EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000007100 (Gene tree)
Gene ID: 102366119
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 41852 bases
Position: chrJH127924.1:255304-297155
Accession: 102366119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008022	RNase_H	PF00075.24	6.6e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008088	RNASEH1-201	2291	XM_006006542	ENSLACP00000008022	310 (aa)	XP_006006604	H3AEF1

Gene Model

Click here to download ENSLACG00000007100's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007100's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007100	RNASEH1	90	54.286	ENSG00000171865	RNASEH1	92	53.357	Homo_sapiens
ENSLACG00000007100	RNASEH1	90	56.071	ENSAPOG00000000412	rnaseh1	90	55.197	Acanthochromis_polyacanthus
ENSLACG00000007100	RNASEH1	90	55.197	ENSAMEG00000018433	RNASEH1	97	52.365	Ailuropoda_melanoleuca
ENSLACG00000007100	RNASEH1	90	57.500	ENSACIG00000014666	rnaseh1	89	56.272	Amphilophus_citrinellus
ENSLACG00000007100	RNASEH1	90	56.429	ENSAOCG00000015210	rnaseh1	90	55.914	Amphiprion_ocellaris
ENSLACG00000007100	RNASEH1	90	56.786	ENSAPEG00000014104	rnaseh1	90	56.272	Amphiprion_percula
ENSLACG00000007100	RNASEH1	90	58.571	ENSATEG00000000598	rnaseh1	96	57.857	Anabas_testudineus
ENSLACG00000007100	RNASEH1	85	54.074	ENSAPLG00000001961	RNASEH1	100	55.094	Anas_platyrhynchos
ENSLACG00000007100	RNASEH1	96	48.910	ENSACAG00000016857	rnaseh1	98	48.607	Anolis_carolinensis
ENSLACG00000007100	RNASEH1	90	55.357	ENSANAG00000024055	RNASEH1	92	54.196	Aotus_nancymaae
ENSLACG00000007100	RNASEH1	90	55.357	ENSACLG00000006741	rnaseh1	89	55.714	Astatotilapia_calliptera
ENSLACG00000007100	RNASEH1	95	49.662	ENSAMXG00000042940	rnaseh1	99	53.004	Astyanax_mexicanus
ENSLACG00000007100	RNASEH1	87	55.515	ENSBTAG00000016235	RNASEH1	91	54.545	Bos_taurus
ENSLACG00000007100	RNASEH1	87	39.194	WBGene00004382	rnh-1.0	95	38.828	Caenorhabditis_elegans
ENSLACG00000007100	RNASEH1	91	53.608	ENSCJAG00000035450	RNASEH1	93	53.608	Callithrix_jacchus
ENSLACG00000007100	RNASEH1	96	53.356	ENSCAFG00000003259	RNASEH1	98	52.189	Canis_familiaris
ENSLACG00000007100	RNASEH1	81	42.629	ENSCHIG00000022230	-	98	42.629	Capra_hircus
ENSLACG00000007100	RNASEH1	94	53.265	ENSCHIG00000022264	-	95	51.712	Capra_hircus
ENSLACG00000007100	RNASEH1	89	55.235	ENSTSYG00000012926	RNASEH1	89	54.874	Carlito_syrichta
ENSLACG00000007100	RNASEH1	83	55.039	ENSCAPG00000004813	RNASEH1	99	54.264	Cavia_aperea
ENSLACG00000007100	RNASEH1	89	55.596	ENSCPOG00000022278	Rnaseh1	88	54.874	Cavia_porcellus
ENSLACG00000007100	RNASEH1	91	53.310	ENSCCAG00000038017	RNASEH1	93	53.310	Cebus_capucinus
ENSLACG00000007100	RNASEH1	90	54.577	ENSCATG00000016515	-	92	53.873	Cercocebus_atys
ENSLACG00000007100	RNASEH1	90	47.857	ENSCATG00000016818	-	92	47.857	Cercocebus_atys
ENSLACG00000007100	RNASEH1	89	57.401	ENSCLAG00000002440	RNASEH1	91	56.318	Chinchilla_lanigera
