EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000006973 (Gene tree)
Gene ID: 102356150
Gene Symbol: NOB1
Alias: ART-4|MST158|NOB1P|PSMD8BP1
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 20082 bases
Position: chrJH127961.1:248072-268153
Accession: 102356150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000007878	NOB1_Zn_bind	PF08772.11	3.9e-31	1	1
ENSLACP00000007877	NOB1_Zn_bind	PF08772.11	4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000007943	NOB1-201	5248	XM_006006757	ENSLACP00000007877	456 (aa)	XP_006006819	H3AE06
ENSLACT00000007944	NOB1-202	1338	-	ENSLACP00000007878	445 (aa)	-	H3AE07

Gene Model

Click here to download ENSLACG00000006973's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000006973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000006973	NOB1	98	64.073	ENSG00000141101	NOB1	98	78.462	Homo_sapiens
ENSLACG00000006973	NOB1	100	54.386	ENSAPOG00000008241	nob1	100	55.936	Acanthochromis_polyacanthus
ENSLACG00000006973	NOB1	99	63.098	ENSAMEG00000006706	NOB1	99	62.642	Ailuropoda_melanoleuca
ENSLACG00000006973	NOB1	98	64.220	ENSACIG00000001503	nob1	100	64.220	Amphilophus_citrinellus
ENSLACG00000006973	NOB1	98	64.155	ENSAOCG00000006533	nob1	100	63.470	Amphiprion_ocellaris
ENSLACG00000006973	NOB1	98	63.927	ENSAPEG00000000032	-	100	63.242	Amphiprion_percula
ENSLACG00000006973	NOB1	98	63.927	ENSAPEG00000000029	nob1	100	63.242	Amphiprion_percula
ENSLACG00000006973	NOB1	98	61.644	ENSATEG00000014585	nob1	100	61.416	Anabas_testudineus
ENSLACG00000006973	NOB1	98	62.642	ENSACAG00000003697	NOB1	88	62.642	Anolis_carolinensis
ENSLACG00000006973	NOB1	98	64.220	ENSANAG00000036611	NOB1	100	64.220	Aotus_nancymaae
ENSLACG00000006973	NOB1	98	63.098	ENSACLG00000024897	nob1	100	63.409	Astatotilapia_calliptera
ENSLACG00000006973	NOB1	95	63.908	ENSAMXG00000003642	nob1	100	64.450	Astyanax_mexicanus
ENSLACG00000006973	NOB1	98	65.068	ENSBTAG00000020633	NOB1	100	64.612	Bos_taurus
ENSLACG00000006973	NOB1	68	44.724	WBGene00021843	Y54E10BR.4	96	44.390	Caenorhabditis_elegans
ENSLACG00000006973	NOB1	98	64.612	ENSCJAG00000015230	NOB1	100	64.612	Callithrix_jacchus
ENSLACG00000006973	NOB1	98	63.761	ENSCAFG00000020251	NOB1	100	64.302	Canis_familiaris
ENSLACG00000006973	NOB1	98	63.761	ENSCAFG00020020297	NOB1	100	64.302	Canis_lupus_dingo
ENSLACG00000006973	NOB1	98	64.384	ENSCHIG00000027022	NOB1	100	64.840	Capra_hircus
ENSLACG00000006973	NOB1	98	65.596	ENSTSYG00000003084	NOB1	100	66.055	Carlito_syrichta
