EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000006810 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 15214 bases
Position: chrJH126781.1:237945-253158
Accession: 102357780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007687	RNA_pol_L_2	PF13656.6	4.5e-28	1	1
ENSLACP00000007687	RNA_pol_L	PF01193.24	7.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007751	POLR1D-201	363	XM_005994727	ENSLACP00000007687	120 (aa)	XP_005994789	H3ADG6

Gene Model

Click here to download ENSLACG00000006810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006810	POLR1D	95	66.087	ENSG00000186184	POLR1D	88	71.569	Homo_sapiens
ENSLACG00000006810	POLR1D	83	67.000	ENSAPOG00000021882	polr1d	94	67.000	Acanthochromis_polyacanthus
ENSLACG00000006810	POLR1D	95	66.087	ENSAMEG00000019095	POLR1D	92	66.087	Ailuropoda_melanoleuca
ENSLACG00000006810	POLR1D	90	69.725	ENSACIG00000013328	polr1d	94	69.725	Amphilophus_citrinellus
ENSLACG00000006810	POLR1D	87	67.308	ENSAOCG00000018500	polr1d	91	67.308	Amphiprion_ocellaris
ENSLACG00000006810	POLR1D	87	66.346	ENSAPEG00000009489	polr1d	91	66.346	Amphiprion_percula
ENSLACG00000006810	POLR1D	90	70.370	ENSATEG00000019322	polr1d	94	70.370	Anabas_testudineus
ENSLACG00000006810	POLR1D	89	67.593	ENSACAG00000015753	POLR1D	93	67.593	Anolis_carolinensis
ENSLACG00000006810	POLR1D	95	66.087	ENSANAG00000024486	POLR1D	86	66.087	Aotus_nancymaae
ENSLACG00000006810	POLR1D	90	68.807	ENSACLG00000023805	polr1d	96	68.807	Astatotilapia_calliptera
ENSLACG00000006810	POLR1D	88	67.619	ENSAMXG00000036118	polr1d	91	67.619	Astyanax_mexicanus
ENSLACG00000006810	POLR1D	96	65.517	ENSBTAG00000008642	POLR1D	87	65.517	Bos_taurus
ENSLACG00000006810	POLR1D	96	65.517	ENSBTAG00000033252	-	87	65.517	Bos_taurus
ENSLACG00000006810	POLR1D	73	37.931	WBGene00010230	rpac-19	58	39.286	Caenorhabditis_elegans
ENSLACG00000006810	POLR1D	95	65.217	ENSCJAG00000044669	POLR1D	86	65.217	Callithrix_jacchus
ENSLACG00000006810	POLR1D	95	66.087	ENSCAFG00000006755	POLR1D	86	66.087	Canis_familiaris
ENSLACG00000006810	POLR1D	96	65.517	ENSCHIG00000021910	POLR1D	87	65.517	Capra_hircus
ENSLACG00000006810	POLR1D	85	62.500	ENSTSYG00000034852	-	86	62.500	Carlito_syrichta
ENSLACG00000006810	POLR1D	97	66.116	ENSTSYG00000026817	-	91	66.116	Carlito_syrichta
ENSLACG00000006810	POLR1D	55	65.152	ENSCAPG00000006058	-	67	65.152	Cavia_aperea
ENSLACG00000006810	POLR1D	55	63.636	ENSCPOG00000030450	-	67	63.636	Cavia_porcellus
ENSLACG00000006810	POLR1D	68	64.634	ENSCCAG00000020191	-	69	64.634	Cebus_capucinus
ENSLACG00000006810	POLR1D	95	66.087	ENSCCAG00000021349	-	86	66.087	Cebus_capucinus
ENSLACG00000006810	POLR1D	96	65.517	ENSCATG00000030710	-	87	65.517	Cercocebus_atys
