EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000006743 (Gene tree)
Gene ID: 102367153
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 44985 bases
Position: chrJH127522.1:233952-278936
Accession: 102367153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007610	RRM_5	PF13893.6	3.5e-09	1	2
ENSLACP00000007610	RRM_5	PF13893.6	3.5e-09	2	2
ENSLACP00000007609	RRM_5	PF13893.6	9.6e-09	1	2
ENSLACP00000007609	RRM_5	PF13893.6	9.6e-09	2	2
ENSLACP00000021859	RRM_5	PF13893.6	9.6e-09	1	2
ENSLACP00000021859	RRM_5	PF13893.6	9.6e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007674	-	2742	-	ENSLACP00000007610	914 (aa)	-	H3AD89
ENSLACT00000007673	-	3946	XM_006003692	ENSLACP00000007609	918 (aa)	XP_006003754	H3AD88
ENSLACT00000025384	-	3034	-	ENSLACP00000021859	918 (aa)	-	H3AD88

Gene Model

Click here to download ENSLACG00000006743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006743	-	99	57.329	ENSG00000015479	MATR3	100	71.311	Homo_sapiens
ENSLACG00000006743	-	59	59.091	ENSG00000075292	ZNF638	57	31.609	Homo_sapiens
ENSLACG00000006743	-	99	58.307	ENSAMEG00000011347	-	100	57.816	Ailuropoda_melanoleuca
ENSLACG00000006743	-	99	59.013	ENSAPLG00000008118	-	99	57.725	Anas_platyrhynchos
ENSLACG00000006743	-	100	56.649	ENSACAG00000016233	-	99	55.459	Anolis_carolinensis
ENSLACG00000006743	-	99	58.092	ENSANAG00000022951	-	98	57.205	Aotus_nancymaae
ENSLACG00000006743	-	68	49.131	ENSANAG00000024654	-	90	50.356	Aotus_nancymaae
ENSLACG00000006743	-	86	44.792	ENSAMXG00000010685	matr3l1.1	79	45.283	Astyanax_mexicanus
ENSLACG00000006743	-	82	48.276	ENSAMXG00000010681	matr3l1.1	82	48.276	Astyanax_mexicanus
ENSLACG00000006743	-	94	57.925	ENSBTAG00000006756	MATR3	99	57.013	Bos_taurus
ENSLACG00000006743	-	99	58.691	ENSCJAG00000006888	-	99	57.296	Callithrix_jacchus
ENSLACG00000006743	-	99	58.134	ENSCAFG00000001345	MATR3	99	57.313	Canis_familiaris
ENSLACG00000006743	-	99	57.833	ENSCAFG00020010504	-	98	60.296	Canis_lupus_dingo
ENSLACG00000006743	-	99	57.405	ENSCHIG00000025746	-	99	56.508	Capra_hircus
ENSLACG00000006743	-	99	57.050	ENSTSYG00000011028	-	99	56.541	Carlito_syrichta
ENSLACG00000006743	-	99	56.786	ENSCPOG00000014076	-	99	55.592	Cavia_porcellus
ENSLACG00000006743	-	99	57.112	ENSCCAG00000025074	-	99	56.164	Cebus_capucinus
ENSLACG00000006743	-	51	59.091	ENSCCAG00000028170	ZNF638	74	31.609	Cebus_capucinus
ENSLACG00000006743	-	57	59.091	ENSCATG00000032207	ZNF638	74	30.636	Cercocebus_atys
ENSLACG00000006743	-	67	53.074	ENSCATG00000041304	-	97	51.456	Cercocebus_atys
ENSLACG00000006743	-	99	56.786	ENSCLAG00000015998	-	99	55.700	Chinchilla_lanigera
ENSLACG00000006743	-	99	57.329	ENSCSAG00000013075	-	99	56.135	Chlorocebus_sabaeus
ENSLACG00000006743	-	99	58.661	ENSCPBG00000006303	-	99	58.422	Chrysemys_picta_bellii
ENSLACG00000006743	-	99	59.120	ENSCANG00000028224	-	99	57.725	Colobus_angolensis_palliatus
ENSLACG00000006743	-	99	57.158	ENSCGRG00001020227	Matr3	99	56.725	Cricetulus_griseus_chok1gshd
ENSLACG00000006743	-	99	57.158	ENSCGRG00000011298	Matr3	99	56.725	Cricetulus_griseus_crigri
ENSLACG00000006743	-	91	41.667	ENSCSEG00000012682	matr3l1.1	85	42.424	Cynoglossus_semilaevis
ENSLACG00000006743	-	79	52.308	ENSCVAG00000005337	matr3l1.1	82	53.968	Cyprinodon_variegatus
ENSLACG00000006743	-	99	58.521	ENSDNOG00000037723	-	99	57.495	Dasypus_novemcinctus
