	TNRC6A	100	75.537	ENSAPLG00000009978	TNRC6A	100	75.223	Anas_platyrhynchos
ENSLACG00000006277	TNRC6A	98	51.668	ENSACAG00000011857	TNRC6A	96	52.183	Anolis_carolinensis
ENSLACG00000006277	TNRC6A	100	70.181	ENSANAG00000025252	TNRC6A	98	69.299	Aotus_nancymaae
ENSLACG00000006277	TNRC6A	94	59.479	ENSAMXG00000019919	tnrc6a	99	59.261	Astyanax_mexicanus
ENSLACG00000006277	TNRC6A	100	70.274	ENSBTAG00000017999	TNRC6A	99	69.549	Bos_taurus
ENSLACG00000006277	TNRC6A	100	69.733	ENSCJAG00000020677	TNRC6A	97	68.705	Callithrix_jacchus
ENSLACG00000006277	TNRC6A	100	70.728	ENSCAFG00000017531	TNRC6A	97	69.954	Canis_familiaris
ENSLACG00000006277	TNRC6A	100	69.799	ENSCAFG00020021160	TNRC6A	99	69.024	Canis_lupus_dingo
ENSLACG00000006277	TNRC6A	99	67.705	ENSCHIG00000019448	TNRC6A	97	68.230	Capra_hircus
ENSLACG00000006277	TNRC6A	100	70.093	ENSTSYG00000012711	TNRC6A	99	69.370	Carlito_syrichta
ENSLACG00000006277	TNRC6A	100	67.913	ENSCPOG00000036684	TNRC6A	97	67.549	Cavia_porcellus
ENSLACG00000006277	TNRC6A	100	70.212	ENSCCAG00000033664	TNRC6A	99	69.179	Cebus_capucinus
ENSLACG00000006277	TNRC6A	100	69.424	ENSCATG00000019284	TNRC6A	97	68.756	Cercocebus_atys
ENSLACG00000006277	TNRC6A	99	65.821	ENSCLAG00000010217	TNRC6A	97	65.769	Chinchilla_lanigera
ENSLACG00000006277	TNRC6A	100	70.330	ENSCSAG00000006561	TNRC6A	97	69.659	Chlorocebus_sabaeus
ENSLACG00000006277	TNRC6A	95	68.474	ENSCHOG00000009374	TNRC6A	92	67.805	Choloepus_hoffmanni
ENSLACG00000006277	TNRC6A	95	73.126	ENSCPBG00000001881	TNRC6A	99	73.071	Chrysemys_picta_bellii
ENSLACG00000006277	TNRC6A	100	70.455	ENSCANG00000041549	TNRC6A	97	69.783	Colobus_angolensis_palliatus
ENSLACG00000006277	TNRC6A	100	69.741	ENSCGRG00001015021	Tnrc6a	99	69.378	Cricetulus_griseus_chok1gshd
ENSLACG00000006277	TNRC6A	100	67.236	ENSCGRG00000013351	Tnrc6a	97	67.184	Cricetulus_griseus_crigri
ENSLACG00000006277	TNRC6A	94	60.251	ENSDARG00000079688	tnrc6a	99	60.414	Danio_rerio
ENSLACG00000006277	TNRC6A	100	69.299	ENSDNOG00000013989	TNRC6A	99	68.623	Dasypus_novemcinctus
ENSLACG00000006277	TNRC6A	100	63.226	ENSETEG00000014658	TNRC6A	99	62.967	Echinops_telfairi
ENSLACG00000006277	TNRC6A	100	70.415	ENSEASG00005017693	TNRC6A	99	69.845	Equus_asinus_asinus
ENSLACG00000006277	TNRC6A	100	70.415	ENSECAG00000025056	TNRC6A	99	69.845	Equus_caballus
ENSLACG00000006277	TNRC6A	100	65.379	ENSEEUG00000004530	TNRC6A	99	64.657	Erinaceus_europaeus
ENSLACG00000006277	TNRC6A	100	70.512	ENSFCAG00000025236	TNRC6A	99	69.736	Felis_catus
ENSLACG00000006277	TNRC6A	100	73.191	ENSFALG00000003757	TNRC6A	97	73.191	Ficedula_albicollis
ENSLACG00000006277	TNRC6A	95	73.307	ENSGALG00000006068	TNRC6A	99	73.196	Gallus_gallus
ENSLACG00000006277	TNRC6A	95	72.400	ENSGAGG00000023209	TNRC6A	99	72.622	Gopherus_agassizii
ENSLACG00000006277	TNRC6A	100	70.103	ENSGGOG00000005137	TNRC6A	99	69.433	Gorilla_gorilla
