EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000007177 (Gene tree)
Gene ID: 102363704
Gene Symbol: RBM12B
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2070 bases
Position: chrJH128325.1:261216-263285
Accession: 102363704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008107	RRM_1	PF00076.22	2.4e-32	1	3
ENSLACP00000008107	RRM_1	PF00076.22	2.4e-32	2	3
ENSLACP00000008107	RRM_1	PF00076.22	2.4e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008173	RBM12B-201	2070	XM_006008385	ENSLACP00000008107	689 (aa)	XP_006008447	H3AEN6

Gene Model

Click here to download ENSLACG00000007177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000007177	RBM12B	74	36.000	ENSLACG00000004394	-	79	36.000
ENSLACG00000007177	RBM12B	97	38.158	ENSLACG00000009507	GRSF1	80	38.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007177	RBM12B	100	52.206	ENSG00000183808	RBM12B	100	78.049	Homo_sapiens
ENSLACG00000007177	RBM12B	100	40.000	ENSAPOG00000013963	rbm12b	100	39.489	Acanthochromis_polyacanthus
ENSLACG00000007177	RBM12B	58	50.000	ENSAPOG00000008836	zgc:153215	87	50.000	Acanthochromis_polyacanthus
ENSLACG00000007177	RBM12B	95	59.459	ENSAMEG00000007134	RBM12B	73	59.459	Ailuropoda_melanoleuca
ENSLACG00000007177	RBM12B	97	38.035	ENSACIG00000014943	rbm12b	96	75.824	Amphilophus_citrinellus
ENSLACG00000007177	RBM12B	100	39.321	ENSAOCG00000024270	rbm12b	100	39.716	Amphiprion_ocellaris
ENSLACG00000007177	RBM12B	99	32.902	ENSAPEG00000022079	rbm12b	99	42.735	Amphiprion_percula
ENSLACG00000007177	RBM12B	99	39.943	ENSATEG00000004578	rbm12b	97	39.885	Anabas_testudineus
ENSLACG00000007177	RBM12B	100	52.441	ENSAPLG00000002020	RBM12B	100	52.580	Anas_platyrhynchos
ENSLACG00000007177	RBM12B	100	41.897	ENSACAG00000003463	RBM12B	71	41.034	Anolis_carolinensis
ENSLACG00000007177	RBM12B	100	51.471	ENSANAG00000034015	RBM12B	78	51.471	Aotus_nancymaae
ENSLACG00000007177	RBM12B	100	40.115	ENSACLG00000005575	rbm12b	99	39.149	Astatotilapia_calliptera
ENSLACG00000007177	RBM12B	100	32.850	ENSACLG00000005578	rbm12b	100	31.807	Astatotilapia_calliptera
ENSLACG00000007177	RBM12B	74	55.056	ENSAMXG00000020853	zgc:153215	69	55.056	Astyanax_mexicanus
ENSLACG00000007177	RBM12B	100	37.853	ENSAMXG00000041973	rbm12b	100	37.465	Astyanax_mexicanus
ENSLACG00000007177	RBM12B	95	57.658	ENSBTAG00000013408	RBM12B	72	57.658	Bos_taurus
ENSLACG00000007177	RBM12B	99	52.206	ENSCAFG00000009109	RBM12B	64	52.206	Canis_familiaris
ENSLACG00000007177	RBM12B	99	52.206	ENSCAFG00020012203	RBM12B	73	52.206	Canis_lupus_dingo
ENSLACG00000007177	RBM12B	79	49.818	ENSCHIG00000006790	RBM12B	71	48.727	Capra_hircus