ENSLACG00000006743	-	99	57.484	ENSEASG00005020857	-	99	56.508	Equus_asinus_asinus
ENSLACG00000006743	-	99	57.484	ENSECAG00000012882	MATR3	99	56.508	Equus_caballus
ENSLACG00000006743	-	52	55.714	ENSELUG00000021651	si:ch211-271b14.1	90	55.714	Esox_lucius
ENSLACG00000006743	-	99	57.375	ENSFCAG00000021911	-	99	56.230	Felis_catus
ENSLACG00000006743	-	99	58.691	ENSFALG00000003071	-	99	57.725	Ficedula_albicollis
ENSLACG00000006743	-	99	57.003	ENSFDAG00000017675	-	99	55.266	Fukomys_damarensis
ENSLACG00000006743	-	99	58.874	ENSGALG00000002478	MATR3	99	57.783	Gallus_gallus
ENSLACG00000006743	-	99	58.767	ENSGAGG00000011386	-	99	58.529	Gopherus_agassizii
ENSLACG00000006743	-	99	59.013	ENSGGOG00000007308	-	99	57.618	Gorilla_gorilla
ENSLACG00000006743	-	60	59.091	ENSGGOG00000012511	ZNF638	74	32.184	Gorilla_gorilla
ENSLACG00000006743	-	99	57.546	ENSHGLG00000004673	MATR3	99	55.917	Heterocephalus_glaber_female
ENSLACG00000006743	-	63	53.659	ENSHGLG00100006442	-	99	51.910	Heterocephalus_glaber_male
ENSLACG00000006743	-	59	45.312	ENSHCOG00000013223	matr3l1.1	80	37.853	Hippocampus_comes
ENSLACG00000006743	-	71	62.500	ENSIPUG00000020686	MATR3	87	54.054	Ictalurus_punctatus
ENSLACG00000006743	-	99	54.664	ENSSTOG00000014746	-	99	55.917	Ictidomys_tridecemlineatus
ENSLACG00000006743	-	99	57.717	ENSJJAG00000021710	-	99	56.087	Jaculus_jaculus
ENSLACG00000006743	-	51	40.936	ENSLBEG00000018267	matr3l1.1	85	50.000	Labrus_bergylta
ENSLACG00000006743	-	99	59.013	ENSMFAG00000000634	-	99	57.618	Macaca_fascicularis
ENSLACG00000006743	-	57	59.091	ENSMFAG00000034359	ZNF638	74	31.579	Macaca_fascicularis
ENSLACG00000006743	-	56	64.062	ENSMMUG00000015963	-	98	62.695	Macaca_mulatta
ENSLACG00000006743	-	99	59.013	ENSMMUG00000016741	MATR3	99	57.618	Macaca_mulatta
ENSLACG00000006743	-	57	59.091	ENSMNEG00000028987	ZNF638	74	30.636	Macaca_nemestrina
ENSLACG00000006743	-	99	58.369	ENSMNEG00000042856	-	99	56.974	Macaca_nemestrina
ENSLACG00000006743	-	99	58.476	ENSMLEG00000041178	-	99	57.082	Mandrillus_leucophaeus
ENSLACG00000006743	-	67	56.364	ENSMAMG00000013840	matr3l1.1	61	52.381	Mastacembelus_armatus
ENSLACG00000006743	-	99	58.661	ENSMGAG00000001331	-	99	57.569	Meleagris_gallopavo
ENSLACG00000006743	-	76	63.675	ENSMAUG00000011647	Matr3	99	56.833	Mesocricetus_auratus
ENSLACG00000006743	-	66	53.670	ENSMICG00000012438	-	98	52.028	Microcebus_murinus
ENSLACG00000006743	-	99	57.500	ENSMOCG00000015711	Matr3	99	56.957	Microtus_ochrogaster
ENSLACG00000006743	-	99	57.780	ENSMODG00000011925	-	99	56.243	Monodelphis_domestica
ENSLACG00000006743	-	99	57.003	MGP_CAROLIEiJ_G0022108	Matr3	99	56.026	Mus_caroli
ENSLACG00000006743	-	99	57.003	ENSMUSG00000037236	Matr3	99	56.026	Mus_musculus
ENSLACG00000006743	-	99	57.003	MGP_PahariEiJ_G0018842	Matr3	99	55.917	Mus_pahari
ENSLACG00000006743	-	99	56.786	MGP_SPRETEiJ_G0023020	Matr3	99	55.809	Mus_spretus
ENSLACG00000006743	-	99	58.026	ENSMPUG00000009297	-	99	57.205	Mustela_putorius_furo
ENSLACG00000006743	-	99	56.616	ENSMLUG00000005798	-	99	56.460	Myotis_lucifugus
ENSLACG00000006743	-	99	57.546	ENSNGAG00000017452	Matr3	99	56.243	Nannospalax_galili
ENSLACG00000006743	-	99	57.329	ENSNLEG00000009093	-	99	56.393	Nomascus_leucogenys
ENSLACG00000006743	-	99	57.405	ENSOPRG00000016511	-	100	56.324	Ochotona_princeps
ENSLACG00000006743	-	85	66.667	ENSODEG00000003015	-	99	56.196	Octodon_degus