ENSLACG00000007100	RNASEH1	91	53.265	ENSCSAG00000006943	RNASEH1	98	50.974	Chlorocebus_sabaeus
ENSLACG00000007100	RNASEH1	57	60.513	ENSCHOG00000008547	RNASEH1	75	72.549	Choloepus_hoffmanni
ENSLACG00000007100	RNASEH1	89	61.011	ENSCPBG00000021620	RNASEH1	99	61.538	Chrysemys_picta_bellii
ENSLACG00000007100	RNASEH1	89	39.175	ENSCING00000014054	-	93	38.144	Ciona_intestinalis
ENSLACG00000007100	RNASEH1	75	36.694	ENSCSAVG00000000009	-	96	37.917	Ciona_savignyi
ENSLACG00000007100	RNASEH1	90	53.608	ENSCANG00000037763	RNASEH1	92	52.613	Colobus_angolensis_palliatus
ENSLACG00000007100	RNASEH1	90	55.396	ENSCGRG00001008950	Rnaseh1	91	55.396	Cricetulus_griseus_chok1gshd
ENSLACG00000007100	RNASEH1	90	55.396	ENSCGRG00000006029	Rnaseh1	91	55.396	Cricetulus_griseus_crigri
ENSLACG00000007100	RNASEH1	90	51.071	ENSCSEG00000005741	rnaseh1	95	51.246	Cynoglossus_semilaevis
ENSLACG00000007100	RNASEH1	92	55.439	ENSCVAG00000018717	rnaseh1	91	55.088	Cyprinodon_variegatus
ENSLACG00000007100	RNASEH1	90	57.706	ENSDARG00000042571	rnaseh1	98	57.348	Danio_rerio
ENSLACG00000007100	RNASEH1	95	53.378	ENSDNOG00000016056	RNASEH1	97	53.041	Dasypus_novemcinctus
ENSLACG00000007100	RNASEH1	89	55.036	ENSDORG00000000704	Rnaseh1	90	54.545	Dipodomys_ordii
ENSLACG00000007100	RNASEH1	88	36.897	FBgn0023171	rnh1	92	37.415	Drosophila_melanogaster
ENSLACG00000007100	RNASEH1	95	49.333	ENSETEG00000012674	RNASEH1	97	49.329	Echinops_telfairi
ENSLACG00000007100	RNASEH1	88	44.637	ENSEBUG00000008898	rnaseh1	98	44.518	Eptatretus_burgeri
ENSLACG00000007100	RNASEH1	88	44.727	ENSEBUG00000006116	rnaseh1	78	45.221	Eptatretus_burgeri
ENSLACG00000007100	RNASEH1	90	54.122	ENSEASG00005022200	RNASEH1	90	51.930	Equus_asinus_asinus
ENSLACG00000007100	RNASEH1	90	54.122	ENSECAG00000020695	RNASEH1	90	51.930	Equus_caballus
ENSLACG00000007100	RNASEH1	95	54.392	ENSELUG00000010112	rnaseh1	95	53.378	Esox_lucius
ENSLACG00000007100	RNASEH1	95	52.862	ENSFCAG00000025832	RNASEH1	97	50.667	Felis_catus
ENSLACG00000007100	RNASEH1	94	53.559	ENSFALG00000002069	RNASEH1	98	53.584	Ficedula_albicollis
ENSLACG00000007100	RNASEH1	89	55.319	ENSFDAG00000002035	RNASEH1	80	53.237	Fukomys_damarensis
ENSLACG00000007100	RNASEH1	89	56.522	ENSGMOG00000013818	rnaseh1	90	54.710	Gadus_morhua
ENSLACG00000007100	RNASEH1	95	56.271	ENSGALG00000016389	RNASEH1	99	56.271	Gallus_gallus
ENSLACG00000007100	RNASEH1	90	56.071	ENSGAFG00000001776	rnaseh1	92	56.071	Gambusia_affinis
ENSLACG00000007100	RNASEH1	90	55.357	ENSGACG00000011935	rnaseh1	91	54.839	Gasterosteus_aculeatus
ENSLACG00000007100	RNASEH1	90	60.000	ENSGAGG00000009150	RNASEH1	62	60.289	Gopherus_agassizii
ENSLACG00000007100	RNASEH1	90	54.286	ENSGGOG00000034822	RNASEH1	92	53.357	Gorilla_gorilla
ENSLACG00000007100	RNASEH1	90	55.357	ENSHBUG00000004666	rnaseh1	89	55.000	Haplochromis_burtoni
ENSLACG00000007100	RNASEH1	90	54.448	ENSHGLG00000002585	Rnaseh1	84	53.737	Heterocephalus_glaber_female
ENSLACG00000007100	RNASEH1	90	54.448	ENSHGLG00100005105	Rnaseh1	84	53.737	Heterocephalus_glaber_male