ENSLACG00000006810	POLR1D	95	55.652	ENSCATG00000022900	-	86	55.652	Cercocebus_atys
ENSLACG00000006810	POLR1D	96	65.517	ENSCLAG00000017623	POLR1D	94	65.517	Chinchilla_lanigera
ENSLACG00000006810	POLR1D	78	72.340	ENSCPBG00000004719	POLR1D	93	72.340	Chrysemys_picta_bellii
ENSLACG00000006810	POLR1D	95	63.478	ENSCANG00000037694	-	86	63.478	Colobus_angolensis_palliatus
ENSLACG00000006810	POLR1D	96	64.655	ENSCANG00000028632	-	87	64.655	Colobus_angolensis_palliatus
ENSLACG00000006810	POLR1D	95	65.217	ENSCGRG00001021251	Polr1d	86	65.217	Cricetulus_griseus_chok1gshd
ENSLACG00000006810	POLR1D	95	65.217	ENSCGRG00000011639	Polr1d	86	65.217	Cricetulus_griseus_crigri
ENSLACG00000006810	POLR1D	83	70.000	ENSCSEG00000018268	polr1d	91	67.290	Cynoglossus_semilaevis
ENSLACG00000006810	POLR1D	88	69.524	ENSCVAG00000018527	polr1d	92	69.524	Cyprinodon_variegatus
ENSLACG00000006810	POLR1D	89	64.486	ENSDARG00000037570	polr1d	96	64.486	Danio_rerio
ENSLACG00000006810	POLR1D	95	65.217	ENSDNOG00000043676	-	86	65.217	Dasypus_novemcinctus
ENSLACG00000006810	POLR1D	95	63.478	ENSDNOG00000046247	-	86	63.478	Dasypus_novemcinctus
ENSLACG00000006810	POLR1D	95	65.217	ENSDORG00000029155	Polr1d	86	65.217	Dipodomys_ordii
ENSLACG00000006810	POLR1D	75	47.826	FBgn0086447	l(2)37Cg	87	47.826	Drosophila_melanogaster
ENSLACG00000006810	POLR1D	91	70.909	ENSETEG00000012797	POLR1D	89	70.909	Echinops_telfairi
ENSLACG00000006810	POLR1D	73	75.000	ENSEBUG00000011748	polr1d	61	75.000	Eptatretus_burgeri
ENSLACG00000006810	POLR1D	96	65.517	ENSEASG00005022487	POLR1D	90	65.517	Equus_asinus_asinus
ENSLACG00000006810	POLR1D	96	66.379	ENSEEUG00000013144	POLR1D	94	66.379	Erinaceus_europaeus
ENSLACG00000006810	POLR1D	92	69.091	ENSELUG00000005105	rpac2	96	69.091	Esox_lucius
ENSLACG00000006810	POLR1D	96	65.517	ENSFCAG00000030162	POLR1D	87	65.517	Felis_catus
ENSLACG00000006810	POLR1D	83	72.727	ENSFALG00000011463	POLR1D	98	72.727	Ficedula_albicollis
ENSLACG00000006810	POLR1D	96	64.655	ENSFDAG00000004463	POLR1D	87	64.655	Fukomys_damarensis
ENSLACG00000006810	POLR1D	90	67.593	ENSFHEG00000015410	polr1d	93	67.593	Fundulus_heteroclitus
ENSLACG00000006810	POLR1D	57	68.116	ENSGALG00000007470	POLR1D	68	68.116	Gallus_gallus
ENSLACG00000006810	POLR1D	90	67.593	ENSGAFG00000001693	polr1d	94	67.593	Gambusia_affinis
ENSLACG00000006810	POLR1D	91	66.055	ENSGACG00000018585	polr1d	92	66.055	Gasterosteus_aculeatus
ENSLACG00000006810	POLR1D	87	75.962	ENSGAGG00000008503	POLR1D	91	75.962	Gopherus_agassizii
ENSLACG00000006810	POLR1D	95	66.087	ENSGGOG00000004235	POLR1D	86	66.087	Gorilla_gorilla
ENSLACG00000006810	POLR1D	90	68.807	ENSHBUG00000002111	polr1d	96	68.807	Haplochromis_burtoni
ENSLACG00000006810	POLR1D	96	63.793	ENSHGLG00000003202	POLR1D	87	63.793	Heterocephalus_glaber_female