ENSLACG00000006743	-	99	57.220	ENSOCUG00000026311	MATR3	99	56.026	Oryctolagus_cuniculus
ENSLACG00000006743	-	68	54.386	ENSORLG00020009362	matr3l1.1	87	34.884	Oryzias_latipes_hni
ENSLACG00000006743	-	71	43.478	ENSORLG00015018551	matr3l1.1	83	39.423	Oryzias_latipes_hsok
ENSLACG00000006743	-	68	54.386	ENSOMEG00000022287	matr3l1.1	79	52.381	Oryzias_melastigma
ENSLACG00000006743	-	99	57.112	ENSOGAG00000010607	-	99	56.026	Otolemur_garnettii
ENSLACG00000006743	-	99	57.405	ENSOARG00000016931	-	99	56.508	Ovis_aries
ENSLACG00000006743	-	99	58.051	ENSPPAG00000001418	-	99	57.296	Pan_paniscus
ENSLACG00000006743	-	59	59.091	ENSPPAG00000039298	ZNF638	74	31.609	Pan_paniscus
ENSLACG00000006743	-	53	66.316	ENSPPAG00000026720	-	94	66.316	Pan_paniscus
ENSLACG00000006743	-	99	57.484	ENSPPRG00000008004	-	99	56.338	Panthera_pardus
ENSLACG00000006743	-	96	57.627	ENSPTIG00000010711	-	99	56.433	Panthera_tigris_altaica
ENSLACG00000006743	-	99	58.051	ENSPTRG00000017294	MATR3	99	57.296	Pan_troglodytes
ENSLACG00000006743	-	57	59.091	ENSPTRG00000012048	ZNF638	74	31.609	Pan_troglodytes
ENSLACG00000006743	-	99	59.013	ENSPANG00000012018	-	99	57.618	Papio_anubis
ENSLACG00000006743	-	67	53.485	ENSPANG00000032489	-	99	51.864	Papio_anubis
ENSLACG00000006743	-	88	56.338	ENSPKIG00000000333	matr3l1.1	85	54.795	Paramormyrops_kingsleyae
ENSLACG00000006743	-	99	58.705	ENSPSIG00000014598	-	99	58.360	Pelodiscus_sinensis
ENSLACG00000006743	-	99	57.451	ENSPEMG00000020679	Matr3	99	56.508	Peromyscus_maniculatus_bairdii
ENSLACG00000006743	-	99	59.013	ENSPPYG00000015835	-	99	57.618	Pongo_abelii
ENSLACG00000006743	-	99	57.872	ENSPCOG00000025718	-	99	56.135	Propithecus_coquereli
ENSLACG00000006743	-	98	58.888	ENSPVAG00000015431	-	100	57.579	Pteropus_vampyrus
ENSLACG00000006743	-	99	57.438	ENSRNOG00000019875	Matr3	99	55.809	Rattus_norvegicus
ENSLACG00000006743	-	67	53.496	ENSRBIG00000034713	-	97	51.870	Rhinopithecus_bieti
ENSLACG00000006743	-	51	59.091	ENSRBIG00000029826	ZNF638	74	30.058	Rhinopithecus_bieti
ENSLACG00000006743	-	99	58.155	ENSRROG00000039415	-	99	56.760	Rhinopithecus_roxellana
ENSLACG00000006743	-	99	55.917	ENSRROG00000043949	-	99	54.723	Rhinopithecus_roxellana
ENSLACG00000006743	-	51	59.091	ENSSBOG00000029960	ZNF638	74	31.609	Saimiri_boliviensis_boliviensis
ENSLACG00000006743	-	99	58.397	ENSSBOG00000030159	-	99	56.135	Saimiri_boliviensis_boliviensis
ENSLACG00000006743	-	99	58.026	ENSSHAG00000010331	-	99	56.243	Sarcophilus_harrisii
ENSLACG00000006743	-	68	56.364	ENSSDUG00000015369	matr3l1.1	74	54.545	Seriola_dumerili
ENSLACG00000006743	-	99	57.923	ENSSPUG00000019236	-	99	57.388	Sphenodon_punctatus
ENSLACG00000006743	-	99	58.134	ENSSSCG00000014343	-	99	57.484	Sus_scrofa
ENSLACG00000006743	-	99	58.817	ENSTGUG00000014568	MATR3	99	57.618	Taeniopygia_guttata
ENSLACG00000006743	-	69	59.184	ENSTNIG00000003166	matr3l1.1	89	59.184	Tetraodon_nigroviridis
ENSLACG00000006743	-	76	63.533	ENSUAMG00000000097	-	97	60.162	Ursus_americanus
ENSLACG00000006743	-	99	58.415	ENSUMAG00000015808	-	99	57.158	Ursus_maritimus
ENSLACG00000006743	-	99	58.432	ENSVPAG00000006337	-	99	57.680	Vicugna_pacos
ENSLACG00000006743	-	99	57.484	ENSVVUG00000020287	-	99	56.338	Vulpes_vulpes
ENSLACG00000006743	-	99	48.507	ENSXETG00000003838	matr3	99	48.239	Xenopus_tropicalis
ENSLACG00000006743	-	60	37.681	ENSXMAG00000014107	-	77	32.000	Xiphophorus_maculatus