EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000007091 (Gene tree)
Gene ID: 102354964
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 58397 bases
Position: chrJH127426.1:254950-313346
Accession: 102354964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008012	ResIII	PF04851.15	1.5e-11	1	1
ENSLACP00000008012	DEAD	PF00270.29	9.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008078	SMARCA5-201	3914	XM_006002881	ENSLACP00000008012	1017 (aa)	XP_006002943	H3AEE1

Gene Model

Click here to download ENSLACG00000007091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000007091	SMARCA5	54	41.906	ENSLACG00000006262	CHD1L	53	41.906
ENSLACG00000007091	SMARCA5	97	88.289	ENSLACG00000016697	SMARCA1	97	88.289

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007091	SMARCA5	97	95.358	ENSG00000153147	SMARCA5	94	95.358	Homo_sapiens
ENSLACG00000007091	SMARCA5	97	95.661	ENSAMEG00000009585	SMARCA5	94	95.661	Ailuropoda_melanoleuca
ENSLACG00000007091	SMARCA5	94	95.576	ENSAPLG00000009206	SMARCA5	99	95.576	Anas_platyrhynchos
ENSLACG00000007091	SMARCA5	97	95.330	ENSACAG00000003038	SMARCA5	95	95.330	Anolis_carolinensis
ENSLACG00000007091	SMARCA5	97	95.358	ENSANAG00000019345	SMARCA5	99	95.358	Aotus_nancymaae
ENSLACG00000007091	SMARCA5	98	95.105	ENSBTAG00000003399	SMARCA5	94	96.049	Bos_taurus
ENSLACG00000007091	SMARCA5	97	95.459	ENSCJAG00000002735	SMARCA5	94	95.459	Callithrix_jacchus
ENSLACG00000007091	SMARCA5	97	95.661	ENSCAFG00000007525	SMARCA5	94	95.661	Canis_familiaris
ENSLACG00000007091	SMARCA5	95	96.182	ENSCAFG00020025641	SMARCA5	93	96.182	Canis_lupus_dingo
ENSLACG00000007091	SMARCA5	97	94.507	ENSCHIG00000016375	-	95	94.507	Capra_hircus
ENSLACG00000007091	SMARCA5	97	96.049	ENSCHIG00000013730	-	94	96.049	Capra_hircus
ENSLACG00000007091	SMARCA5	98	95.005	ENSTSYG00000009954	SMARCA5	99	95.560	Carlito_syrichta
ENSLACG00000007091	SMARCA5	95	95.975	ENSCAPG00000013747	SMARCA5	95	95.975	Cavia_aperea
ENSLACG00000007091	SMARCA5	97	95.257	ENSCPOG00000002259	SMARCA5	94	95.257	Cavia_porcellus
ENSLACG00000007091	SMARCA5	97	95.459	ENSCCAG00000027215	SMARCA5	99	95.459	Cebus_capucinus
ENSLACG00000007091	SMARCA5	97	95.358	ENSCATG00000044917	SMARCA5	94	95.358	Cercocebus_atys
ENSLACG00000007091	SMARCA5	97	95.358	ENSCLAG00000006153	SMARCA5	99	95.358	Chinchilla_lanigera
ENSLACG00000007091	SMARCA5	95	96.392	ENSCSAG00000003448	SMARCA5	100	96.392	Chlorocebus_sabaeus
ENSLACG00000007091	SMARCA5	86	95.791	ENSCHOG00000011724	SMARCA5	83	95.791	Choloepus_hoffmanni
ENSLACG00000007091	SMARCA5	97	95.661	ENSCPBG00000027535	SMARCA5	95	95.661	Chrysemys_picta_bellii
ENSLACG00000007091	SMARCA5	99	94.616	ENSCANG00000041629	SMARCA5	95	94.616	Colobus_angolensis_palliatus
ENSLACG00000007091	SMARCA5	97	95.459	ENSCGRG00001012719	Smarca5	94	95.459	Cricetulus_griseus_chok1gshd
ENSLACG00000007091	SMARCA5	98	95.090	ENSCGRG00000001417	Smarca5	98	95.459	Cricetulus_griseus_crigri
ENSLACG00000007091	SMARCA5	97	93.138	ENSDNOG00000009158	SMARCA5	94	93.138	Dasypus_novemcinctus
ENSLACG00000007091	SMARCA5	93	89.018	ENSDORG00000003466	Smarca5	97	89.018	Dipodomys_ordii
ENSLACG00000007091	SMARCA5	95	85.449	ENSEBUG00000014773	SMARCA5	96	85.449	Eptatretus_burgeri
ENSLACG00000007091	SMARCA5	97	95.661	ENSEASG00005001866	SMARCA5	98	97.694	Equus_asinus_asinus
