EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000006373 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 39597 bases
Position: chrJH128699.1:214913-254509
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007183	RNase_Zc3h12a	PF11977.8	4.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007242	-	2730	-	ENSLACP00000007183	910 (aa)	-	H3AC12

Gene Model

Click here to download ENSLACG00000006373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000006373	-	68	40.764	ENSLACG00000014946	N4BP1	75	40.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006373	-	84	43.925	ENSAPOG00000018166	khnyn	90	43.925	Acanthochromis_polyacanthus
ENSLACG00000006373	-	82	45.960	ENSACIG00000009218	khnyn	87	45.500	Amphilophus_citrinellus
ENSLACG00000006373	-	87	33.971	ENSAOCG00000013591	khnyn	99	32.265	Amphiprion_ocellaris
ENSLACG00000006373	-	74	44.860	ENSAPEG00000016644	khnyn	92	44.860	Amphiprion_percula
ENSLACG00000006373	-	83	44.390	ENSATEG00000012736	khnyn	87	44.390	Anabas_testudineus
ENSLACG00000006373	-	83	44.272	ENSACAG00000009105	-	88	44.272	Anolis_carolinensis
ENSLACG00000006373	-	71	45.320	ENSACLG00000023145	khnyn	87	45.320	Astatotilapia_calliptera
ENSLACG00000006373	-	67	42.021	ENSAMXG00000021804	khnyn	65	42.021	Astyanax_mexicanus
ENSLACG00000006373	-	98	37.975	ENSCPBG00000025553	-	99	38.340	Chrysemys_picta_bellii
ENSLACG00000006373	-	55	46.500	ENSCSEG00000017737	khnyn	65	46.500	Cynoglossus_semilaevis
ENSLACG00000006373	-	83	45.545	ENSCVAG00000015749	khnyn	86	45.545	Cyprinodon_variegatus
ENSLACG00000006373	-	82	42.708	ENSDARG00000092488	khnyn	90	42.708	Danio_rerio
ENSLACG00000006373	-	79	40.865	ENSELUG00000001159	khnyn	93	32.013	Esox_lucius
ENSLACG00000006373	-	99	31.640	ENSFHEG00000020389	khnyn	99	31.710	Fundulus_heteroclitus
ENSLACG00000006373	-	55	38.188	ENSGMOG00000017611	khnyn	70	38.511	Gadus_morhua
ENSLACG00000006373	-	83	45.411	ENSGAFG00000006881	khnyn	87	45.498	Gambusia_affinis
ENSLACG00000006373	-	68	44.019	ENSGACG00000018867	khnyn	85	45.714	Gasterosteus_aculeatus
ENSLACG00000006373	-	71	45.320	ENSHBUG00000022657	khnyn	88	45.320	Haplochromis_burtoni
ENSLACG00000006373	-	83	42.574	ENSIPUG00000010080	khnyn	84	42.574	Ictalurus_punctatus
ENSLACG00000006373	-	71	46.535	ENSKMAG00000004051	khnyn	74	46.535	Kryptolebias_marmoratus
ENSLACG00000006373	-	83	43.902	ENSLBEG00000022360	khnyn	87	43.902	Labrus_bergylta
ENSLACG00000006373	-	84	43.119	ENSMAMG00000011231	khnyn	87	43.049	Mastacembelus_armatus
ENSLACG00000006373	-	71	45.320	ENSMZEG00005021175	khnyn	87	45.320	Maylandia_zebra
ENSLACG00000006373	-	83	46.305	ENSMALG00000008476	khnyn	99	33.008	Monopterus_albus
ENSLACG00000006373	-	83	45.320	ENSNBRG00000024210	khnyn	86	45.320	Neolamprologus_brichardi
ENSLACG00000006373	-	69	45.813	ENSONIG00000000309	khnyn	75	45.813	Oreochromis_niloticus
ENSLACG00000006373	-	54	41.117	ENSOANG00000007698	-	71	41.117	Ornithorhynchus_anatinus
ENSLACG00000006373	-	87	35.308	ENSORLG00000009076	khnyn	85	35.308	Oryzias_latipes
ENSLACG00000006373	-	86	34.958	ENSORLG00020019367	khnyn	85	34.483	Oryzias_latipes_hni
ENSLACG00000006373	-	67	51.531	ENSORLG00015020888	khnyn	77	51.531	Oryzias_latipes_hsok
ENSLACG00000006373	-	99	33.195	ENSOMEG00000019670	khnyn	99	33.613	Oryzias_melastigma
ENSLACG00000006373	-	79	32.794	ENSOMEG00000020679	-	98	32.787	Oryzias_melastigma
ENSLACG00000006373	-	70	53.886	ENSPKIG00000011871	khnyn	68	38.860	Paramormyrops_kingsleyae
ENSLACG00000006373	-	70	36.771	ENSPSIG00000011302	-	86	35.565	Pelodiscus_sinensis
ENSLACG00000006373	-	53	42.614	ENSPMGG00000012498	khnyn	81	42.718	Periophthalmus_magnuspinnatus
ENSLACG00000006373	-	83	45.894	ENSPFOG00000003345	khnyn	87	45.972	Poecilia_formosa
ENSLACG00000006373	-	83	45.894	ENSPLAG00000018743	khnyn	87	45.972	Poecilia_latipinna
ENSLACG00000006373	-	99	31.548	ENSPMEG00000022016	khnyn	90	45.972	Poecilia_mexicana
ENSLACG00000006373	-	68	46.512	ENSPREG00000009460	khnyn	69	46.512	Poecilia_reticulata
ENSLACG00000006373	-	71	45.320	ENSPNYG00000021301	khnyn	87	45.320	Pundamilia_nyererei
ENSLACG00000006373	-	60	46.809	ENSPNAG00000008440	khnyn	56	46.809	Pygocentrus_nattereri
ENSLACG00000006373	-	87	31.894	ENSSFOG00015022358	khnyn	85	31.661	Scleropages_formosus
ENSLACG00000006373	-	56	53.488	ENSSMAG00000014533	khnyn	61	53.488	Scophthalmus_maximus
ENSLACG00000006373	-	85	42.291	ENSSDUG00000014291	khnyn	89	43.439	Seriola_dumerili
ENSLACG00000006373	-	85	41.810	ENSSLDG00000008698	khnyn	89	43.439	Seriola_lalandi_dorsalis
ENSLACG00000006373	-	82	56.923	ENSSPUG00000008680	-	68	56.923	Sphenodon_punctatus
ENSLACG00000006373	-	73	45.411	ENSSPAG00000011142	khnyn	86	45.972	Stegastes_partitus
ENSLACG00000006373	-	86	33.145	ENSTRUG00000006694	khnyn	87	45.411	Takifugu_rubripes
ENSLACG00000006373	-	54	45.274	ENSTNIG00000003685	khnyn	69	45.274	Tetraodon_nigroviridis
ENSLACG00000006373	-	84	43.949	ENSXETG00000016903	khnyn	90	43.949	Xenopus_tropicalis
ENSLACG00000006373	-	68	45.972	ENSXMAG00000028172	khnyn	68	45.972	Xiphophorus_maculatus