ENSLACG00000006810	POLR1D	96	63.793	ENSHGLG00100009393	POLR1D	87	63.793	Heterocephalus_glaber_male
ENSLACG00000006810	POLR1D	88	65.714	ENSHCOG00000003258	polr1d	92	65.714	Hippocampus_comes
ENSLACG00000006810	POLR1D	88	69.524	ENSIPUG00000014810	polr1d	91	69.524	Ictalurus_punctatus
ENSLACG00000006810	POLR1D	95	66.087	ENSSTOG00000013877	POLR1D	86	66.087	Ictidomys_tridecemlineatus
ENSLACG00000006810	POLR1D	98	48.361	ENSJJAG00000021667	-	72	48.361	Jaculus_jaculus
ENSLACG00000006810	POLR1D	95	65.217	ENSJJAG00000022671	-	92	67.273	Jaculus_jaculus
ENSLACG00000006810	POLR1D	89	68.224	ENSKMAG00000015256	polr1d	93	68.224	Kryptolebias_marmoratus
ENSLACG00000006810	POLR1D	90	68.519	ENSLBEG00000015919	polr1d	94	68.519	Labrus_bergylta
ENSLACG00000006810	POLR1D	57	72.059	ENSLOCG00000014976	polr1d	92	72.059	Lepisosteus_oculatus
ENSLACG00000006810	POLR1D	96	65.517	ENSLAFG00000032290	POLR1D	87	65.517	Loxodonta_africana
ENSLACG00000006810	POLR1D	97	64.957	ENSMFAG00000045264	POLR1D	91	64.957	Macaca_fascicularis
ENSLACG00000006810	POLR1D	85	71.569	ENSMMUG00000020386	POLR1D	88	71.569	Macaca_mulatta
ENSLACG00000006810	POLR1D	73	67.045	ENSMMUG00000041570	-	79	67.045	Macaca_mulatta
ENSLACG00000006810	POLR1D	96	65.517	ENSMNEG00000008630	-	87	65.517	Macaca_nemestrina
ENSLACG00000006810	POLR1D	67	70.000	ENSMNEG00000038120	-	67	70.000	Macaca_nemestrina
ENSLACG00000006810	POLR1D	96	65.517	ENSMLEG00000041048	-	87	65.517	Mandrillus_leucophaeus
ENSLACG00000006810	POLR1D	95	55.652	ENSMLEG00000032251	-	86	55.652	Mandrillus_leucophaeus
ENSLACG00000006810	POLR1D	81	70.103	ENSMAMG00000014834	polr1d	91	70.103	Mastacembelus_armatus
ENSLACG00000006810	POLR1D	83	71.000	ENSMZEG00005006638	polr1d	88	71.000	Maylandia_zebra
ENSLACG00000006810	POLR1D	75	74.444	ENSMGAG00000005322	POLR1D	83	74.444	Meleagris_gallopavo
ENSLACG00000006810	POLR1D	95	65.217	ENSMAUG00000001946	Polr1d	86	65.217	Mesocricetus_auratus
ENSLACG00000006810	POLR1D	95	52.174	ENSMICG00000007349	-	86	52.174	Microcebus_murinus
ENSLACG00000006810	POLR1D	96	65.517	ENSMICG00000016883	-	87	65.517	Microcebus_murinus
ENSLACG00000006810	POLR1D	96	63.793	ENSMOCG00000021288	Polr1d	87	63.793	Microtus_ochrogaster
ENSLACG00000006810	POLR1D	90	67.890	ENSMMOG00000009605	polr1d	96	67.890	Mola_mola
ENSLACG00000006810	POLR1D	89	73.148	ENSMODG00000023881	POLR1D	95	73.148	Monodelphis_domestica
ENSLACG00000006810	POLR1D	90	67.593	ENSMALG00000010652	polr1d	94	67.593	Monopterus_albus
ENSLACG00000006810	POLR1D	93	65.487	MGP_CAROLIEiJ_G0028034	Polr1d	85	65.487	Mus_caroli
ENSLACG00000006810	POLR1D	96	63.793	ENSMUSG00000029642	Polr1d	87	63.793	Mus_musculus
ENSLACG00000006810	POLR1D	96	63.793	MGP_PahariEiJ_G0024600	Polr1d	87	63.793	Mus_pahari