ENSLACG00000006277	TNRC6A	98	54.287	ENSHGLG00000007368	-	93	54.097	Heterocephalus_glaber_female
ENSLACG00000006277	TNRC6A	99	67.048	ENSHGLG00000012474	-	97	66.528	Heterocephalus_glaber_female
ENSLACG00000006277	TNRC6A	99	67.737	ENSHGLG00100012496	-	97	67.158	Heterocephalus_glaber_male
ENSLACG00000006277	TNRC6A	100	69.686	ENSSTOG00000023394	TNRC6A	96	68.914	Ictidomys_tridecemlineatus
ENSLACG00000006277	TNRC6A	99	85.714	ENSLOCG00000005517	tnrc6a	90	85.714	Lepisosteus_oculatus
ENSLACG00000006277	TNRC6A	100	68.224	ENSLAFG00000004209	TNRC6A	99	67.757	Loxodonta_africana
ENSLACG00000006277	TNRC6A	100	69.322	ENSMFAG00000003824	TNRC6A	99	68.654	Macaca_fascicularis
ENSLACG00000006277	TNRC6A	100	70.351	ENSMMUG00000020428	TNRC6A	97	69.628	Macaca_mulatta
ENSLACG00000006277	TNRC6A	100	70.144	ENSMNEG00000034854	TNRC6A	99	68.638	Macaca_nemestrina
ENSLACG00000006277	TNRC6A	100	69.247	ENSMLEG00000042737	TNRC6A	97	68.580	Mandrillus_leucophaeus
ENSLACG00000006277	TNRC6A	98	75.642	ENSMGAG00000006455	TNRC6A	94	74.933	Meleagris_gallopavo
ENSLACG00000006277	TNRC6A	100	67.809	ENSMAUG00000012750	Tnrc6a	97	67.705	Mesocricetus_auratus
ENSLACG00000006277	TNRC6A	100	70.412	ENSMICG00000030685	TNRC6A	98	69.691	Microcebus_murinus
ENSLACG00000006277	TNRC6A	100	68.139	ENSMOCG00000000152	Tnrc6a	97	67.983	Microtus_ochrogaster
ENSLACG00000006277	TNRC6A	100	72.462	ENSMODG00000016348	TNRC6A	96	72.410	Monodelphis_domestica
ENSLACG00000006277	TNRC6A	100	67.552	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	71.992	Mus_caroli
ENSLACG00000006277	TNRC6A	100	67.723	ENSMUSG00000052707	Tnrc6a	99	72.132	Mus_musculus
ENSLACG00000006277	TNRC6A	100	67.688	MGP_PahariEiJ_G0013635	Tnrc6a	99	71.921	Mus_pahari
ENSLACG00000006277	TNRC6A	100	69.459	MGP_SPRETEiJ_G0031539	Tnrc6a	99	71.710	Mus_spretus
ENSLACG00000006277	TNRC6A	100	62.487	ENSMPUG00000012324	TNRC6A	100	62.069	Mustela_putorius_furo
ENSLACG00000006277	TNRC6A	100	69.606	ENSMLUG00000002701	TNRC6A	100	68.880	Myotis_lucifugus
ENSLACG00000006277	TNRC6A	100	67.979	ENSNGAG00000020702	Tnrc6a	97	67.306	Nannospalax_galili
ENSLACG00000006277	TNRC6A	100	68.459	ENSNLEG00000011851	TNRC6A	98	67.787	Nomascus_leucogenys
ENSLACG00000006277	TNRC6A	77	77.149	ENSMEUG00000015959	-	74	76.170	Notamacropus_eugenii
ENSLACG00000006277	TNRC6A	96	84.328	ENSOPRG00000005819	TNRC6A	93	84.328	Ochotona_princeps
ENSLACG00000006277	TNRC6A	99	65.849	ENSODEG00000012802	TNRC6A	97	65.571	Octodon_degus
ENSLACG00000006277	TNRC6A	91	74.384	ENSOANG00000007672	TNRC6A	99	73.890	Ornithorhynchus_anatinus
ENSLACG00000006277	TNRC6A	100	69.848	ENSOCUG00000004325	TNRC6A	100	69.061	Oryctolagus_cuniculus
ENSLACG00000006277	TNRC6A	100	70.600	ENSOGAG00000006666	TNRC6A	98	69.876	Otolemur_garnettii
ENSLACG00000006277	TNRC6A	100	69.231	ENSOARG00000017950	TNRC6A	98	68.541	Ovis_aries