ENSLACG00000007100	RNASEH1	91	56.491	ENSHCOG00000012329	rnaseh1	91	56.842	Hippocampus_comes
ENSLACG00000007100	RNASEH1	91	54.093	ENSIPUG00000023060	rnaseh1	99	54.093	Ictalurus_punctatus
ENSLACG00000007100	RNASEH1	89	55.636	ENSSTOG00000012774	RNASEH1	93	54.839	Ictidomys_tridecemlineatus
ENSLACG00000007100	RNASEH1	81	52.941	ENSJJAG00000020238	Rnaseh1	92	51.181	Jaculus_jaculus
ENSLACG00000007100	RNASEH1	87	44.689	ENSJJAG00000008994	-	90	43.173	Jaculus_jaculus
ENSLACG00000007100	RNASEH1	90	50.709	ENSJJAG00000021481	-	92	49.291	Jaculus_jaculus
ENSLACG00000007100	RNASEH1	90	55.000	ENSKMAG00000001373	rnaseh1	90	53.405	Kryptolebias_marmoratus
ENSLACG00000007100	RNASEH1	90	54.122	ENSLBEG00000004480	rnaseh1	97	54.122	Labrus_bergylta
ENSLACG00000007100	RNASEH1	90	59.717	ENSLOCG00000017212	rnaseh1	99	59.075	Lepisosteus_oculatus
ENSLACG00000007100	RNASEH1	95	53.488	ENSLAFG00000015091	RNASEH1	97	52.365	Loxodonta_africana
ENSLACG00000007100	RNASEH1	90	50.896	ENSMFAG00000002323	-	91	49.462	Macaca_fascicularis
ENSLACG00000007100	RNASEH1	90	54.225	ENSMFAG00000000063	-	92	52.448	Macaca_fascicularis
ENSLACG00000007100	RNASEH1	90	51.254	ENSMMUG00000019280	-	91	49.462	Macaca_mulatta
ENSLACG00000007100	RNASEH1	90	50.896	ENSMNEG00000029676	-	91	49.462	Macaca_nemestrina
ENSLACG00000007100	RNASEH1	90	54.225	ENSMNEG00000040183	-	92	52.448	Macaca_nemestrina
ENSLACG00000007100	RNASEH1	90	52.330	ENSMLEG00000028662	-	91	50.896	Mandrillus_leucophaeus
ENSLACG00000007100	RNASEH1	83	54.580	ENSMLEG00000039352	-	99	53.817	Mandrillus_leucophaeus
ENSLACG00000007100	RNASEH1	95	55.782	ENSMAMG00000019725	rnaseh1	95	56.272	Mastacembelus_armatus
ENSLACG00000007100	RNASEH1	90	55.357	ENSMZEG00005013006	rnaseh1	89	55.714	Maylandia_zebra
ENSLACG00000007100	RNASEH1	80	57.028	ENSMGAG00000013979	RNASEH1	100	57.028	Meleagris_gallopavo
ENSLACG00000007100	RNASEH1	90	55.556	ENSMAUG00000014957	Rnaseh1	92	55.556	Mesocricetus_auratus
ENSLACG00000007100	RNASEH1	90	55.914	ENSMICG00000033156	RNASEH1	91	54.643	Microcebus_murinus
ENSLACG00000007100	RNASEH1	90	54.386	ENSMOCG00000015522	Rnaseh1	92	52.482	Microtus_ochrogaster
ENSLACG00000007100	RNASEH1	91	53.546	ENSMMOG00000015902	rnaseh1	90	53.191	Mola_mola
ENSLACG00000007100	RNASEH1	89	56.631	ENSMODG00000014491	-	90	55.596	Monodelphis_domestica
ENSLACG00000007100	RNASEH1	52	65.432	ENSMODG00000028814	-	62	67.763	Monodelphis_domestica
ENSLACG00000007100	RNASEH1	90	56.429	ENSMALG00000010565	rnaseh1	75	70.748	Monopterus_albus
ENSLACG00000007100	RNASEH1	97	53.667	MGP_CAROLIEiJ_G0017660	Rnaseh1	99	53.000	Mus_caroli
ENSLACG00000007100	RNASEH1	97	54.000	ENSMUSG00000020630	Rnaseh1	99	52.667	Mus_musculus
ENSLACG00000007100	RNASEH1	97	54.000	MGP_PahariEiJ_G0029418	Rnaseh1	99	52.667	Mus_pahari
ENSLACG00000007100	RNASEH1	97	53.667	MGP_SPRETEiJ_G0018502	Rnaseh1	99	53.333	Mus_spretus
ENSLACG00000007100	RNASEH1	54	65.476	ENSMPUG00000012984	RNASEH1	74	69.935	Mustela_putorius_furo