ENSLACG00000006973	NOB1	83	60.811	ENSCAPG00000015542	NOB1	100	61.622	Cavia_aperea
ENSLACG00000006973	NOB1	98	63.073	ENSCPOG00000022538	NOB1	100	63.761	Cavia_porcellus
ENSLACG00000006973	NOB1	98	64.384	ENSCCAG00000023773	NOB1	100	65.068	Cebus_capucinus
ENSLACG00000006973	NOB1	98	63.781	ENSCATG00000039487	NOB1	100	64.840	Cercocebus_atys
ENSLACG00000006973	NOB1	83	60.000	ENSCLAG00000005926	NOB1	100	60.000	Chinchilla_lanigera
ENSLACG00000006973	NOB1	99	62.281	ENSCSAG00000004158	NOB1	100	64.531	Chlorocebus_sabaeus
ENSLACG00000006973	NOB1	98	60.321	ENSCHOG00000011047	NOB1	100	59.174	Choloepus_hoffmanni
ENSLACG00000006973	NOB1	98	68.578	ENSCPBG00000027035	NOB1	93	68.578	Chrysemys_picta_bellii
ENSLACG00000006973	NOB1	99	45.395	ENSCING00000023441	-	99	46.032	Ciona_intestinalis
ENSLACG00000006973	NOB1	100	45.000	ENSCSAVG00000009081	-	100	46.413	Ciona_savignyi
ENSLACG00000006973	NOB1	98	65.675	ENSCGRG00001009255	Nob1	95	66.133	Cricetulus_griseus_chok1gshd
ENSLACG00000006973	NOB1	98	65.826	ENSCGRG00000010869	Nob1	100	66.284	Cricetulus_griseus_crigri
ENSLACG00000006973	NOB1	88	61.347	ENSCSEG00000019657	nob1	92	62.660	Cynoglossus_semilaevis
ENSLACG00000006973	NOB1	99	63.956	ENSDARG00000016080	nob1	100	64.126	Danio_rerio
ENSLACG00000006973	NOB1	98	65.367	ENSDNOG00000041643	NOB1	100	65.596	Dasypus_novemcinctus
ENSLACG00000006973	NOB1	98	63.303	ENSDORG00000000483	Nob1	100	63.303	Dipodomys_ordii
ENSLACG00000006973	NOB1	97	39.203	FBgn0030177	CG2972	98	38.771	Drosophila_melanogaster
ENSLACG00000006973	NOB1	63	48.097	ENSETEG00000000011	-	59	50.370	Echinops_telfairi
ENSLACG00000006973	NOB1	98	44.639	ENSEBUG00000004464	nob1	98	44.760	Eptatretus_burgeri
ENSLACG00000006973	NOB1	98	64.237	ENSEASG00005021356	NOB1	84	65.138	Equus_asinus_asinus
ENSLACG00000006973	NOB1	98	64.237	ENSECAG00000023748	NOB1	81	65.138	Equus_caballus
ENSLACG00000006973	NOB1	71	47.059	ENSEEUG00000014384	NOB1	66	46.885	Erinaceus_europaeus
ENSLACG00000006973	NOB1	100	64.163	ENSELUG00000016199	nob1	100	62.281	Esox_lucius
ENSLACG00000006973	NOB1	98	64.908	ENSFCAG00000002958	NOB1	100	64.531	Felis_catus
ENSLACG00000006973	NOB1	98	63.761	ENSFDAG00000009239	NOB1	100	63.991	Fukomys_damarensis
ENSLACG00000006973	NOB1	98	65.287	ENSGMOG00000010638	nob1	99	65.747	Gadus_morhua
ENSLACG00000006973	NOB1	98	59.268	ENSGALG00000000693	NOB1	100	59.268	Gallus_gallus
ENSLACG00000006973	NOB1	100	56.959	ENSGAFG00000006104	nob1	100	54.737	Gambusia_affinis
ENSLACG00000006973	NOB1	98	61.327	ENSGACG00000017552	nob1	99	62.471	Gasterosteus_aculeatus