ENSLACG00000007091	SMARCA5	97	95.661	ENSECAG00000002676	SMARCA5	94	95.661	Equus_caballus
ENSLACG00000007091	SMARCA5	97	91.322	ENSEEUG00000013176	SMARCA5	99	91.165	Erinaceus_europaeus
ENSLACG00000007091	SMARCA5	95	89.381	ENSELUG00000014653	SMARCA5	99	89.381	Esox_lucius
ENSLACG00000007091	SMARCA5	97	95.661	ENSFCAG00000004544	SMARCA5	94	95.661	Felis_catus
ENSLACG00000007091	SMARCA5	95	96.701	ENSFALG00000004987	SMARCA5	100	96.701	Ficedula_albicollis
ENSLACG00000007091	SMARCA5	97	95.459	ENSFDAG00000021016	SMARCA5	99	95.459	Fukomys_damarensis
ENSLACG00000007091	SMARCA5	99	86.733	ENSGMOG00000007519	SMARCA5	96	87.663	Gadus_morhua
ENSLACG00000007091	SMARCA5	97	95.762	ENSGALG00000009913	SMARCA5	95	95.762	Gallus_gallus
ENSLACG00000007091	SMARCA5	97	89.260	ENSGACG00000017238	SMARCA5	96	89.260	Gasterosteus_aculeatus
ENSLACG00000007091	SMARCA5	97	95.762	ENSGAGG00000019882	SMARCA5	95	95.762	Gopherus_agassizii
ENSLACG00000007091	SMARCA5	97	95.358	ENSGGOG00000012595	SMARCA5	99	95.358	Gorilla_gorilla
ENSLACG00000007091	SMARCA5	97	86.176	ENSHGLG00000000317	-	94	86.176	Heterocephalus_glaber_female
ENSLACG00000007091	SMARCA5	99	94.516	ENSHGLG00000000816	-	95	94.516	Heterocephalus_glaber_female
ENSLACG00000007091	SMARCA5	97	95.358	ENSHGLG00100018421	-	99	95.358	Heterocephalus_glaber_male
ENSLACG00000007091	SMARCA5	97	95.459	ENSSTOG00000010683	SMARCA5	94	95.459	Ictidomys_tridecemlineatus
ENSLACG00000007091	SMARCA5	97	95.156	ENSJJAG00000014965	Smarca5	94	95.156	Jaculus_jaculus
ENSLACG00000007091	SMARCA5	97	92.668	ENSLOCG00000008966	SMARCA5	96	92.487	Lepisosteus_oculatus
ENSLACG00000007091	SMARCA5	97	95.661	ENSLAFG00000007795	SMARCA5	94	95.661	Loxodonta_africana
ENSLACG00000007091	SMARCA5	97	95.358	ENSMFAG00000043649	SMARCA5	94	95.358	Macaca_fascicularis
ENSLACG00000007091	SMARCA5	97	95.358	ENSMMUG00000000829	SMARCA5	97	96.938	Macaca_mulatta
ENSLACG00000007091	SMARCA5	97	95.358	ENSMNEG00000031916	SMARCA5	94	95.358	Macaca_nemestrina
ENSLACG00000007091	SMARCA5	97	95.358	ENSMLEG00000042393	SMARCA5	94	95.358	Mandrillus_leucophaeus
ENSLACG00000007091	SMARCA5	99	94.544	ENSMGAG00000003517	SMARCA5	99	94.544	Meleagris_gallopavo
ENSLACG00000007091	SMARCA5	97	95.459	ENSMAUG00000015902	Smarca5	97	95.459	Mesocricetus_auratus
ENSLACG00000007091	SMARCA5	97	95.560	ENSMICG00000003971	SMARCA5	99	94.082	Microcebus_murinus
ENSLACG00000007091	SMARCA5	97	95.257	ENSMOCG00000016986	-	94	95.257	Microtus_ochrogaster
ENSLACG00000007091	SMARCA5	97	95.863	ENSMODG00000000391	SMARCA5	94	95.863	Monodelphis_domestica
ENSLACG00000007091	SMARCA5	99	94.616	ENSMUSG00000031715	Smarca5	95	94.616	Mus_musculus
ENSLACG00000007091	SMARCA5	99	94.716	MGP_PahariEiJ_G0022862	Smarca5	95	94.716	Mus_pahari
ENSLACG00000007091	SMARCA5	97	95.661	ENSMLUG00000000468	SMARCA5	94	95.661	Myotis_lucifugus
ENSLACG00000007091	SMARCA5	98	95.000	ENSNGAG00000000441	Smarca5	95	95.000	Nannospalax_galili
ENSLACG00000007091	SMARCA5	97	95.358	ENSNLEG00000005383	SMARCA5	94	95.358	Nomascus_leucogenys
ENSLACG00000007091	SMARCA5	95	89.164	ENSMEUG00000001267	SMARCA5	100	89.164	Notamacropus_eugenii
ENSLACG00000007091	SMARCA5	88	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSLACG00000007091	SMARCA5	95	97.010	ENSOANG00000013921	SMARCA5	100	97.010	Ornithorhynchus_anatinus
