EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000006680 (Gene tree)
Gene ID: 102366191
Gene Symbol: EXD1
Alias: EXDL1|MGC33637
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 72408 bases
Position: chrJH127273.1:230379-302786
Accession: 102366191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007536	DNA_pol_A_exo1	PF01612.20	1.9e-10	1	1
ENSLACP00000007535	DNA_pol_A_exo1	PF01612.20	2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007599	EXD1-201	1794	-	ENSLACP00000007535	597 (aa)	-	H3AD14
ENSLACT00000007600	EXD1-202	1779	XM_006001557	ENSLACP00000007536	592 (aa)	XP_006001619	H3AD15

Gene Model

Click here to download ENSLACG00000006680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006680	EXD1	69	50.360	ENSG00000178997	EXD1	89	38.776	Homo_sapiens
ENSLACG00000006680	EXD1	51	48.860	ENSAPOG00000004287	-	74	56.164	Acanthochromis_polyacanthus
ENSLACG00000006680	EXD1	67	51.970	ENSAMEG00000016793	EXD1	71	51.970	Ailuropoda_melanoleuca
ENSLACG00000006680	EXD1	69	44.819	ENSAOCG00000009355	-	74	44.819	Amphiprion_ocellaris
ENSLACG00000006680	EXD1	54	50.000	ENSAPEG00000002194	-	82	50.000	Amphiprion_percula
ENSLACG00000006680	EXD1	51	44.099	ENSATEG00000002623	-	73	44.099	Anabas_testudineus
ENSLACG00000006680	EXD1	66	47.236	ENSACAG00000003676	EXD1	99	47.236	Anolis_carolinensis
ENSLACG00000006680	EXD1	69	51.084	ENSANAG00000029058	EXD1	72	51.084	Aotus_nancymaae
ENSLACG00000006680	EXD1	72	42.623	ENSACLG00000001361	-	77	43.124	Astatotilapia_calliptera
ENSLACG00000006680	EXD1	73	43.607	ENSAMXG00000026016	-	79	43.607	Astyanax_mexicanus
ENSLACG00000006680	EXD1	52	55.049	ENSBTAG00000008363	EXD1	67	53.918	Bos_taurus
ENSLACG00000006680	EXD1	69	47.229	ENSCJAG00000020765	EXD1	71	47.229	Callithrix_jacchus
ENSLACG00000006680	EXD1	66	54.569	ENSCAFG00000009510	EXD1	68	54.569	Canis_familiaris
ENSLACG00000006680	EXD1	70	49.761	ENSCHIG00000019606	EXD1	74	49.761	Capra_hircus
ENSLACG00000006680	EXD1	66	49.227	ENSCPOG00000010573	EXD1	67	49.227	Cavia_porcellus
ENSLACG00000006680	EXD1	69	48.675	ENSCCAG00000016905	EXD1	72	48.675	Cebus_capucinus
ENSLACG00000006680	EXD1	69	50.363	ENSCATG00000037400	EXD1	72	50.363	Cercocebus_atys
ENSLACG00000006680	EXD1	58	37.921	ENSCSAG00000007647	EXD1	69	38.483	Chlorocebus_sabaeus
ENSLACG00000006680	EXD1	58	49.714	ENSCHOG00000011441	EXD1	69	49.714	Choloepus_hoffmanni
ENSLACG00000006680	EXD1	99	42.379	ENSCPBG00000013511	EXD1	92	42.379	Chrysemys_picta_bellii
ENSLACG00000006680	EXD1	69	46.523	ENSCANG00000036848	EXD1	71	46.523	Colobus_angolensis_palliatus
ENSLACG00000006680	EXD1	65	53.690	ENSCGRG00001011355	Exd1	74	50.114	Cricetulus_griseus_chok1gshd
ENSLACG00000006680	EXD1	65	53.690	ENSCGRG00000011633	Exd1	76	50.114	Cricetulus_griseus_crigri
ENSLACG00000006680	EXD1	66	42.821	ENSCSEG00000000904	-	69	42.821	Cynoglossus_semilaevis
ENSLACG00000006680	EXD1	61	38.147	ENSDARG00000098669	exd1	87	43.590	Danio_rerio
ENSLACG00000006680	EXD1	69	52.657	ENSDNOG00000011410	EXD1	72	52.657	Dasypus_novemcinctus
ENSLACG00000006680	EXD1	70	50.957	ENSEASG00005016394	EXD1	72	50.957	Equus_asinus_asinus
ENSLACG00000006680	EXD1	70	52.153	ENSECAG00000021250	EXD1	73	52.153	Equus_caballus
ENSLACG00000006680	EXD1	56	46.884	ENSEEUG00000001232	EXD1	67	46.884	Erinaceus_europaeus
