EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000006699 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2225 bases
Position: chrJH127884.1:231464-233688
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007560	RVT_1	PF00078.27	7.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007624	-	1413	-	ENSLACP00000007560	471 (aa)	-	H3AD39

Gene Model

Click here to download ENSLACG00000006699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000006699	-	59	31.193	ENSLACG00000014709	-	81	31.193
ENSLACG00000006699	-	60	68.944	ENSLACG00000010360	-	99	68.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006699	-	54	32.677	ENSAPOG00000010356	-	66	32.677	Acanthochromis_polyacanthus
ENSLACG00000006699	-	67	31.755	ENSAPEG00000009254	-	60	31.755	Amphiprion_percula
ENSLACG00000006699	-	61	31.325	ENSAPEG00000001652	-	90	31.325	Amphiprion_percula
ENSLACG00000006699	-	65	34.615	ENSACLG00000021049	-	90	34.615	Astatotilapia_calliptera
ENSLACG00000006699	-	87	33.060	ENSACLG00000017252	-	69	32.182	Astatotilapia_calliptera
ENSLACG00000006699	-	86	32.505	ENSACLG00000000577	-	91	32.505	Astatotilapia_calliptera
ENSLACG00000006699	-	53	39.200	ENSACLG00000009990	-	66	39.200	Astatotilapia_calliptera
ENSLACG00000006699	-	87	32.444	ENSACLG00000013208	-	71	31.636	Astatotilapia_calliptera
ENSLACG00000006699	-	65	30.117	ENSCSEG00000009301	-	86	30.117	Cynoglossus_semilaevis
ENSLACG00000006699	-	86	34.362	ENSELUG00000023077	-	94	33.394	Esox_lucius
ENSLACG00000006699	-	50	36.820	ENSHBUG00000016469	-	67	36.820	Haplochromis_burtoni
ENSLACG00000006699	-	70	33.245	ENSIPUG00000022680	-	85	33.245	Ictalurus_punctatus
ENSLACG00000006699	-	55	31.908	ENSIPUG00000006522	-	98	31.908	Ictalurus_punctatus
ENSLACG00000006699	-	69	33.867	ENSMZEG00005004417	-	100	33.867	Maylandia_zebra
ENSLACG00000006699	-	53	39.130	ENSMZEG00005027054	-	85	39.130	Maylandia_zebra
ENSLACG00000006699	-	62	34.412	ENSMZEG00005001407	-	95	34.412	Maylandia_zebra
ENSLACG00000006699	-	52	40.157	ENSMODG00000028208	-	61	40.157	Monodelphis_domestica
ENSLACG00000006699	-	71	33.245	ENSMALG00000007492	-	92	33.245	Monopterus_albus
ENSLACG00000006699	-	87	31.828	ENSORLG00000028845	-	93	31.512	Oryzias_latipes
ENSLACG00000006699	-	88	31.405	ENSORLG00000028330	-	69	30.331	Oryzias_latipes
ENSLACG00000006699	-	87	31.211	ENSORLG00000023376	-	62	30.965	Oryzias_latipes
ENSLACG00000006699	-	68	32.782	ENSORLG00000015190	-	75	32.782	Oryzias_latipes
ENSLACG00000006699	-	88	30.992	ENSORLG00000024563	-	59	30.528	Oryzias_latipes
ENSLACG00000006699	-	88	30.785	ENSORLG00000028876	-	63	30.333	Oryzias_latipes
ENSLACG00000006699	-	88	30.579	ENSORLG00000023326	-	68	30.137	Oryzias_latipes
ENSLACG00000006699	-	62	32.738	ENSORLG00000029682	-	96	32.738	Oryzias_latipes
ENSLACG00000006699	-	67	32.778	ENSORLG00020012943	-	99	32.778	Oryzias_latipes_hni
ENSLACG00000006699	-	87	31.417	ENSORLG00020007707	-	51	31.148	Oryzias_latipes_hni
ENSLACG00000006699	-	88	31.198	ENSORLG00020005006	-	67	30.000	Oryzias_latipes_hni
ENSLACG00000006699	-	52	35.039	ENSORLG00015011564	-	50	35.039	Oryzias_latipes_hsok
ENSLACG00000006699	-	88	30.515	ENSORLG00015008272	-	59	30.137	Oryzias_latipes_hsok
ENSLACG00000006699	-	88	30.372	ENSORLG00015006293	-	67	30.372	Oryzias_latipes_hsok
ENSLACG00000006699	-	53	35.600	ENSORLG00015001080	-	60	35.600	Oryzias_latipes_hsok
ENSLACG00000006699	-	83	31.336	ENSORLG00015014615	-	84	31.336	Oryzias_latipes_hsok
ENSLACG00000006699	-	72	31.186	ENSPKIG00000009130	-	51	31.186	Paramormyrops_kingsleyae
ENSLACG00000006699	-	77	31.504	ENSPKIG00000021701	-	86	31.504	Paramormyrops_kingsleyae
ENSLACG00000006699	-	86	31.884	ENSPREG00000017352	-	51	30.826	Poecilia_reticulata
ENSLACG00000006699	-	56	33.876	ENSPNYG00000007962	-	91	33.876	Pundamilia_nyererei
ENSLACG00000006699	-	65	30.117	ENSPNAG00000018609	-	86	30.117	Pygocentrus_nattereri
ENSLACG00000006699	-	52	31.690	ENSPNAG00000009857	-	82	31.690	Pygocentrus_nattereri
ENSLACG00000006699	-	52	30.662	ENSPNAG00000021600	-	93	30.662	Pygocentrus_nattereri
ENSLACG00000006699	-	62	32.012	ENSPNAG00000002794	-	81	32.012	Pygocentrus_nattereri
ENSLACG00000006699	-	61	30.149	ENSSFOG00015012021	-	92	30.149	Scleropages_formosus
ENSLACG00000006699	-	67	33.148	ENSSMAG00000002801	-	74	33.148	Scophthalmus_maximus
ENSLACG00000006699	-	52	36.842	ENSXMAG00000028373	-	76	36.842	Xiphophorus_maculatus
ENSLACG00000006699	-	51	33.099	ENSXMAG00000021563	-	90	33.099	Xiphophorus_maculatus