ENSLACG00000007177	RBM12B	100	47.695	ENSTSYG00000012515	RBM12B	62	65.385	Carlito_syrichta
ENSLACG00000007177	RBM12B	99	54.412	ENSCAPG00000003543	RBM12B	67	54.412	Cavia_aperea
ENSLACG00000007177	RBM12B	99	54.412	ENSCPOG00000007815	RBM12B	67	54.412	Cavia_porcellus
ENSLACG00000007177	RBM12B	100	52.206	ENSCATG00000030769	RBM12B	76	52.206	Cercocebus_atys
ENSLACG00000007177	RBM12B	95	59.459	ENSCLAG00000017617	RBM12B	67	53.676	Chinchilla_lanigera
ENSLACG00000007177	RBM12B	100	52.206	ENSCSAG00000018559	RBM12B	65	52.206	Chlorocebus_sabaeus
ENSLACG00000007177	RBM12B	93	52.577	ENSCHOG00000008934	RBM12B	64	52.577	Choloepus_hoffmanni
ENSLACG00000007177	RBM12B	100	51.545	ENSCPBG00000003061	RBM12B	100	51.545	Chrysemys_picta_bellii
ENSLACG00000007177	RBM12B	100	52.206	ENSCANG00000030379	RBM12B	76	52.206	Colobus_angolensis_palliatus
ENSLACG00000007177	RBM12B	94	56.757	ENSCGRG00001008710	-	72	56.757	Cricetulus_griseus_chok1gshd
ENSLACG00000007177	RBM12B	100	40.476	ENSCSEG00000004610	rbm12b	97	40.056	Cynoglossus_semilaevis
ENSLACG00000007177	RBM12B	100	38.252	ENSCVAG00000011047	rbm12b	100	38.109	Cyprinodon_variegatus
ENSLACG00000007177	RBM12B	74	31.450	ENSDARG00000055889	zgc:153215	98	31.332	Danio_rerio
ENSLACG00000007177	RBM12B	100	37.586	ENSDARG00000079717	rbm12b	71	41.935	Danio_rerio
ENSLACG00000007177	RBM12B	99	52.206	ENSDNOG00000041608	RBM12B	64	52.206	Dasypus_novemcinctus
ENSLACG00000007177	RBM12B	96	60.360	ENSDORG00000024034	-	64	67.949	Dipodomys_ordii
ENSLACG00000007177	RBM12B	79	48.624	ENSETEG00000013005	-	69	48.073	Echinops_telfairi
ENSLACG00000007177	RBM12B	57	59.524	ENSEBUG00000010930	-	75	55.914	Eptatretus_burgeri
ENSLACG00000007177	RBM12B	95	58.559	ENSEASG00005016297	RBM12B	71	58.559	Equus_asinus_asinus
ENSLACG00000007177	RBM12B	99	51.429	ENSECAG00000017870	RBM12B	66	51.429	Equus_caballus
ENSLACG00000007177	RBM12B	99	52.206	ENSFCAG00000029274	RBM12B	74	52.206	Felis_catus
ENSLACG00000007177	RBM12B	100	50.140	ENSFALG00000014893	RBM12B	100	50.140	Ficedula_albicollis
ENSLACG00000007177	RBM12B	99	54.412	ENSFDAG00000005576	RBM12B	66	54.412	Fukomys_damarensis
ENSLACG00000007177	RBM12B	100	38.865	ENSFHEG00000016425	rbm12b	100	38.850	Fundulus_heteroclitus
ENSLACG00000007177	RBM12B	99	41.329	ENSGMOG00000013467	rbm12b	99	40.857	Gadus_morhua
ENSLACG00000007177	RBM12B	100	51.676	ENSGALG00000035129	RBM12B	100	51.748	Gallus_gallus
ENSLACG00000007177	RBM12B	100	39.511	ENSGAFG00000007224	rbm12b	100	38.793	Gambusia_affinis
ENSLACG00000007177	RBM12B	100	38.850	ENSGACG00000008682	rbm12b	99	37.693	Gasterosteus_aculeatus