ENSLACG00000006973	NOB1	98	67.890	ENSGAGG00000003902	NOB1	100	67.890	Gopherus_agassizii
ENSLACG00000006973	NOB1	98	64.302	ENSGGOG00000025456	NOB1	100	65.367	Gorilla_gorilla
ENSLACG00000006973	NOB1	98	63.927	ENSHBUG00000002580	nob1	100	63.470	Haplochromis_burtoni
ENSLACG00000006973	NOB1	98	65.138	ENSHGLG00000014260	NOB1	100	64.679	Heterocephalus_glaber_female
ENSLACG00000006973	NOB1	98	65.138	ENSHGLG00100013978	NOB1	100	64.679	Heterocephalus_glaber_male
ENSLACG00000006973	NOB1	98	57.466	ENSHCOG00000006699	nob1	100	57.666	Hippocampus_comes
ENSLACG00000006973	NOB1	100	60.083	ENSIPUG00000007579	nob1	100	59.875	Ictalurus_punctatus
ENSLACG00000006973	NOB1	98	64.450	ENSSTOG00000001204	NOB1	100	64.679	Ictidomys_tridecemlineatus
ENSLACG00000006973	NOB1	98	63.532	ENSJJAG00000015543	Nob1	100	63.303	Jaculus_jaculus
ENSLACG00000006973	NOB1	98	64.612	ENSKMAG00000018220	nob1	100	63.657	Kryptolebias_marmoratus
ENSLACG00000006973	NOB1	98	64.612	ENSLBEG00000026375	nob1	100	64.237	Labrus_bergylta
ENSLACG00000006973	NOB1	100	63.499	ENSLOCG00000001411	nob1	99	63.383	Lepisosteus_oculatus
ENSLACG00000006973	NOB1	98	64.840	ENSLAFG00000008978	NOB1	100	65.000	Loxodonta_africana
ENSLACG00000006973	NOB1	98	63.699	ENSMFAG00000030131	NOB1	100	64.384	Macaca_fascicularis
ENSLACG00000006973	NOB1	98	63.554	ENSMMUG00000006506	NOB1	100	64.237	Macaca_mulatta
ENSLACG00000006973	NOB1	99	62.864	ENSMNEG00000028829	NOB1	100	59.132	Macaca_nemestrina
ENSLACG00000006973	NOB1	98	64.237	ENSMLEG00000032913	NOB1	100	65.138	Mandrillus_leucophaeus
ENSLACG00000006973	NOB1	98	63.014	ENSMZEG00005028346	nob1	100	62.100	Maylandia_zebra
ENSLACG00000006973	NOB1	64	60.211	ENSMZEG00005003827	-	86	61.053	Maylandia_zebra
ENSLACG00000006973	NOB1	62	67.273	ENSMGAG00000008675	NOB1	98	66.308	Meleagris_gallopavo
ENSLACG00000006973	NOB1	98	63.761	ENSMAUG00000013554	Nob1	100	63.991	Mesocricetus_auratus
ENSLACG00000006973	NOB1	98	64.155	ENSMICG00000012123	NOB1	100	64.612	Microcebus_murinus
ENSLACG00000006973	NOB1	98	65.367	ENSMOCG00000010370	Nob1	100	64.908	Microtus_ochrogaster
ENSLACG00000006973	NOB1	100	61.002	ENSMMOG00000002120	nob1	100	62.443	Mola_mola
ENSLACG00000006973	NOB1	98	64.027	ENSMODG00000002677	NOB1	100	64.706	Monodelphis_domestica
ENSLACG00000006973	NOB1	98	61.327	ENSMALG00000014580	nob1	100	61.098	Monopterus_albus
ENSLACG00000006973	NOB1	98	64.908	MGP_CAROLIEiJ_G0031536	Nob1	98	64.302	Mus_caroli
ENSLACG00000006973	NOB1	98	64.908	ENSMUSG00000003848	Nob1	100	64.220	Mus_musculus