ENSLACG00000007100	RNASEH1	91	53.659	ENSNGAG00000015966	Rnaseh1	87	51.773	Nannospalax_galili
ENSLACG00000007100	RNASEH1	90	55.714	ENSNBRG00000008739	rnaseh1	89	55.714	Neolamprologus_brichardi
ENSLACG00000007100	RNASEH1	90	47.222	ENSNLEG00000015400	RNASEH1	91	46.181	Nomascus_leucogenys
ENSLACG00000007100	RNASEH1	88	48.214	ENSNLEG00000000059	-	98	47.500	Nomascus_leucogenys
ENSLACG00000007100	RNASEH1	94	37.667	ENSMEUG00000003610	-	99	36.877	Notamacropus_eugenii
ENSLACG00000007100	RNASEH1	95	51.689	ENSOPRG00000005072	RNASEH1	97	50.987	Ochotona_princeps
ENSLACG00000007100	RNASEH1	89	57.401	ENSODEG00000000235	Rnaseh1	88	55.396	Octodon_degus
ENSLACG00000007100	RNASEH1	90	57.295	ENSONIG00000018697	rnaseh1	99	55.000	Oreochromis_niloticus
ENSLACG00000007100	RNASEH1	90	53.929	ENSOCUG00000006117	RNASEH1	92	53.571	Oryctolagus_cuniculus
ENSLACG00000007100	RNASEH1	90	56.989	ENSORLG00000018127	rnaseh1	96	56.272	Oryzias_latipes
ENSLACG00000007100	RNASEH1	90	56.989	ENSORLG00020013660	rnaseh1	89	56.272	Oryzias_latipes_hni
ENSLACG00000007100	RNASEH1	90	57.348	ENSORLG00015011338	rnaseh1	89	56.631	Oryzias_latipes_hsok
ENSLACG00000007100	RNASEH1	82	54.902	ENSOMEG00000004710	rnaseh1	92	54.510	Oryzias_melastigma
ENSLACG00000007100	RNASEH1	89	54.930	ENSOGAG00000017176	RNASEH1	91	53.623	Otolemur_garnettii
ENSLACG00000007100	RNASEH1	94	47.541	ENSOARG00000005386	RNASEH1	96	46.711	Ovis_aries
ENSLACG00000007100	RNASEH1	90	54.286	ENSPPAG00000034221	RNASEH1	92	53.357	Pan_paniscus
ENSLACG00000007100	RNASEH1	95	52.525	ENSPPRG00000015513	RNASEH1	97	50.333	Panthera_pardus
ENSLACG00000007100	RNASEH1	83	54.440	ENSPTIG00000019034	RNASEH1	84	51.908	Panthera_tigris_altaica
ENSLACG00000007100	RNASEH1	83	46.792	ENSPTRG00000043403	-	92	45.693	Pan_troglodytes
ENSLACG00000007100	RNASEH1	90	54.286	ENSPTRG00000011614	RNASEH1	92	53.357	Pan_troglodytes
ENSLACG00000007100	RNASEH1	90	53.571	ENSPANG00000000443	RNASEH1	99	52.632	Papio_anubis
ENSLACG00000007100	RNASEH1	90	49.643	ENSPANG00000018246	-	91	48.571	Papio_anubis
ENSLACG00000007100	RNASEH1	88	57.246	ENSPKIG00000003146	rnaseh1	97	58.909	Paramormyrops_kingsleyae
ENSLACG00000007100	RNASEH1	88	60.364	ENSPSIG00000002937	RNASEH1	99	60.364	Pelodiscus_sinensis
ENSLACG00000007100	RNASEH1	94	50.859	ENSPMGG00000017463	rnaseh1	95	50.515	Periophthalmus_magnuspinnatus
ENSLACG00000007100	RNASEH1	90	54.225	ENSPEMG00000022465	-	92	54.225	Peromyscus_maniculatus_bairdii
ENSLACG00000007100	RNASEH1	94	51.667	ENSPCIG00000023334	-	98	51.333	Phascolarctos_cinereus
ENSLACG00000007100	RNASEH1	60	37.433	ENSPCIG00000026047	-	85	40.397	Phascolarctos_cinereus
ENSLACG00000007100	RNASEH1	92	55.789	ENSPFOG00000002841	rnaseh1	93	55.789	Poecilia_formosa
ENSLACG00000007100	RNASEH1	66	46.569	ENSPLAG00000021349	-	78	45.540	Poecilia_latipinna
ENSLACG00000007100	RNASEH1	89	56.522	ENSPMEG00000016826	rnaseh1	93	55.789	Poecilia_mexicana