ENSLACG00000007177	RBM12B	100	51.836	ENSGAGG00000009774	RBM12B	100	51.836	Gopherus_agassizii
ENSLACG00000007177	RBM12B	100	51.471	ENSGGOG00000011909	RBM12B	75	51.471	Gorilla_gorilla
ENSLACG00000007177	RBM12B	100	39.331	ENSHBUG00000016227	rbm12b	84	48.684	Haplochromis_burtoni
ENSLACG00000007177	RBM12B	95	60.360	ENSHGLG00000009063	RBM12B	65	60.360	Heterocephalus_glaber_female
ENSLACG00000007177	RBM12B	95	60.360	ENSHGLG00100021324	RBM12B	65	60.360	Heterocephalus_glaber_male
ENSLACG00000007177	RBM12B	100	38.594	ENSHCOG00000014952	rbm12b	100	37.946	Hippocampus_comes
ENSLACG00000007177	RBM12B	74	30.996	ENSIPUG00000019731	zgc:153215	98	31.111	Ictalurus_punctatus
ENSLACG00000007177	RBM12B	100	41.185	ENSIPUG00000001167	RBM12B	96	40.142	Ictalurus_punctatus
ENSLACG00000007177	RBM12B	99	52.941	ENSSTOG00000027445	RBM12B	79	52.941	Ictidomys_tridecemlineatus
ENSLACG00000007177	RBM12B	100	58.182	ENSJJAG00000004165	-	67	65.385	Jaculus_jaculus
ENSLACG00000007177	RBM12B	99	37.339	ENSKMAG00000013704	rbm12b	96	37.482	Kryptolebias_marmoratus
ENSLACG00000007177	RBM12B	99	37.196	ENSKMAG00000013715	rbm12b	99	37.339	Kryptolebias_marmoratus
ENSLACG00000007177	RBM12B	74	31.120	ENSLBEG00000002597	zgc:153215	98	31.818	Labrus_bergylta
ENSLACG00000007177	RBM12B	100	45.148	ENSLOCG00000018344	rbm12b	100	44.196	Lepisosteus_oculatus
ENSLACG00000007177	RBM12B	100	48.182	ENSLAFG00000029949	RBM12B	70	65.385	Loxodonta_africana
ENSLACG00000007177	RBM12B	100	52.206	ENSMFAG00000045430	RBM12B	76	52.206	Macaca_fascicularis
ENSLACG00000007177	RBM12B	100	52.206	ENSMMUG00000005558	RBM12B	74	52.206	Macaca_mulatta
ENSLACG00000007177	RBM12B	100	52.206	ENSMNEG00000041292	RBM12B	76	52.206	Macaca_nemestrina
ENSLACG00000007177	RBM12B	100	52.206	ENSMLEG00000037288	RBM12B	74	52.206	Mandrillus_leucophaeus
ENSLACG00000007177	RBM12B	100	42.493	ENSMAMG00000011998	rbm12b	100	42.493	Mastacembelus_armatus
ENSLACG00000007177	RBM12B	100	40.115	ENSMZEG00005015005	rbm12b	100	39.149	Maylandia_zebra
ENSLACG00000007177	RBM12B	100	37.980	ENSMZEG00005014845	rbm12b	99	37.037	Maylandia_zebra
ENSLACG00000007177	RBM12B	75	54.423	ENSMGAG00000011985	RBM12B	99	54.615	Meleagris_gallopavo
ENSLACG00000007177	RBM12B	94	57.658	ENSMAUG00000021752	-	75	57.658	Mesocricetus_auratus
ENSLACG00000007177	RBM12B	99	52.941	ENSMICG00000036969	RBM12B	76	52.941	Microcebus_murinus
ENSLACG00000007177	RBM12B	92	54.464	ENSMOCG00000005603	-	68	64.935	Microtus_ochrogaster
ENSLACG00000007177	RBM12B	92	75.581	ENSMMOG00000002404	rbm12b	94	75.581	Mola_mola
ENSLACG00000007177	RBM12B	100	54.130	ENSMODG00000007436	RBM12B	89	54.130	Monodelphis_domestica