ENSLACG00000006680	EXD1	64	46.842	ENSELUG00000006324	-	63	46.842	Esox_lucius
ENSLACG00000006680	EXD1	76	49.781	ENSFCAG00000028533	EXD1	78	49.781	Felis_catus
ENSLACG00000006680	EXD1	55	46.177	ENSGMOG00000015956	-	96	46.988	Gadus_morhua
ENSLACG00000006680	EXD1	64	46.354	ENSGALG00000041449	EXD1	95	45.780	Gallus_gallus
ENSLACG00000006680	EXD1	65	43.864	ENSGAFG00000017161	-	70	43.864	Gambusia_affinis
ENSLACG00000006680	EXD1	99	41.845	ENSGAGG00000019200	EXD1	92	40.661	Gopherus_agassizii
ENSLACG00000006680	EXD1	69	50.360	ENSGGOG00000004594	EXD1	72	50.360	Gorilla_gorilla
ENSLACG00000006680	EXD1	69	50.361	ENSHGLG00000015369	EXD1	72	50.361	Heterocephalus_glaber_female
ENSLACG00000006680	EXD1	66	52.284	ENSHGLG00100007398	EXD1	70	52.284	Heterocephalus_glaber_male
ENSLACG00000006680	EXD1	70	51.914	ENSSTOG00000014980	EXD1	73	51.914	Ictidomys_tridecemlineatus
ENSLACG00000006680	EXD1	81	41.176	ENSLBEG00000000022	-	84	41.548	Labrus_bergylta
ENSLACG00000006680	EXD1	66	43.719	ENSLOCG00000012278	-	96	43.719	Lepisosteus_oculatus
ENSLACG00000006680	EXD1	60	56.233	ENSLAFG00000014739	EXD1	69	56.233	Loxodonta_africana
ENSLACG00000006680	EXD1	69	50.363	ENSMFAG00000034670	EXD1	72	50.363	Macaca_fascicularis
ENSLACG00000006680	EXD1	69	50.363	ENSMMUG00000013991	EXD1	72	50.363	Macaca_mulatta
ENSLACG00000006680	EXD1	69	50.363	ENSMNEG00000037333	EXD1	72	50.363	Macaca_nemestrina
ENSLACG00000006680	EXD1	59	50.142	ENSMLEG00000033153	EXD1	97	56.294	Mandrillus_leucophaeus
ENSLACG00000006680	EXD1	72	43.326	ENSMZEG00005009193	-	80	43.823	Maylandia_zebra
ENSLACG00000006680	EXD1	65	45.088	ENSMGAG00000011179	EXD1	98	45.088	Meleagris_gallopavo
ENSLACG00000006680	EXD1	65	53.181	ENSMAUG00000002698	Exd1	69	53.181	Mesocricetus_auratus
ENSLACG00000006680	EXD1	70	52.143	ENSMICG00000014337	EXD1	73	52.143	Microcebus_murinus
ENSLACG00000006680	EXD1	72	50.577	ENSMOCG00000018151	Exd1	76	50.577	Microtus_ochrogaster
ENSLACG00000006680	EXD1	66	57.107	ENSMODG00000000164	EXD1	75	57.107	Monodelphis_domestica
ENSLACG00000006680	EXD1	64	44.591	ENSMALG00000015814	-	83	44.591	Monopterus_albus
ENSLACG00000006680	EXD1	72	50.346	MGP_CAROLIEiJ_G0024145	Exd1	75	50.346	Mus_caroli
ENSLACG00000006680	EXD1	72	49.423	ENSMUSG00000048647	Exd1	75	49.423	Mus_musculus
ENSLACG00000006680	EXD1	72	44.009	MGP_PahariEiJ_G0025588	Exd1	75	44.009	Mus_pahari
ENSLACG00000006680	EXD1	77	46.921	MGP_SPRETEiJ_G0025061	Exd1	82	46.921	Mus_spretus
ENSLACG00000006680	EXD1	66	54.198	ENSMPUG00000008811	EXD1	68	54.198	Mustela_putorius_furo
ENSLACG00000006680	EXD1	60	56.111	ENSMLUG00000001466	EXD1	68	56.111	Myotis_lucifugus
ENSLACG00000006680	EXD1	73	49.661	ENSNGAG00000002319	Exd1	77	49.887	Nannospalax_galili
ENSLACG00000006680	EXD1	69	48.333	ENSNLEG00000003456	EXD1	72	48.333	Nomascus_leucogenys
ENSLACG00000006680	EXD1	64	46.966	ENSONIG00000012043	-	96	47.493	Oreochromis_niloticus
ENSLACG00000006680	EXD1	60	54.469	ENSOCUG00000013817	EXD1	71	54.469	Oryctolagus_cuniculus
ENSLACG00000006680	EXD1	64	44.474	ENSORLG00000026344	-	72	44.474	Oryzias_latipes
ENSLACG00000006680	EXD1	63	44.562	ENSORLG00020005465	-	72	44.562	Oryzias_latipes_hni
ENSLACG00000006680	EXD1	63	44.562	ENSORLG00015004848	-	67	50.181	Oryzias_latipes_hsok