ENSLACG00000006973	NOB1	98	65.826	MGP_PahariEiJ_G0023136	Nob1	100	66.284	Mus_pahari
ENSLACG00000006973	NOB1	98	65.138	MGP_SPRETEiJ_G0032654	Nob1	98	65.826	Mus_spretus
ENSLACG00000006973	NOB1	99	63.098	ENSMPUG00000007483	NOB1	92	63.636	Mustela_putorius_furo
ENSLACG00000006973	NOB1	98	63.470	ENSMLUG00000006667	NOB1	100	64.155	Myotis_lucifugus
ENSLACG00000006973	NOB1	98	63.991	ENSNGAG00000008627	Nob1	100	64.220	Nannospalax_galili
ENSLACG00000006973	NOB1	98	63.781	ENSNLEG00000005572	NOB1	100	64.840	Nomascus_leucogenys
ENSLACG00000006973	NOB1	78	61.383	ENSOPRG00000006721	NOB1	100	62.248	Ochotona_princeps
ENSLACG00000006973	NOB1	98	61.872	ENSODEG00000014376	NOB1	100	62.557	Octodon_degus
ENSLACG00000006973	NOB1	99	60.699	ENSONIG00000003319	nob1	99	62.022	Oreochromis_niloticus
ENSLACG00000006973	NOB1	83	62.735	ENSOCUG00000004400	NOB1	100	62.198	Oryctolagus_cuniculus
ENSLACG00000006973	NOB1	98	60.959	ENSORLG00000018862	nob1	100	60.502	Oryzias_latipes
ENSLACG00000006973	NOB1	100	59.211	ENSORLG00020014687	nob1	100	60.502	Oryzias_latipes_hni
ENSLACG00000006973	NOB1	98	60.731	ENSORLG00015012156	nob1	100	60.274	Oryzias_latipes_hsok
ENSLACG00000006973	NOB1	100	56.468	ENSOMEG00000022722	nob1	100	57.325	Oryzias_melastigma
ENSLACG00000006973	NOB1	99	58.114	ENSOGAG00000004590	NOB1	100	60.274	Otolemur_garnettii
ENSLACG00000006973	NOB1	98	63.699	ENSOARG00000003606	NOB1	100	64.155	Ovis_aries
ENSLACG00000006973	NOB1	96	58.879	ENSPPAG00000003317	-	100	59.390	Pan_paniscus
ENSLACG00000006973	NOB1	98	64.073	ENSPPAG00000040257	NOB1	100	65.138	Pan_paniscus
ENSLACG00000006973	NOB1	98	64.220	ENSPPRG00000016949	NOB1	100	64.531	Panthera_pardus
ENSLACG00000006973	NOB1	98	64.220	ENSPTIG00000011234	NOB1	100	64.840	Panthera_tigris_altaica
ENSLACG00000006973	NOB1	98	64.302	ENSPTRG00000008285	NOB1	100	65.367	Pan_troglodytes
ENSLACG00000006973	NOB1	98	64.920	ENSPANG00000015858	NOB1	100	65.297	Papio_anubis
ENSLACG00000006973	NOB1	98	67.352	ENSPKIG00000020293	nob1	100	68.265	Paramormyrops_kingsleyae
ENSLACG00000006973	NOB1	98	64.465	ENSPSIG00000012477	NOB1	99	64.516	Pelodiscus_sinensis
ENSLACG00000006973	NOB1	98	65.668	ENSPEMG00000010995	Nob1	99	66.359	Peromyscus_maniculatus_bairdii
ENSLACG00000006973	NOB1	83	57.825	ENSPFOG00000000027	nob1	100	58.355	Poecilia_formosa
ENSLACG00000006973	NOB1	63	58.099	ENSPLAG00000011546	nob1	95	58.803	Poecilia_latipinna
ENSLACG00000006973	NOB1	100	55.158	ENSPMEG00000023435	nob1	100	57.082	Poecilia_mexicana
ENSLACG00000006973	NOB1	99	56.197	ENSPREG00000007675	nob1	100	56.803	Poecilia_reticulata