ENSLACG00000006810	POLR1D	96	64.655	MGP_SPRETEiJ_G0029032	Polr1d	87	64.655	Mus_spretus
ENSLACG00000006810	POLR1D	95	65.217	ENSMLUG00000027169	-	86	65.217	Myotis_lucifugus
ENSLACG00000006810	POLR1D	96	60.345	ENSMLUG00000004118	-	87	60.345	Myotis_lucifugus
ENSLACG00000006810	POLR1D	87	70.192	ENSNGAG00000006014	Polr1d	90	70.192	Nannospalax_galili
ENSLACG00000006810	POLR1D	90	68.807	ENSNBRG00000020327	polr1d	96	68.807	Neolamprologus_brichardi
ENSLACG00000006810	POLR1D	95	66.087	ENSNLEG00000000358	POLR1D	86	66.087	Nomascus_leucogenys
ENSLACG00000006810	POLR1D	96	55.172	ENSODEG00000014801	-	86	55.172	Octodon_degus
ENSLACG00000006810	POLR1D	96	66.379	ENSODEG00000005294	-	87	66.379	Octodon_degus
ENSLACG00000006810	POLR1D	87	76.923	ENSOANG00000008708	-	94	75.490	Ornithorhynchus_anatinus
ENSLACG00000006810	POLR1D	96	65.517	ENSOCUG00000015706	POLR1D	71	65.517	Oryctolagus_cuniculus
ENSLACG00000006810	POLR1D	90	69.725	ENSORLG00000010257	polr1d	96	69.725	Oryzias_latipes
ENSLACG00000006810	POLR1D	93	67.257	ENSORLG00020000533	polr1d	76	67.257	Oryzias_latipes_hni
ENSLACG00000006810	POLR1D	93	66.372	ENSORLG00015013267	polr1d	75	66.372	Oryzias_latipes_hsok
ENSLACG00000006810	POLR1D	89	68.224	ENSOMEG00000014912	polr1d	71	68.224	Oryzias_melastigma
ENSLACG00000006810	POLR1D	96	64.655	ENSOGAG00000014601	POLR1D	87	64.655	Otolemur_garnettii
ENSLACG00000006810	POLR1D	97	65.289	ENSOARG00000017005	POLR1D	93	65.289	Ovis_aries
ENSLACG00000006810	POLR1D	95	66.087	ENSPPAG00000028138	POLR1D	86	66.087	Pan_paniscus
ENSLACG00000006810	POLR1D	96	65.517	ENSPPRG00000003381	POLR1D	87	65.517	Panthera_pardus
ENSLACG00000006810	POLR1D	96	65.517	ENSPTIG00000018137	POLR1D	87	65.517	Panthera_tigris_altaica
ENSLACG00000006810	POLR1D	95	66.087	ENSPTRG00000005734	POLR1D	86	66.087	Pan_troglodytes
ENSLACG00000006810	POLR1D	96	65.517	ENSPANG00000020259	-	87	65.517	Papio_anubis
ENSLACG00000006810	POLR1D	95	54.783	ENSPANG00000035051	-	86	54.783	Papio_anubis
ENSLACG00000006810	POLR1D	88	72.642	ENSPKIG00000021891	polr1d	96	52.066	Paramormyrops_kingsleyae
ENSLACG00000006810	POLR1D	92	70.270	ENSPSIG00000011822	POLR1D	85	70.270	Pelodiscus_sinensis
ENSLACG00000006810	POLR1D	87	71.154	ENSPMGG00000010359	polr1d	90	71.154	Periophthalmus_magnuspinnatus
ENSLACG00000006810	POLR1D	87	61.538	ENSPMGG00000012998	POLR1D	75	61.538	Periophthalmus_magnuspinnatus
ENSLACG00000006810	POLR1D	95	62.609	ENSPEMG00000006336	-	88	62.609	Peromyscus_maniculatus_bairdii
ENSLACG00000006810	POLR1D	89	64.486	ENSPMAG00000004228	polr1d	90	64.486	Petromyzon_marinus
ENSLACG00000006810	POLR1D	89	72.222	ENSPCIG00000001673	POLR1D	95	72.222	Phascolarctos_cinereus
ENSLACG00000006810	POLR1D	90	67.593	ENSPFOG00000023343	polr1d	97	73.810	Poecilia_formosa
