EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000007112 (Gene tree)
Gene ID: 102353249
Gene Symbol: RNPS1
Alias: -
Full Name: RNA-binding protein with serine-rich domain 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 41469 bases
Position: chrJH128221.1:256469-297937
Accession: 102353249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008037	RRM_1	PF00076.22	1.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008103	RNPS1-201	1017	XM_006007945	ENSLACP00000008037	284 (aa)	XP_006008007	H3AEG6

Gene Model

Click here to download ENSLACG00000007112's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03013	RNA transport	KEGG
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007112	RNPS1	85	87.917	ENSG00000205937	RNPS1	85	87.917	Homo_sapiens
ENSLACG00000007112	RNPS1	84	87.866	ENSAMEG00000017861	RNPS1	78	87.866	Ailuropoda_melanoleuca
ENSLACG00000007112	RNPS1	74	84.211	ENSACAG00000004088	RNPS1	84	84.211	Anolis_carolinensis
ENSLACG00000007112	RNPS1	80	82.379	ENSANAG00000029802	-	83	85.581	Aotus_nancymaae
ENSLACG00000007112	RNPS1	85	87.500	ENSANAG00000028802	RNPS1	85	87.500	Aotus_nancymaae
ENSLACG00000007112	RNPS1	76	88.018	ENSBTAG00000009969	RNPS1	77	88.018	Bos_taurus
ENSLACG00000007112	RNPS1	85	87.917	ENSCJAG00000014969	RNPS1	90	84.579	Callithrix_jacchus
ENSLACG00000007112	RNPS1	84	87.866	ENSCAFG00000019397	RNPS1	78	87.866	Canis_familiaris
ENSLACG00000007112	RNPS1	84	87.866	ENSCAFG00020026159	RNPS1	86	87.065	Canis_lupus_dingo
ENSLACG00000007112	RNPS1	72	86.765	ENSCHIG00000014621	-	69	87.192	Capra_hircus
ENSLACG00000007112	RNPS1	76	83.871	ENSTSYG00000031848	-	88	83.796	Carlito_syrichta
ENSLACG00000007112	RNPS1	85	87.917	ENSTSYG00000001629	RNPS1	85	87.917	Carlito_syrichta
ENSLACG00000007112	RNPS1	84	87.866	ENSCAPG00000007731	RNPS1	78	87.866	Cavia_aperea
ENSLACG00000007112	RNPS1	85	87.917	ENSCPOG00000002066	RNPS1	85	87.917	Cavia_porcellus
ENSLACG00000007112	RNPS1	85	87.500	ENSCCAG00000034480	RNPS1	85	87.500	Cebus_capucinus
ENSLACG00000007112	RNPS1	93	80.303	ENSCATG00000042361	-	80	82.845	Cercocebus_atys
ENSLACG00000007112	RNPS1	85	87.917	ENSCATG00000013756	RNPS1	85	87.917	Cercocebus_atys
ENSLACG00000007112	RNPS1	85	87.917	ENSCLAG00000015546	RNPS1	85	87.917	Chinchilla_lanigera
ENSLACG00000007112	RNPS1	97	85.818	ENSCSAG00000005219	-	81	86.667	Chlorocebus_sabaeus
ENSLACG00000007112	RNPS1	84	87.448	ENSCHOG00000004866	RNPS1	78	87.448	Choloepus_hoffmanni
ENSLACG00000007112	RNPS1	85	87.917	ENSCANG00000041307	RNPS1	85	87.917	Colobus_angolensis_palliatus
ENSLACG00000007112	RNPS1	85	87.917	ENSCGRG00001020431	Rnps1	85	87.917	Cricetulus_griseus_chok1gshd
ENSLACG00000007112	RNPS1	77	88.073	ENSCGRG00000014021	Rnps1	77	88.018	Cricetulus_griseus_crigri
ENSLACG00000007112	RNPS1	84	87.866	ENSDNOG00000016081	RNPS1	78	87.866	Dasypus_novemcinctus
ENSLACG00000007112	RNPS1	69	63.265	ENSDNOG00000038751	-	98	62.944	Dasypus_novemcinctus
ENSLACG00000007112	RNPS1	85	87.083	ENSDORG00000001755	Rnps1	85	87.083	Dipodomys_ordii