ENSLACG00000007100	RNASEH1	89	55.830	ENSPREG00000012197	rnaseh1	91	54.255	Poecilia_reticulata
ENSLACG00000007100	RNASEH1	90	45.105	ENSPPYG00000025873	RNASEH1	65	68.103	Pongo_abelii
ENSLACG00000007100	RNASEH1	83	49.242	ENSPPYG00000008067	-	92	48.106	Pongo_abelii
ENSLACG00000007100	RNASEH1	89	52.688	ENSPCAG00000002500	RNASEH1	90	53.069	Procavia_capensis
ENSLACG00000007100	RNASEH1	90	49.462	ENSPCOG00000019444	RNASEH1	91	49.462	Propithecus_coquereli
ENSLACG00000007100	RNASEH1	89	50.542	ENSPVAG00000002070	RNASEH1	91	50.177	Pteropus_vampyrus
ENSLACG00000007100	RNASEH1	90	55.000	ENSPNYG00000001292	rnaseh1	89	55.357	Pundamilia_nyererei
ENSLACG00000007100	RNASEH1	95	56.146	ENSPNAG00000022344	rnaseh1	96	55.184	Pygocentrus_nattereri
ENSLACG00000007100	RNASEH1	90	55.124	ENSRNOG00000008584	Rnaseh1	92	55.556	Rattus_norvegicus
ENSLACG00000007100	RNASEH1	90	53.310	ENSRBIG00000034222	RNASEH1	91	52.265	Rhinopithecus_bieti
ENSLACG00000007100	RNASEH1	90	53.659	ENSRROG00000041761	RNASEH1	91	52.613	Rhinopithecus_roxellana
ENSLACG00000007100	RNASEH1	64	57.447	YMR234W	-	61	57.447	Saccharomyces_cerevisiae
ENSLACG00000007100	RNASEH1	91	53.633	ENSSBOG00000025411	RNASEH1	93	53.310	Saimiri_boliviensis_boliviensis
ENSLACG00000007100	RNASEH1	91	55.477	ENSSHAG00000013051	RNASEH1	91	54.770	Sarcophilus_harrisii
ENSLACG00000007100	RNASEH1	90	55.000	ENSSFOG00015002709	rnaseh1	92	54.643	Scleropages_formosus
ENSLACG00000007100	RNASEH1	90	56.786	ENSSMAG00000007586	rnaseh1	89	56.786	Scophthalmus_maximus
ENSLACG00000007100	RNASEH1	90	54.839	ENSSDUG00000008217	rnaseh1	95	53.237	Seriola_dumerili
ENSLACG00000007100	RNASEH1	86	52.688	ENSSLDG00000000442	rnaseh1	94	52.809	Seriola_lalandi_dorsalis
ENSLACG00000007100	RNASEH1	95	56.803	ENSSPUG00000006644	RNASEH1	98	56.803	Sphenodon_punctatus
ENSLACG00000007100	RNASEH1	90	57.348	ENSSPAG00000009353	rnaseh1	89	56.989	Stegastes_partitus
ENSLACG00000007100	RNASEH1	87	52.364	ENSSSCG00000025305	RNASEH1	89	52.364	Sus_scrofa
ENSLACG00000007100	RNASEH1	90	54.286	ENSTGUG00000012980	RNASEH1	94	53.873	Taeniopygia_guttata
ENSLACG00000007100	RNASEH1	91	54.965	ENSTRUG00000015774	rnaseh1	98	53.025	Takifugu_rubripes
ENSLACG00000007100	RNASEH1	91	56.184	ENSTNIG00000010715	rnaseh1	98	54.610	Tetraodon_nigroviridis
ENSLACG00000007100	RNASEH1	90	49.643	ENSTTRG00000001615	RNASEH1	92	48.780	Tursiops_truncatus
ENSLACG00000007100	RNASEH1	63	59.487	ENSUAMG00000018254	RNASEH1	79	69.935	Ursus_americanus
ENSLACG00000007100	RNASEH1	69	54.419	ENSUMAG00000003941	RNASEH1	65	52.582	Ursus_maritimus
ENSLACG00000007100	RNASEH1	94	43.771	ENSVPAG00000011589	RNASEH1	96	44.068	Vicugna_pacos
ENSLACG00000007100	RNASEH1	96	52.862	ENSVVUG00000008633	RNASEH1	87	52.525	Vulpes_vulpes
ENSLACG00000007100	RNASEH1	79	46.970	ENSXETG00000030371	-	97	57.447	Xenopus_tropicalis
ENSLACG00000007100	RNASEH1	88	53.763	ENSXETG00000001212	rnaseh1	95	62.791	Xenopus_tropicalis
ENSLACG00000007100	RNASEH1	90	56.071	ENSXMAG00000002357	rnaseh1	92	54.839	Xiphophorus_maculatus