ENSLACG00000006810	POLR1D	90	67.593	ENSPLAG00000009675	polr1d	94	67.593	Poecilia_latipinna
ENSLACG00000006810	POLR1D	90	67.593	ENSPMEG00000004628	polr1d	94	67.593	Poecilia_mexicana
ENSLACG00000006810	POLR1D	90	67.593	ENSPREG00000022032	polr1d	94	67.593	Poecilia_reticulata
ENSLACG00000006810	POLR1D	96	64.655	ENSPCOG00000028175	POLR1D	87	64.655	Propithecus_coquereli
ENSLACG00000006810	POLR1D	90	68.807	ENSPNYG00000000107	polr1d	96	68.807	Pundamilia_nyererei
ENSLACG00000006810	POLR1D	89	64.815	ENSPNAG00000001512	polr1d	93	63.964	Pygocentrus_nattereri
ENSLACG00000006810	POLR1D	95	64.348	ENSRBIG00000000336	-	86	64.348	Rhinopithecus_bieti
ENSLACG00000006810	POLR1D	96	65.517	ENSRBIG00000036378	-	87	65.517	Rhinopithecus_bieti
ENSLACG00000006810	POLR1D	96	65.517	ENSRROG00000042232	-	87	65.517	Rhinopithecus_roxellana
ENSLACG00000006810	POLR1D	95	64.348	ENSRROG00000026751	-	86	64.348	Rhinopithecus_roxellana
ENSLACG00000006810	POLR1D	74	52.809	YNL113W	RPC19	63	52.809	Saccharomyces_cerevisiae
ENSLACG00000006810	POLR1D	87	60.952	ENSSBOG00000030146	-	77	60.952	Saimiri_boliviensis_boliviensis
ENSLACG00000006810	POLR1D	95	66.087	ENSSBOG00000028482	-	86	66.087	Saimiri_boliviensis_boliviensis
ENSLACG00000006810	POLR1D	88	71.429	ENSSHAG00000001190	POLR1D	81	71.429	Sarcophilus_harrisii
ENSLACG00000006810	POLR1D	89	71.963	ENSSFOG00015011375	polr1d	94	71.963	Scleropages_formosus
ENSLACG00000006810	POLR1D	90	68.519	ENSSMAG00000011861	polr1d	94	68.519	Scophthalmus_maximus
ENSLACG00000006810	POLR1D	90	67.593	ENSSDUG00000011930	polr1d	94	67.593	Seriola_dumerili
ENSLACG00000006810	POLR1D	85	67.647	ENSSLDG00000023871	polr1d	86	67.647	Seriola_lalandi_dorsalis
ENSLACG00000006810	POLR1D	95	66.087	ENSSARG00000007840	POLR1D	86	66.087	Sorex_araneus
ENSLACG00000006810	POLR1D	87	70.476	ENSSPUG00000005786	POLR1D	90	70.476	Sphenodon_punctatus
ENSLACG00000006810	POLR1D	90	66.972	ENSSPAG00000011764	polr1d	96	66.972	Stegastes_partitus
ENSLACG00000006810	POLR1D	94	65.789	ENSSSCG00000009310	POLR1D	86	65.789	Sus_scrofa
ENSLACG00000006810	POLR1D	78	73.118	ENSTGUG00000005450	POLR1D	97	73.118	Taeniopygia_guttata
ENSLACG00000006810	POLR1D	92	65.766	ENSTRUG00000019741	polr1d	96	65.766	Takifugu_rubripes
ENSLACG00000006810	POLR1D	95	65.217	ENSTBEG00000007006	POLR1D	93	65.217	Tupaia_belangeri
ENSLACG00000006810	POLR1D	95	66.087	ENSUAMG00000011413	POLR1D	86	66.087	Ursus_americanus
ENSLACG00000006810	POLR1D	95	66.087	ENSUMAG00000016968	POLR1D	90	66.087	Ursus_maritimus
ENSLACG00000006810	POLR1D	95	66.087	ENSVVUG00000009216	POLR1D	86	66.087	Vulpes_vulpes
ENSLACG00000006810	POLR1D	81	71.134	ENSXCOG00000011731	polr1d	74	71.134	Xiphophorus_couchianus
ENSLACG00000006810	POLR1D	81	72.165	ENSXMAG00000017538	polr1d	74	72.165	Xiphophorus_maculatus