EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000006357 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2358 bases
Position: chrJH129198.1:214059-216416
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007166	RVT_1	PF00078.27	1.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007225	-	2313	-	ENSLACP00000007166	771 (aa)	-	H3ABZ5

Gene Model

Click here to download ENSLACG00000006357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000006357	-	67	74.432	ENSLACG00000009240	-	93	74.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006357	-	99	30.712	ENSACIG00000012161	-	70	30.712	Amphilophus_citrinellus
ENSLACG00000006357	-	95	34.483	ENSACIG00000013116	-	75	34.483	Amphilophus_citrinellus
ENSLACG00000006357	-	95	34.100	ENSACIG00000007038	-	69	33.666	Amphilophus_citrinellus
ENSLACG00000006357	-	93	31.200	ENSACIG00000010787	-	68	31.200	Amphilophus_citrinellus
ENSLACG00000006357	-	99	33.578	ENSACIG00000009025	-	89	33.578	Amphilophus_citrinellus
ENSLACG00000006357	-	97	38.726	ENSAMXG00000042811	-	67	38.726	Astyanax_mexicanus
ENSLACG00000006357	-	97	40.075	ENSCPBG00000003842	-	60	40.075	Chrysemys_picta_bellii
ENSLACG00000006357	-	96	34.153	ENSCVAG00000004138	-	73	34.153	Cyprinodon_variegatus
ENSLACG00000006357	-	95	32.474	ENSELUG00000004597	-	79	32.817	Esox_lucius
ENSLACG00000006357	-	96	32.785	ENSFHEG00000022106	-	72	32.785	Fundulus_heteroclitus
ENSLACG00000006357	-	91	33.154	ENSFHEG00000007211	-	74	32.234	Fundulus_heteroclitus
ENSLACG00000006357	-	96	32.124	ENSFHEG00000002853	-	71	32.124	Fundulus_heteroclitus
ENSLACG00000006357	-	96	30.268	ENSFHEG00000002865	-	65	30.268	Fundulus_heteroclitus
ENSLACG00000006357	-	73	30.948	ENSGMOG00000005227	-	100	30.948	Gadus_morhua
ENSLACG00000006357	-	54	32.051	ENSGACG00000000426	-	89	32.051	Gasterosteus_aculeatus
ENSLACG00000006357	-	54	34.894	ENSGACG00000015045	-	92	34.894	Gasterosteus_aculeatus
ENSLACG00000006357	-	98	35.544	ENSHCOG00000000471	-	66	35.544	Hippocampus_comes
ENSLACG00000006357	-	96	34.336	ENSHCOG00000007389	-	73	34.336	Hippocampus_comes
ENSLACG00000006357	-	97	31.091	ENSHCOG00000007436	-	71	31.091	Hippocampus_comes
ENSLACG00000006357	-	99	35.323	ENSHCOG00000007397	-	71	35.323	Hippocampus_comes
ENSLACG00000006357	-	81	34.251	ENSLBEG00000003745	-	78	34.251	Labrus_bergylta
ENSLACG00000006357	-	77	34.300	ENSLBEG00000004576	-	72	34.300	Labrus_bergylta
ENSLACG00000006357	-	99	38.224	ENSLOCG00000011928	-	71	38.224	Lepisosteus_oculatus
ENSLACG00000006357	-	99	38.998	ENSLOCG00000017064	-	73	38.998	Lepisosteus_oculatus
ENSLACG00000006357	-	64	39.922	ENSLOCG00000002743	-	99	39.922	Lepisosteus_oculatus
ENSLACG00000006357	-	98	34.125	ENSMAMG00000019985	-	66	34.956	Mastacembelus_armatus
ENSLACG00000006357	-	95	34.720	ENSONIG00000020875	-	66	34.720	Oreochromis_niloticus
ENSLACG00000006357	-	95	31.675	ENSOMEG00000015368	-	71	31.545	Oryzias_melastigma
ENSLACG00000006357	-	97	33.673	ENSPMGG00000017392	-	83	33.673	Periophthalmus_magnuspinnatus
ENSLACG00000006357	-	76	35.314	ENSPMGG00000001593	-	63	35.314	Periophthalmus_magnuspinnatus
ENSLACG00000006357	-	95	33.156	ENSPLAG00000011817	-	75	33.156	Poecilia_latipinna
ENSLACG00000006357	-	95	34.127	ENSPLAG00000023379	-	91	34.127	Poecilia_latipinna
ENSLACG00000006357	-	98	34.474	ENSPLAG00000022994	-	73	34.474	Poecilia_latipinna
ENSLACG00000006357	-	98	34.474	ENSPLAG00000011810	-	73	34.474	Poecilia_latipinna
ENSLACG00000006357	-	95	34.437	ENSPMEG00000003431	-	73	34.437	Poecilia_mexicana
ENSLACG00000006357	-	95	31.711	ENSPMEG00000008574	-	70	31.711	Poecilia_mexicana
ENSLACG00000006357	-	97	33.291	ENSPREG00000012484	-	68	33.291	Poecilia_reticulata
ENSLACG00000006357	-	97	32.250	ENSPREG00000005756	-	71	32.250	Poecilia_reticulata
ENSLACG00000006357	-	99	31.931	ENSPREG00000005456	-	67	31.931	Poecilia_reticulata
ENSLACG00000006357	-	96	35.670	ENSPNAG00000003539	-	65	35.670	Pygocentrus_nattereri
ENSLACG00000006357	-	95	34.717	ENSPNAG00000007038	-	65	34.969	Pygocentrus_nattereri
ENSLACG00000006357	-	80	33.634	ENSPNAG00000017596	-	68	33.634	Pygocentrus_nattereri
ENSLACG00000006357	-	97	34.696	ENSPNAG00000016635	-	67	34.696	Pygocentrus_nattereri
ENSLACG00000006357	-	98	34.479	ENSPNAG00000021754	-	68	34.479	Pygocentrus_nattereri
ENSLACG00000006357	-	99	33.829	ENSXCOG00000008881	-	89	33.829	Xiphophorus_couchianus
ENSLACG00000006357	-	96	38.089	ENSXCOG00000013093	-	67	38.089	Xiphophorus_couchianus
ENSLACG00000006357	-	99	32.671	ENSXMAG00000028672	-	72	32.671	Xiphophorus_maculatus