EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000006490 (Gene tree)
Gene ID: 102363674
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 31709 bases
Position: chrJH127105.1:220813-252521
Accession: 102363674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007317	HRDC	PF00570.23	2.4e-11	1	1
ENSLACP00000007317	BDHCT	PF08072.11	2.6e-21	1	1
ENSLACP00000007317	DEAD	PF00270.29	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007377	BLM-201	4353	XM_005999701	ENSLACP00000007317	1450 (aa)	XP_005999763	H3ACE6

Gene Model

Click here to download ENSLACG00000006490's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03440	Homologous recombination	KEGG
lcm03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006490	BLM	99	51.495	ENSG00000197299	BLM	98	52.367	Homo_sapiens
ENSLACG00000006490	BLM	59	64.319	ENSAPOG00000017966	blm	62	64.319	Acanthochromis_polyacanthus
ENSLACG00000006490	BLM	58	66.906	ENSAMEG00000013843	BLM	59	66.706	Ailuropoda_melanoleuca
ENSLACG00000006490	BLM	78	54.663	ENSACIG00000023762	blm	59	65.562	Amphilophus_citrinellus
ENSLACG00000006490	BLM	59	64.245	ENSAOCG00000003318	blm	61	64.509	Amphiprion_ocellaris
ENSLACG00000006490	BLM	59	64.475	ENSAPEG00000018105	blm	60	64.393	Amphiprion_percula
ENSLACG00000006490	BLM	79	57.395	ENSAPLG00000006878	BLM	71	68.134	Anas_platyrhynchos
ENSLACG00000006490	BLM	59	67.839	ENSACAG00000014275	BLM	60	67.839	Anolis_carolinensis
ENSLACG00000006490	BLM	58	68.118	ENSANAG00000038415	BLM	99	51.188	Aotus_nancymaae
ENSLACG00000006490	BLM	87	65.995	ENSACLG00000020354	blm	87	66.114	Astatotilapia_calliptera
ENSLACG00000006490	BLM	74	65.501	ENSAMXG00000016970	blm	75	65.618	Astyanax_mexicanus
ENSLACG00000006490	BLM	54	76.169	ENSBTAG00000020301	BLM	55	76.169	Bos_taurus
ENSLACG00000006490	BLM	99	51.708	ENSCJAG00000009803	BLM	55	74.864	Callithrix_jacchus
ENSLACG00000006490	BLM	99	50.607	ENSCAFG00000012385	BLM	60	66.862	Canis_familiaris
ENSLACG00000006490	BLM	99	50.639	ENSCAFG00020016111	BLM	92	73.721	Canis_lupus_dingo
ENSLACG00000006490	BLM	99	50.809	ENSCHIG00000010329	BLM	55	75.501	Capra_hircus
ENSLACG00000006490	BLM	99	50.435	ENSTSYG00000012368	BLM	55	73.599	Carlito_syrichta
ENSLACG00000006490	BLM	77	77.857	ENSCAPG00000017976	BLM	89	77.857	Cavia_aperea
ENSLACG00000006490	BLM	58	67.925	ENSCCAG00000023069	BLM	99	50.815	Cebus_capucinus
ENSLACG00000006490	BLM	99	51.177	ENSCATG00000040609	BLM	91	75.339	Cercocebus_atys
ENSLACG00000006490	BLM	99	50.952	ENSCLAG00000012111	BLM	99	50.340	Chinchilla_lanigera
ENSLACG00000006490	BLM	99	51.839	ENSCSAG00000017040	BLM	99	51.497	Chlorocebus_sabaeus
ENSLACG00000006490	BLM	52	56.429	ENSCHOG00000006255	BLM	54	56.429	Choloepus_hoffmanni
ENSLACG00000006490	BLM	79	56.489	ENSCPBG00000025000	BLM	86	73.706	Chrysemys_picta_bellii