ENSLACG00000007112	RNPS1	84	87.866	ENSEASG00005004862	RNPS1	78	87.866	Equus_asinus_asinus
ENSLACG00000007112	RNPS1	77	82.648	ENSECAG00000023288	RNPS1	75	85.507	Equus_caballus
ENSLACG00000007112	RNPS1	85	87.500	ENSFCAG00000007690	RNPS1	85	87.500	Felis_catus
ENSLACG00000007112	RNPS1	84	89.540	ENSFALG00000004868	RNPS1	84	89.540	Ficedula_albicollis
ENSLACG00000007112	RNPS1	85	87.917	ENSFDAG00000003386	RNPS1	85	87.917	Fukomys_damarensis
ENSLACG00000007112	RNPS1	85	89.583	ENSGALG00000009288	RNPS1	85	89.583	Gallus_gallus
ENSLACG00000007112	RNPS1	83	69.492	ENSGACG00000011261	RNPS1	83	68.085	Gasterosteus_aculeatus
ENSLACG00000007112	RNPS1	84	89.121	ENSGAGG00000010452	RNPS1	78	89.121	Gopherus_agassizii
ENSLACG00000007112	RNPS1	73	85.507	ENSGGOG00000026421	-	79	85.507	Gorilla_gorilla
ENSLACG00000007112	RNPS1	85	87.917	ENSGGOG00000014275	RNPS1	85	87.917	Gorilla_gorilla
ENSLACG00000007112	RNPS1	85	87.917	ENSHGLG00000013957	RNPS1	85	87.917	Heterocephalus_glaber_female
ENSLACG00000007112	RNPS1	79	84.821	ENSHGLG00000006292	-	88	86.636	Heterocephalus_glaber_female
ENSLACG00000007112	RNPS1	85	87.917	ENSHGLG00100003539	RNPS1	85	87.917	Heterocephalus_glaber_male
ENSLACG00000007112	RNPS1	85	87.500	ENSJJAG00000015576	-	85	87.500	Jaculus_jaculus
ENSLACG00000007112	RNPS1	68	69.948	ENSLBEG00000024091	RNPS1	75	67.442	Labrus_bergylta
ENSLACG00000007112	RNPS1	85	87.917	ENSMFAG00000042142	RNPS1	85	87.917	Macaca_fascicularis
ENSLACG00000007112	RNPS1	71	87.192	ENSMMUG00000019238	-	79	87.192	Macaca_mulatta
ENSLACG00000007112	RNPS1	86	83.197	ENSMMUG00000041726	-	84	82.845	Macaca_mulatta
ENSLACG00000007112	RNPS1	86	83.607	ENSMNEG00000024827	-	84	83.264	Macaca_nemestrina
ENSLACG00000007112	RNPS1	73	81.643	ENSMLEG00000040232	-	81	81.643	Mandrillus_leucophaeus
ENSLACG00000007112	RNPS1	85	87.917	ENSMLEG00000036928	RNPS1	85	87.917	Mandrillus_leucophaeus
ENSLACG00000007112	RNPS1	77	89.498	ENSMGAG00000010042	RNPS1	89	89.352	Meleagris_gallopavo
ENSLACG00000007112	RNPS1	85	88.333	ENSMICG00000031543	RNPS1	85	88.333	Microcebus_murinus
ENSLACG00000007112	RNPS1	85	87.917	ENSMOCG00000003429	Rnps1	85	87.917	Microtus_ochrogaster
ENSLACG00000007112	RNPS1	76	70.233	ENSMMOG00000010863	RNPS1	75	68.837	Mola_mola
ENSLACG00000007112	RNPS1	85	87.917	ENSMUSG00000034681	Rnps1	85	87.917	Mus_musculus
ENSLACG00000007112	RNPS1	85	87.917	MGP_PahariEiJ_G0023498	Rnps1	85	87.917	Mus_pahari
ENSLACG00000007112	RNPS1	85	87.917	MGP_SPRETEiJ_G0022092	Rnps1	85	87.917	Mus_spretus
ENSLACG00000007112	RNPS1	84	87.866	ENSMLUG00000016808	RNPS1	78	87.866	Myotis_lucifugus
ENSLACG00000007112	RNPS1	85	87.917	ENSNGAG00000023702	Rnps1	85	87.917	Nannospalax_galili
ENSLACG00000007112	RNPS1	76	67.442	ENSNBRG00000023437	RNPS1	75	64.186	Neolamprologus_brichardi
ENSLACG00000007112	RNPS1	88	85.944	ENSNLEG00000009243	RNPS1	87	87.558	Nomascus_leucogenys
ENSLACG00000007112	RNPS1	84	87.448	ENSMEUG00000008882	RNPS1	78	87.448	Notamacropus_eugenii