ENSLACG00000006680	EXD1	64	43.490	ENSOMEG00000019812	-	74	43.990	Oryzias_melastigma
ENSLACG00000006680	EXD1	66	45.477	ENSOGAG00000013095	EXD1	76	46.250	Otolemur_garnettii
ENSLACG00000006680	EXD1	70	51.196	ENSOARG00000020330	EXD1	73	51.196	Ovis_aries
ENSLACG00000006680	EXD1	69	50.600	ENSPPAG00000033760	EXD1	72	50.600	Pan_paniscus
ENSLACG00000006680	EXD1	76	50.000	ENSPPRG00000011128	EXD1	78	50.000	Panthera_pardus
ENSLACG00000006680	EXD1	76	50.219	ENSPTIG00000020026	EXD1	78	50.219	Panthera_tigris_altaica
ENSLACG00000006680	EXD1	69	50.600	ENSPTRG00000006941	EXD1	72	50.600	Pan_troglodytes
ENSLACG00000006680	EXD1	69	50.363	ENSPANG00000019000	EXD1	72	50.363	Papio_anubis
ENSLACG00000006680	EXD1	70	42.619	ENSPKIG00000000671	-	74	43.128	Paramormyrops_kingsleyae
ENSLACG00000006680	EXD1	68	50.000	ENSPSIG00000014473	EXD1	67	50.000	Pelodiscus_sinensis
ENSLACG00000006680	EXD1	67	41.013	ENSPMGG00000015466	-	78	41.013	Periophthalmus_magnuspinnatus
ENSLACG00000006680	EXD1	65	57.252	ENSPCIG00000027845	EXD1	78	57.252	Phascolarctos_cinereus
ENSLACG00000006680	EXD1	65	42.526	ENSPFOG00000013673	-	95	41.985	Poecilia_formosa
ENSLACG00000006680	EXD1	70	42.105	ENSPLAG00000014262	-	74	42.476	Poecilia_latipinna
ENSLACG00000006680	EXD1	70	42.105	ENSPMEG00000012071	-	74	42.961	Poecilia_mexicana
ENSLACG00000006680	EXD1	65	43.603	ENSPREG00000019468	-	70	44.386	Poecilia_reticulata
ENSLACG00000006680	EXD1	58	51.429	ENSPPYG00000006369	EXD1	67	51.429	Pongo_abelii
ENSLACG00000006680	EXD1	76	45.952	ENSPCOG00000026598	EXD1	76	52.000	Propithecus_coquereli
ENSLACG00000006680	EXD1	58	54.131	ENSPVAG00000003149	EXD1	69	54.131	Pteropus_vampyrus
ENSLACG00000006680	EXD1	65	47.570	ENSPNAG00000008931	exd1	75	47.570	Pygocentrus_nattereri
ENSLACG00000006680	EXD1	66	52.792	ENSRNOG00000025360	Exd1	69	52.792	Rattus_norvegicus
ENSLACG00000006680	EXD1	59	53.501	ENSRBIG00000037257	EXD1	100	53.501	Rhinopithecus_bieti
ENSLACG00000006680	EXD1	69	50.600	ENSRROG00000034491	EXD1	72	50.600	Rhinopithecus_roxellana
ENSLACG00000006680	EXD1	66	45.939	ENSSBOG00000024842	EXD1	66	45.939	Saimiri_boliviensis_boliviensis
ENSLACG00000006680	EXD1	65	56.743	ENSSHAG00000016701	EXD1	73	56.743	Sarcophilus_harrisii
ENSLACG00000006680	EXD1	71	45.283	ENSSDUG00000004368	exd1	72	45.519	Seriola_dumerili
ENSLACG00000006680	EXD1	55	53.593	ENSSARG00000009556	-	68	53.409	Sorex_araneus
ENSLACG00000006680	EXD1	73	44.138	ENSSPUG00000001716	EXD1	69	44.138	Sphenodon_punctatus
ENSLACG00000006680	EXD1	67	53.713	ENSSSCG00000004752	EXD1	71	53.713	Sus_scrofa
ENSLACG00000006680	EXD1	67	40.955	ENSTNIG00000017431	-	96	40.955	Tetraodon_nigroviridis
ENSLACG00000006680	EXD1	58	51.453	ENSTTRG00000009809	EXD1	68	51.282	Tursiops_truncatus
ENSLACG00000006680	EXD1	67	52.970	ENSUMAG00000012170	EXD1	70	52.970	Ursus_maritimus
ENSLACG00000006680	EXD1	66	48.615	ENSVPAG00000007758	EXD1	75	48.615	Vicugna_pacos
ENSLACG00000006680	EXD1	66	54.315	ENSVVUG00000026704	EXD1	68	54.315	Vulpes_vulpes
ENSLACG00000006680	EXD1	67	42.857	ENSXETG00000017895	exd1	96	43.766	Xenopus_tropicalis
ENSLACG00000006680	EXD1	56	45.000	ENSXCOG00000010879	-	86	45.000	Xiphophorus_couchianus
ENSLACG00000006680	EXD1	60	42.938	ENSXMAG00000014462	-	85	45.758	Xiphophorus_maculatus