ENSLACG00000007091	SMARCA5	95	96.598	ENSOCUG00000013042	SMARCA5	100	96.598	Oryctolagus_cuniculus
ENSLACG00000007091	SMARCA5	97	95.560	ENSOGAG00000009702	SMARCA5	94	95.560	Otolemur_garnettii
ENSLACG00000007091	SMARCA5	97	95.842	ENSOARG00000010589	SMARCA5	93	95.842	Ovis_aries
ENSLACG00000007091	SMARCA5	97	95.257	ENSPPAG00000028523	SMARCA5	99	95.257	Pan_paniscus
ENSLACG00000007091	SMARCA5	97	90.010	ENSPPRG00000004925	SMARCA5	94	90.918	Panthera_pardus
ENSLACG00000007091	SMARCA5	97	95.661	ENSPTIG00000020959	SMARCA5	95	95.661	Panthera_tigris_altaica
ENSLACG00000007091	SMARCA5	97	95.358	ENSPTRG00000016472	SMARCA5	99	95.358	Pan_troglodytes
ENSLACG00000007091	SMARCA5	97	95.358	ENSPANG00000001175	SMARCA5	94	95.358	Papio_anubis
ENSLACG00000007091	SMARCA5	98	90.222	ENSPKIG00000015699	SMARCA5	98	90.307	Paramormyrops_kingsleyae
ENSLACG00000007091	SMARCA5	99	88.299	ENSPKIG00000015885	SMARCA5	100	91.134	Paramormyrops_kingsleyae
ENSLACG00000007091	SMARCA5	98	93.353	ENSPSIG00000004177	SMARCA5	99	93.353	Pelodiscus_sinensis
ENSLACG00000007091	SMARCA5	95	90.329	ENSPMGG00000012316	SMARCA5	100	90.329	Periophthalmus_magnuspinnatus
ENSLACG00000007091	SMARCA5	98	95.000	ENSPEMG00000008060	Smarca5	98	95.000	Peromyscus_maniculatus_bairdii
ENSLACG00000007091	SMARCA5	97	70.512	ENSPMAG00000006011	SMARCA5	81	85.304	Petromyzon_marinus
ENSLACG00000007091	SMARCA5	63	86.427	ENSPMAG00000008026	SMARCA5	99	86.427	Petromyzon_marinus
ENSLACG00000007091	SMARCA5	97	95.863	ENSPCIG00000003926	SMARCA5	94	95.863	Phascolarctos_cinereus
ENSLACG00000007091	SMARCA5	97	95.358	ENSPPYG00000015091	SMARCA5	94	95.358	Pongo_abelii
ENSLACG00000007091	SMARCA5	82	92.167	ENSPCAG00000014230	SMARCA5	83	92.167	Procavia_capensis
ENSLACG00000007091	SMARCA5	97	92.634	ENSPCOG00000026744	SMARCA5	99	92.145	Propithecus_coquereli
ENSLACG00000007091	SMARCA5	97	95.560	ENSPVAG00000006482	SMARCA5	94	95.560	Pteropus_vampyrus
ENSLACG00000007091	SMARCA5	99	89.321	ENSPNAG00000027824	SMARCA5	96	91.763	Pygocentrus_nattereri
ENSLACG00000007091	SMARCA5	97	95.358	ENSRNOG00000018149	Smarca5	99	95.181	Rattus_norvegicus
ENSLACG00000007091	SMARCA5	98	94.905	ENSRBIG00000044644	SMARCA5	95	94.905	Rhinopithecus_bieti
ENSLACG00000007091	SMARCA5	98	94.995	ENSRROG00000029591	SMARCA5	99	94.995	Rhinopithecus_roxellana
ENSLACG00000007091	SMARCA5	97	95.459	ENSSBOG00000036257	SMARCA5	94	95.459	Saimiri_boliviensis_boliviensis
ENSLACG00000007091	SMARCA5	97	95.863	ENSSHAG00000008464	SMARCA5	99	95.863	Sarcophilus_harrisii
ENSLACG00000007091	SMARCA5	99	89.401	ENSSFOG00015013252	SMARCA5	97	91.073	Scleropages_formosus
ENSLACG00000007091	SMARCA5	97	93.939	ENSSPUG00000007604	SMARCA5	99	93.939	Sphenodon_punctatus
ENSLACG00000007091	SMARCA5	97	95.661	ENSSSCG00000009047	SMARCA5	94	95.661	Sus_scrofa
ENSLACG00000007091	SMARCA5	97	96.041	ENSTGUG00000002408	SMARCA5	98	96.041	Taeniopygia_guttata
ENSLACG00000007091	SMARCA5	95	96.182	ENSUAMG00000023495	SMARCA5	93	96.182	Ursus_americanus
ENSLACG00000007091	SMARCA5	97	95.661	ENSUMAG00000015324	SMARCA5	96	95.661	Ursus_maritimus
ENSLACG00000007091	SMARCA5	97	95.560	ENSVPAG00000008982	SMARCA5	94	95.560	Vicugna_pacos
ENSLACG00000007091	SMARCA5	97	95.661	ENSVVUG00000017473	SMARCA5	94	95.661	Vulpes_vulpes
ENSLACG00000007091	SMARCA5	92	94.004	ENSXETG00000017566	smarca5	94	94.004	Xenopus_tropicalis