EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000006748 (Gene tree)
Gene ID: -
Gene Symbol: zgc:194242
Alias: -
Full Name: zgc:194242
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2143 bases
Position: chrJH126576.1:234257-236399
Accession: ZDB-GENE-081022-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007615	Methyltransf_31	PF13847.6	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007679	-	680	-	ENSLACP00000007615	210 (aa)	-	H3AD94

Gene Model

Click here to download ENSLACG00000006748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006748	zgc:194242	100	49.289	ENSAPOG00000018594	zgc:194242	88	49.289	Acanthochromis_polyacanthus
ENSLACG00000006748	zgc:194242	100	51.185	ENSACIG00000014556	zgc:194242	100	51.185	Amphilophus_citrinellus
ENSLACG00000006748	zgc:194242	100	50.237	ENSAOCG00000023023	zgc:194242	100	50.237	Amphiprion_ocellaris
ENSLACG00000006748	zgc:194242	100	50.237	ENSAPEG00000005200	zgc:194242	100	50.237	Amphiprion_percula
ENSLACG00000006748	zgc:194242	100	53.555	ENSATEG00000023424	zgc:194242	100	53.555	Anabas_testudineus
ENSLACG00000006748	zgc:194242	100	53.555	ENSACLG00000008295	zgc:194242	88	53.555	Astatotilapia_calliptera
ENSLACG00000006748	zgc:194242	100	51.659	ENSAMXG00000029324	zgc:194242	100	51.659	Astyanax_mexicanus
ENSLACG00000006748	zgc:194242	99	52.153	ENSCVAG00000015131	zgc:194242	97	52.153	Cyprinodon_variegatus
ENSLACG00000006748	zgc:194242	100	54.028	ENSDARG00000079532	zgc:194242	100	54.028	Danio_rerio
ENSLACG00000006748	zgc:194242	94	45.226	ENSEBUG00000016980	zgc:194242	92	45.226	Eptatretus_burgeri
ENSLACG00000006748	zgc:194242	80	42.197	ENSEBUG00000005829	zgc:194242	88	42.197	Eptatretus_burgeri
ENSLACG00000006748	zgc:194242	99	51.675	ENSFHEG00000005954	zgc:194242	99	51.675	Fundulus_heteroclitus
ENSLACG00000006748	zgc:194242	100	49.289	ENSGAFG00000007320	zgc:194242	100	49.289	Gambusia_affinis
ENSLACG00000006748	zgc:194242	100	53.555	ENSHBUG00000006618	zgc:194242	100	53.555	Haplochromis_burtoni
ENSLACG00000006748	zgc:194242	100	54.028	ENSIPUG00000010973	zgc:194242	100	54.028	Ictalurus_punctatus
ENSLACG00000006748	zgc:194242	100	51.659	ENSKMAG00000020260	zgc:194242	100	51.659	Kryptolebias_marmoratus
ENSLACG00000006748	zgc:194242	100	50.711	ENSLBEG00000008626	zgc:194242	96	50.711	Labrus_bergylta
ENSLACG00000006748	zgc:194242	100	52.133	ENSMAMG00000008456	zgc:194242	100	52.133	Mastacembelus_armatus
ENSLACG00000006748	zgc:194242	100	50.237	ENSMAMG00000008445	zgc:194242	100	50.237	Mastacembelus_armatus
ENSLACG00000006748	zgc:194242	100	53.555	ENSMZEG00005027143	zgc:194242	88	53.555	Maylandia_zebra
ENSLACG00000006748	zgc:194242	99	53.110	ENSMMOG00000011400	zgc:194242	100	53.110	Mola_mola
ENSLACG00000006748	zgc:194242	60	52.381	ENSNBRG00000019381	zgc:194242	85	52.381	Neolamprologus_brichardi
ENSLACG00000006748	zgc:194242	100	54.976	ENSONIG00000012343	zgc:194242	88	54.976	Oreochromis_niloticus
ENSLACG00000006748	zgc:194242	100	48.095	ENSORLG00000008448	zgc:194242	100	48.095	Oryzias_latipes
ENSLACG00000006748	zgc:194242	99	52.381	ENSORLG00020004952	zgc:194242	84	52.381	Oryzias_latipes_hni
ENSLACG00000006748	zgc:194242	100	50.711	ENSORLG00015021414	zgc:194242	100	50.711	Oryzias_latipes_hsok
ENSLACG00000006748	zgc:194242	100	53.555	ENSOMEG00000014673	zgc:194242	100	53.555	Oryzias_melastigma
ENSLACG00000006748	zgc:194242	100	51.185	ENSPFOG00000004186	zgc:194242	100	51.185	Poecilia_formosa
ENSLACG00000006748	zgc:194242	100	50.711	ENSPLAG00000001800	zgc:194242	100	50.711	Poecilia_latipinna
ENSLACG00000006748	zgc:194242	100	50.711	ENSPMEG00000017062	zgc:194242	98	50.711	Poecilia_mexicana
ENSLACG00000006748	zgc:194242	100	51.185	ENSPREG00000019758	zgc:194242	52	51.185	Poecilia_reticulata
ENSLACG00000006748	zgc:194242	100	53.555	ENSPNYG00000016170	zgc:194242	100	53.555	Pundamilia_nyererei
ENSLACG00000006748	zgc:194242	97	51.471	ENSPNAG00000021317	zgc:194242	97	51.471	Pygocentrus_nattereri
ENSLACG00000006748	zgc:194242	98	48.058	ENSPNAG00000021337	zgc:194242	98	48.058	Pygocentrus_nattereri
ENSLACG00000006748	zgc:194242	100	55.924	ENSSFOG00015023045	zgc:194242	100	55.924	Scleropages_formosus
ENSLACG00000006748	zgc:194242	100	52.607	ENSSDUG00000014923	zgc:194242	100	52.607	Seriola_dumerili
ENSLACG00000006748	zgc:194242	79	52.695	ENSSLDG00000009451	-	99	52.695	Seriola_lalandi_dorsalis
ENSLACG00000006748	zgc:194242	100	52.607	ENSSLDG00000002221	zgc:194242	100	52.607	Seriola_lalandi_dorsalis
ENSLACG00000006748	zgc:194242	100	53.081	ENSSPAG00000023499	zgc:194242	100	53.081	Stegastes_partitus
ENSLACG00000006748	zgc:194242	60	50.794	ENSTNIG00000015027	zgc:194242	98	50.794	Tetraodon_nigroviridis
ENSLACG00000006748	zgc:194242	100	49.289	ENSXCOG00000007474	zgc:194242	100	49.289	Xiphophorus_couchianus
ENSLACG00000006748	zgc:194242	100	48.815	ENSXMAG00000008239	zgc:194242	100	48.815	Xiphophorus_maculatus