ENSLACG00000006490	BLM	88	40.632	ENSCANG00000034808	BLM	100	40.321	Colobus_angolensis_palliatus
ENSLACG00000006490	BLM	58	67.689	ENSCGRG00001024897	Blm	60	67.256	Cricetulus_griseus_chok1gshd
ENSLACG00000006490	BLM	89	48.770	ENSCSEG00000013483	blm	64	63.647	Cynoglossus_semilaevis
ENSLACG00000006490	BLM	97	63.791	ENSDARG00000077089	blm	86	64.781	Danio_rerio
ENSLACG00000006490	BLM	58	66.745	ENSDORG00000011033	Blm	81	66.981	Dipodomys_ordii
ENSLACG00000006490	BLM	57	54.737	ENSETEG00000015019	BLM	58	54.737	Echinops_telfairi
ENSLACG00000006490	BLM	99	48.299	ENSEASG00005006727	BLM	59	63.477	Equus_asinus_asinus
ENSLACG00000006490	BLM	99	50.267	ENSECAG00000011405	BLM	59	66.978	Equus_caballus
ENSLACG00000006490	BLM	85	66.861	ENSEEUG00000001434	BLM	85	66.861	Erinaceus_europaeus
ENSLACG00000006490	BLM	89	68.546	ENSELUG00000019098	blm	83	68.546	Esox_lucius
ENSLACG00000006490	BLM	58	67.373	ENSFCAG00000006087	BLM	55	74.819	Felis_catus
ENSLACG00000006490	BLM	79	54.780	ENSFALG00000010981	BLM	63	68.381	Ficedula_albicollis
ENSLACG00000006490	BLM	94	64.037	ENSFDAG00000012658	BLM	56	68.966	Fukomys_damarensis
ENSLACG00000006490	BLM	67	64.598	ENSFHEG00000002553	blm	66	66.229	Fundulus_heteroclitus
ENSLACG00000006490	BLM	87	64.096	ENSGMOG00000016431	blm	90	62.547	Gadus_morhua
ENSLACG00000006490	BLM	83	56.085	ENSGALG00000008256	BLM	61	70.996	Gallus_gallus
ENSLACG00000006490	BLM	54	68.734	ENSGAFG00000001117	blm	60	69.114	Gambusia_affinis
ENSLACG00000006490	BLM	90	62.712	ENSGACG00000010863	blm	100	74.248	Gasterosteus_aculeatus
ENSLACG00000006490	BLM	88	52.675	ENSGAGG00000005383	BLM	79	78.120	Gopherus_agassizii
ENSLACG00000006490	BLM	99	51.501	ENSGGOG00000007710	BLM	91	75.339	Gorilla_gorilla
ENSLACG00000006490	BLM	58	66.114	ENSHBUG00000015943	blm	60	66.232	Haplochromis_burtoni
ENSLACG00000006490	BLM	99	51.287	ENSHGLG00000013231	BLM	99	50.677	Heterocephalus_glaber_female
ENSLACG00000006490	BLM	73	56.420	ENSHCOG00000011455	blm	84	64.211	Hippocampus_comes
ENSLACG00000006490	BLM	63	63.348	ENSIPUG00000000529	blm	71	67.893	Ictalurus_punctatus
ENSLACG00000006490	BLM	58	66.941	ENSSTOG00000005000	BLM	59	66.783	Ictidomys_tridecemlineatus
ENSLACG00000006490	BLM	52	76.053	ENSJJAG00000016322	Blm	76	76.053	Jaculus_jaculus
ENSLACG00000006490	BLM	99	49.320	ENSLOCG00000014302	blm	99	49.101	Lepisosteus_oculatus
ENSLACG00000006490	BLM	99	51.875	ENSMFAG00000042982	BLM	91	75.610	Macaca_fascicularis
ENSLACG00000006490	BLM	99	51.943	ENSMMUG00000019526	BLM	91	75.610	Macaca_mulatta
ENSLACG00000006490	BLM	98	50.768	ENSMNEG00000031251	BLM	91	75.339	Macaca_nemestrina
ENSLACG00000006490	BLM	99	49.385	ENSMLEG00000032934	BLM	99	48.772	Mandrillus_leucophaeus