ENSLACG00000006973	NOB1	98	63.699	ENSPPYG00000007509	NOB1	100	64.220	Pongo_abelii
ENSLACG00000006973	NOB1	98	63.242	ENSPCAG00000001527	NOB1	100	63.122	Procavia_capensis
ENSLACG00000006973	NOB1	98	64.840	ENSPCOG00000025515	NOB1	100	65.297	Propithecus_coquereli
ENSLACG00000006973	NOB1	80	41.918	ENSPVAG00000013330	NOB1	78	43.228	Pteropus_vampyrus
ENSLACG00000006973	NOB1	100	61.707	ENSPNYG00000018449	nob1	100	64.009	Pundamilia_nyererei
ENSLACG00000006973	NOB1	100	63.377	ENSPNAG00000004244	nob1	99	64.176	Pygocentrus_nattereri
ENSLACG00000006973	NOB1	98	66.055	ENSRNOG00000021890	Nob1	100	65.826	Rattus_norvegicus
ENSLACG00000006973	NOB1	98	63.326	ENSRBIG00000019599	NOB1	100	64.908	Rhinopithecus_bieti
ENSLACG00000006973	NOB1	98	63.326	ENSRROG00000033419	NOB1	100	64.908	Rhinopithecus_roxellana
ENSLACG00000006973	NOB1	85	59.847	ENSSBOG00000029042	NOB1	89	61.394	Saimiri_boliviensis_boliviensis
ENSLACG00000006973	NOB1	98	66.743	ENSSHAG00000015387	NOB1	100	66.055	Sarcophilus_harrisii
ENSLACG00000006973	NOB1	100	67.982	ENSSFOG00015008503	nob1	100	68.326	Scleropages_formosus
ENSLACG00000006973	NOB1	98	61.991	ENSSMAG00000003064	nob1	100	63.014	Scophthalmus_maximus
ENSLACG00000006973	NOB1	98	64.155	ENSSDUG00000007307	nob1	100	62.557	Seriola_dumerili
ENSLACG00000006973	NOB1	64	77.778	ENSSLDG00000011459	-	97	76.879	Seriola_lalandi_dorsalis
ENSLACG00000006973	NOB1	95	57.077	ENSSPUG00000005621	NOB1	99	63.043	Sphenodon_punctatus
ENSLACG00000006973	NOB1	98	63.699	ENSSPAG00000022362	nob1	100	63.927	Stegastes_partitus
ENSLACG00000006973	NOB1	98	65.826	ENSSSCG00000002753	NOB1	100	65.596	Sus_scrofa
ENSLACG00000006973	NOB1	98	61.726	ENSTRUG00000004780	nob1	100	61.726	Takifugu_rubripes
ENSLACG00000006973	NOB1	98	61.726	ENSTRUG00000023145	nob1	100	61.726	Takifugu_rubripes
ENSLACG00000006973	NOB1	99	59.560	ENSTNIG00000002552	nob1	100	60.412	Tetraodon_nigroviridis
ENSLACG00000006973	NOB1	61	54.779	ENSTBEG00000000690	NOB1	52	54.779	Tupaia_belangeri
ENSLACG00000006973	NOB1	60	61.567	ENSUAMG00000028135	NOB1	99	61.338	Ursus_americanus
ENSLACG00000006973	NOB1	100	62.697	ENSUMAG00000018658	NOB1	96	62.780	Ursus_maritimus
ENSLACG00000006973	NOB1	98	63.761	ENSVVUG00000017271	NOB1	100	64.302	Vulpes_vulpes
ENSLACG00000006973	NOB1	100	62.281	ENSXETG00000017874	nob1	99	60.699	Xenopus_tropicalis
ENSLACG00000006973	NOB1	83	56.452	ENSXCOG00000009734	nob1	100	55.376	Xiphophorus_couchianus
ENSLACG00000006973	NOB1	100	55.677	ENSXMAG00000017371	nob1	100	57.500	Xiphophorus_maculatus