ENSLACG00000007112	RNPS1	84	87.866	ENSOPRG00000016422	RNPS1	78	87.866	Ochotona_princeps
ENSLACG00000007112	RNPS1	84	87.866	ENSOARG00000018056	-	67	87.866	Ovis_aries
ENSLACG00000007112	RNPS1	72	86.765	ENSPPAG00000037836	-	86	86.765	Pan_paniscus
ENSLACG00000007112	RNPS1	87	83.401	ENSPPAG00000011845	RNPS1	86	83.333	Pan_paniscus
ENSLACG00000007112	RNPS1	85	87.500	ENSPPRG00000011255	RNPS1	85	87.500	Panthera_pardus
ENSLACG00000007112	RNPS1	55	78.846	ENSPTIG00000015643	RNPS1	62	92.308	Panthera_tigris_altaica
ENSLACG00000007112	RNPS1	85	87.917	ENSPTRG00000031310	RNPS1	85	87.917	Pan_troglodytes
ENSLACG00000007112	RNPS1	73	85.990	ENSPTRG00000046326	-	81	85.990	Pan_troglodytes
ENSLACG00000007112	RNPS1	85	87.917	ENSPANG00000015748	RNPS1	85	87.917	Papio_anubis
ENSLACG00000007112	RNPS1	84	89.121	ENSPSIG00000006048	RNPS1	78	89.121	Pelodiscus_sinensis
ENSLACG00000007112	RNPS1	65	72.043	ENSPMGG00000015888	-	75	66.047	Periophthalmus_magnuspinnatus
ENSLACG00000007112	RNPS1	85	87.917	ENSPEMG00000012797	Rnps1	85	87.917	Peromyscus_maniculatus_bairdii
ENSLACG00000007112	RNPS1	85	87.500	ENSPCIG00000025012	RNPS1	85	87.500	Phascolarctos_cinereus
ENSLACG00000007112	RNPS1	53	82.119	ENSPCIG00000016114	-	57	90.598	Phascolarctos_cinereus
ENSLACG00000007112	RNPS1	84	85.356	ENSPCAG00000004514	RNPS1	78	85.356	Procavia_capensis
ENSLACG00000007112	RNPS1	85	88.333	ENSPCOG00000005478	RNPS1	85	88.333	Propithecus_coquereli
ENSLACG00000007112	RNPS1	84	88.285	ENSPVAG00000005105	RNPS1	78	88.285	Pteropus_vampyrus
ENSLACG00000007112	RNPS1	84	87.866	ENSRNOG00000008703	Rnps1	78	87.866	Rattus_norvegicus
ENSLACG00000007112	RNPS1	85	87.917	ENSRBIG00000038965	-	88	87.866	Rhinopithecus_bieti
ENSLACG00000007112	RNPS1	85	87.917	ENSRROG00000041252	RNPS1	85	87.917	Rhinopithecus_roxellana
ENSLACG00000007112	RNPS1	85	87.917	ENSSBOG00000027927	RNPS1	85	87.917	Saimiri_boliviensis_boliviensis
ENSLACG00000007112	RNPS1	84	87.448	ENSSHAG00000016951	RNPS1	78	87.448	Sarcophilus_harrisii
ENSLACG00000007112	RNPS1	83	76.271	ENSSFOG00015022746	RNPS1	85	70.213	Scleropages_formosus
ENSLACG00000007112	RNPS1	76	85.648	ENSSARG00000001577	RNPS1	77	85.648	Sorex_araneus
ENSLACG00000007112	RNPS1	84	88.703	ENSSPUG00000016588	RNPS1	78	88.703	Sphenodon_punctatus
ENSLACG00000007112	RNPS1	84	88.285	ENSSSCG00000008048	RNPS1	78	88.285	Sus_scrofa
ENSLACG00000007112	RNPS1	84	89.540	ENSTGUG00000003237	RNPS1	84	89.540	Taeniopygia_guttata
ENSLACG00000007112	RNPS1	87	87.903	ENSTBEG00000009098	RNPS1	88	87.866	Tupaia_belangeri
ENSLACG00000007112	RNPS1	84	87.866	ENSTTRG00000008220	RNPS1	78	87.866	Tursiops_truncatus
ENSLACG00000007112	RNPS1	84	87.866	ENSUAMG00000004462	RNPS1	88	87.866	Ursus_americanus
ENSLACG00000007112	RNPS1	84	87.866	ENSUMAG00000022327	RNPS1	78	87.866	Ursus_maritimus
ENSLACG00000007112	RNPS1	84	87.866	ENSVVUG00000009244	RNPS1	78	87.866	Vulpes_vulpes
ENSLACG00000007112	RNPS1	80	72.174	ENSXETG00000024439	rnps1	70	75.115	Xenopus_tropicalis