ENSLACG00000006490	BLM	59	65.614	ENSMAMG00000008726	blm	61	65.614	Mastacembelus_armatus
ENSLACG00000006490	BLM	87	65.877	ENSMZEG00005022323	blm	70	65.877	Maylandia_zebra
ENSLACG00000006490	BLM	58	67.689	ENSMAUG00000008953	Blm	99	50.136	Mesocricetus_auratus
ENSLACG00000006490	BLM	99	50.638	ENSMICG00000034442	BLM	55	75.407	Microcebus_murinus
ENSLACG00000006490	BLM	99	50.705	ENSMOCG00000016367	Blm	99	50.235	Microtus_ochrogaster
ENSLACG00000006490	BLM	60	64.220	ENSMMOG00000006959	blm	61	64.726	Mola_mola
ENSLACG00000006490	BLM	100	51.571	ENSMODG00000019449	BLM	87	68.019	Monodelphis_domestica
ENSLACG00000006490	BLM	62	65.814	ENSMALG00000007323	blm	64	65.814	Monopterus_albus
ENSLACG00000006490	BLM	58	67.407	MGP_CAROLIEiJ_G0029907	Blm	59	67.991	Mus_caroli
ENSLACG00000006490	BLM	58	67.096	ENSMUSG00000030528	Blm	59	67.564	Mus_musculus
ENSLACG00000006490	BLM	99	51.313	MGP_PahariEiJ_G0013129	Blm	99	51.116	Mus_pahari
ENSLACG00000006490	BLM	88	67.292	MGP_SPRETEiJ_G0031009	Blm	88	67.409	Mus_spretus
ENSLACG00000006490	BLM	84	51.675	ENSMPUG00000015657	BLM	50	74.554	Mustela_putorius_furo
ENSLACG00000006490	BLM	58	66.745	ENSMLUG00000014697	BLM	60	66.745	Myotis_lucifugus
ENSLACG00000006490	BLM	99	49.502	ENSNGAG00000001275	Blm	59	66.509	Nannospalax_galili
ENSLACG00000006490	BLM	88	65.574	ENSNBRG00000019702	blm	67	65.578	Neolamprologus_brichardi
ENSLACG00000006490	BLM	99	50.571	ENSNLEG00000012087	BLM	99	56.059	Nomascus_leucogenys
ENSLACG00000006490	BLM	100	49.085	ENSMEUG00000007253	BLM	59	61.916	Notamacropus_eugenii
ENSLACG00000006490	BLM	79	69.315	ENSOPRG00000011667	BLM	63	69.315	Ochotona_princeps
ENSLACG00000006490	BLM	73	56.157	ENSODEG00000015373	BLM	80	62.924	Octodon_degus
ENSLACG00000006490	BLM	53	70.347	ENSOANG00000009316	-	100	70.347	Ornithorhynchus_anatinus
ENSLACG00000006490	BLM	74	58.234	ENSORLG00000008110	blm	60	67.024	Oryzias_latipes
ENSLACG00000006490	BLM	78	55.997	ENSORLG00020004812	blm	60	67.143	Oryzias_latipes_hni
ENSLACG00000006490	BLM	100	48.663	ENSORLG00015018640	blm	80	68.579	Oryzias_latipes_hsok
ENSLACG00000006490	BLM	78	53.820	ENSOMEG00000023545	blm	60	65.371	Oryzias_melastigma
ENSLACG00000006490	BLM	99	50.937	ENSOARG00000012875	BLM	59	66.589	Ovis_aries
ENSLACG00000006490	BLM	99	50.962	ENSPPAG00000032173	BLM	99	51.044	Pan_paniscus
ENSLACG00000006490	BLM	58	67.138	ENSPPRG00000002471	BLM	55	74.638	Panthera_pardus
ENSLACG00000006490	BLM	58	66.549	ENSPTIG00000016168	BLM	55	74.414	Panthera_tigris_altaica
ENSLACG00000006490	BLM	75	57.600	ENSPTRG00000007460	BLM	99	50.812	Pan_troglodytes
ENSLACG00000006490	BLM	99	51.943	ENSPANG00000018572	BLM	91	75.610	Papio_anubis
ENSLACG00000006490	BLM	96	66.121	ENSPKIG00000008954	blm	73	66.276	Paramormyrops_kingsleyae