ENSLACG00000006277	TNRC6A	100	69.974	ENSPPAG00000028379	TNRC6A	99	69.306	Pan_paniscus
ENSLACG00000006277	TNRC6A	100	70.512	ENSPPRG00000005861	TNRC6A	97	69.736	Panthera_pardus
ENSLACG00000006277	TNRC6A	100	69.964	ENSPTIG00000006346	TNRC6A	97	69.861	Panthera_tigris_altaica
ENSLACG00000006277	TNRC6A	100	70.041	ENSPTRG00000007898	TNRC6A	99	69.322	Pan_troglodytes
ENSLACG00000006277	TNRC6A	100	67.988	ENSPANG00000018523	TNRC6A	99	66.735	Papio_anubis
ENSLACG00000006277	TNRC6A	92	75.455	ENSPKIG00000012859	tnrc6a	96	79.891	Paramormyrops_kingsleyae
ENSLACG00000006277	TNRC6A	81	67.871	ENSPSIG00000003965	TNRC6A	100	67.806	Pelodiscus_sinensis
ENSLACG00000006277	TNRC6A	100	67.809	ENSPEMG00000016318	Tnrc6a	97	67.342	Peromyscus_maniculatus_bairdii
ENSLACG00000006277	TNRC6A	100	73.913	ENSPCIG00000012106	TNRC6A	99	73.704	Phascolarctos_cinereus
ENSLACG00000006277	TNRC6A	100	69.876	ENSPPYG00000007202	TNRC6A	97	68.950	Pongo_abelii
ENSLACG00000006277	TNRC6A	93	79.381	ENSPCAG00000008260	TNRC6A	91	79.381	Procavia_capensis
ENSLACG00000006277	TNRC6A	100	68.231	ENSPCOG00000010134	TNRC6A	97	67.715	Propithecus_coquereli
ENSLACG00000006277	TNRC6A	89	55.653	ENSPVAG00000012066	TNRC6A	97	55.653	Pteropus_vampyrus
ENSLACG00000006277	TNRC6A	99	69.044	ENSRNOG00000024737	Tnrc6a	97	68.527	Rattus_norvegicus
ENSLACG00000006277	TNRC6A	100	70.300	ENSRBIG00000014222	TNRC6A	99	69.628	Rhinopithecus_bieti
ENSLACG00000006277	TNRC6A	100	70.497	ENSRROG00000032360	TNRC6A	97	69.824	Rhinopithecus_roxellana
ENSLACG00000006277	TNRC6A	100	70.705	ENSSBOG00000036197	TNRC6A	99	70.486	Saimiri_boliviensis_boliviensis
ENSLACG00000006277	TNRC6A	95	71.280	ENSSHAG00000008811	TNRC6A	99	71.280	Sarcophilus_harrisii
ENSLACG00000006277	TNRC6A	94	83.257	ENSSFOG00015008920	tnrc6a	96	83.221	Scleropages_formosus
ENSLACG00000006277	TNRC6A	74	59.155	ENSSARG00000002479	TNRC6A	89	57.570	Sorex_araneus
ENSLACG00000006277	TNRC6A	94	71.993	ENSSPUG00000010525	TNRC6A	99	71.938	Sphenodon_punctatus
ENSLACG00000006277	TNRC6A	100	67.885	ENSSSCG00000038870	TNRC6A	99	71.238	Sus_scrofa
ENSLACG00000006277	TNRC6A	100	71.549	ENSTGUG00000006142	TNRC6A	97	71.654	Taeniopygia_guttata
ENSLACG00000006277	TNRC6A	100	67.973	ENSTBEG00000014965	TNRC6A	99	67.509	Tupaia_belangeri
ENSLACG00000006277	TNRC6A	93	75.398	ENSTTRG00000002008	TNRC6A	90	74.549	Tursiops_truncatus
ENSLACG00000006277	TNRC6A	82	65.016	ENSUAMG00000006656	-	93	64.825	Ursus_americanus
ENSLACG00000006277	TNRC6A	100	70.665	ENSUMAG00000008274	TNRC6A	100	70.605	Ursus_maritimus
ENSLACG00000006277	TNRC6A	55	65.180	ENSVPAG00000010764	-	55	64.091	Vicugna_pacos
ENSLACG00000006277	TNRC6A	96	86.486	ENSVVUG00000005380	TNRC6A	99	69.747	Vulpes_vulpes
ENSLACG00000006277	TNRC6A	98	63.665	ENSXETG00000030437	TNRC6A	99	63.186	Xenopus_tropicalis