ENSLACG00000006490	BLM	50	69.643	ENSPMGG00000006629	blm	79	69.643	Periophthalmus_magnuspinnatus
ENSLACG00000006490	BLM	99	51.012	ENSPEMG00000017348	Blm	99	51.012	Peromyscus_maniculatus_bairdii
ENSLACG00000006490	BLM	100	50.975	ENSPCIG00000006609	BLM	86	66.976	Phascolarctos_cinereus
ENSLACG00000006490	BLM	60	64.032	ENSPFOG00000005059	blm	57	68.987	Poecilia_formosa
ENSLACG00000006490	BLM	54	68.608	ENSPLAG00000017344	blm	57	68.987	Poecilia_latipinna
ENSLACG00000006490	BLM	54	68.734	ENSPMEG00000000321	blm	57	69.114	Poecilia_mexicana
ENSLACG00000006490	BLM	57	68.354	ENSPREG00000007715	blm	60	68.734	Poecilia_reticulata
ENSLACG00000006490	BLM	88	66.863	ENSPPYG00000006784	BLM	88	66.862	Pongo_abelii
ENSLACG00000006490	BLM	66	66.197	ENSPCAG00000008960	BLM	67	66.197	Procavia_capensis
ENSLACG00000006490	BLM	99	45.783	ENSPCOG00000000439	BLM	57	58.491	Propithecus_coquereli
ENSLACG00000006490	BLM	71	84.488	ENSPVAG00000011642	BLM	72	84.488	Pteropus_vampyrus
ENSLACG00000006490	BLM	58	55.359	ENSPNYG00000010956	blm	57	55.359	Pundamilia_nyererei
ENSLACG00000006490	BLM	99	51.009	ENSRBIG00000029656	BLM	91	74.797	Rhinopithecus_bieti
ENSLACG00000006490	BLM	99	51.648	ENSRROG00000037871	BLM	91	74.797	Rhinopithecus_roxellana
ENSLACG00000006490	BLM	50	75.407	ENSSBOG00000030957	BLM	55	75.407	Saimiri_boliviensis_boliviensis
ENSLACG00000006490	BLM	88	67.795	ENSSHAG00000007988	BLM	86	67.911	Sarcophilus_harrisii
ENSLACG00000006490	BLM	59	64.781	ENSSFOG00015015462	blm	68	64.781	Scleropages_formosus
ENSLACG00000006490	BLM	79	53.288	ENSSMAG00000001120	blm	61	65.157	Scophthalmus_maximus
ENSLACG00000006490	BLM	64	62.280	ENSSARG00000006398	BLM	69	62.280	Sorex_araneus
ENSLACG00000006490	BLM	80	54.614	ENSSPUG00000000013	BLM	85	65.888	Sphenodon_punctatus
ENSLACG00000006490	BLM	59	64.877	ENSSPAG00000013999	blm	59	65.152	Stegastes_partitus
ENSLACG00000006490	BLM	80	69.865	ENSSSCG00000001816	BLM	83	69.865	Sus_scrofa
ENSLACG00000006490	BLM	79	49.450	ENSTGUG00000009959	-	74	58.837	Taeniopygia_guttata
ENSLACG00000006490	BLM	60	62.357	ENSTRUG00000019860	blm	61	63.542	Takifugu_rubripes
ENSLACG00000006490	BLM	99	47.483	ENSTNIG00000019246	blm	68	65.000	Tetraodon_nigroviridis
ENSLACG00000006490	BLM	65	61.993	ENSTBEG00000006706	BLM	56	76.225	Tupaia_belangeri
ENSLACG00000006490	BLM	79	55.451	ENSUMAG00000009105	BLM	95	72.992	Ursus_maritimus
ENSLACG00000006490	BLM	79	55.826	ENSVPAG00000000085	BLM	59	64.554	Vicugna_pacos
ENSLACG00000006490	BLM	94	69.565	ENSVVUG00000006402	BLM	83	69.919	Vulpes_vulpes
ENSLACG00000006490	BLM	100	51.651	ENSXETG00000007847	blm	94	30.827	Xenopus_tropicalis
ENSLACG00000006490	BLM	54	65.526	ENSXCOG00000020227	blm	55	65.696	Xiphophorus_couchianus
ENSLACG00000006490	BLM	54	68.188	ENSXMAG00000002951	blm	57	68.608	Xiphophorus_maculatus