ENSLACG00000007177	RBM12B	75	30.754	ENSMALG00000001222	zgc:153215	99	30.754	Monopterus_albus
ENSLACG00000007177	RBM12B	100	40.480	ENSMALG00000012059	rbm12b	100	39.604	Monopterus_albus
ENSLACG00000007177	RBM12B	95	50.450	ENSMUSG00000046667	Rbm12b1	71	66.234	Mus_musculus
ENSLACG00000007177	RBM12B	95	50.450	ENSMUSG00000052137	Rbm12b2	71	62.025	Mus_musculus
ENSLACG00000007177	RBM12B	95	51.351	MGP_SPRETEiJ_G0026765	-	64	63.636	Mus_spretus
ENSLACG00000007177	RBM12B	95	51.351	MGP_SPRETEiJ_G0026766	-	71	63.636	Mus_spretus
ENSLACG00000007177	RBM12B	95	58.559	ENSMPUG00000018637	RBM12B	62	58.559	Mustela_putorius_furo
ENSLACG00000007177	RBM12B	99	52.206	ENSMLUG00000002359	RBM12B	67	52.206	Myotis_lucifugus
ENSLACG00000007177	RBM12B	95	54.955	ENSNGAG00000002801	-	64	66.234	Nannospalax_galili
ENSLACG00000007177	RBM12B	100	39.574	ENSNBRG00000015057	rbm12b	100	39.545	Neolamprologus_brichardi
ENSLACG00000007177	RBM12B	100	52.206	ENSNLEG00000032050	RBM12B	74	52.206	Nomascus_leucogenys
ENSLACG00000007177	RBM12B	99	52.941	ENSODEG00000019204	RBM12B	62	67.949	Octodon_degus
ENSLACG00000007177	RBM12B	100	39.773	ENSONIG00000020612	rbm12b	100	39.321	Oreochromis_niloticus
ENSLACG00000007177	RBM12B	100	51.253	ENSOANG00000015735	-	97	51.253	Ornithorhynchus_anatinus
ENSLACG00000007177	RBM12B	99	52.206	ENSOCUG00000010353	RBM12B	68	65.385	Oryctolagus_cuniculus
ENSLACG00000007177	RBM12B	100	38.549	ENSORLG00000008228	rbm12b	97	79.762	Oryzias_latipes
ENSLACG00000007177	RBM12B	100	38.691	ENSORLG00020013619	rbm12b	98	79.762	Oryzias_latipes_hni
ENSLACG00000007177	RBM12B	100	38.407	ENSORLG00015019999	rbm12b	98	79.762	Oryzias_latipes_hsok
ENSLACG00000007177	RBM12B	100	39.522	ENSOMEG00000022523	rbm12b	97	39.028	Oryzias_melastigma
ENSLACG00000007177	RBM12B	100	52.206	ENSOGAG00000002979	RBM12B	67	52.206	Otolemur_garnettii
ENSLACG00000007177	RBM12B	99	52.206	ENSPTIG00000020071	RBM12B	74	52.206	Panthera_tigris_altaica
ENSLACG00000007177	RBM12B	100	50.735	ENSPTRG00000020420	RBM12B	74	50.735	Pan_troglodytes
ENSLACG00000007177	RBM12B	100	52.206	ENSPANG00000035535	RBM12B	74	52.206	Papio_anubis
ENSLACG00000007177	RBM12B	100	41.903	ENSPKIG00000018719	rbm12b	98	41.940	Paramormyrops_kingsleyae
ENSLACG00000007177	RBM12B	74	32.397	ENSPKIG00000014851	zgc:153215	99	32.563	Paramormyrops_kingsleyae
ENSLACG00000007177	RBM12B	100	52.321	ENSPSIG00000001348	RBM12B	100	52.321	Pelodiscus_sinensis
ENSLACG00000007177	RBM12B	68	42.450	ENSPMGG00000012348	-	94	42.450	Periophthalmus_magnuspinnatus
ENSLACG00000007177	RBM12B	98	55.856	ENSPEMG00000008279	-	75	55.856	Peromyscus_maniculatus_bairdii
ENSLACG00000007177	RBM12B	100	53.954	ENSPCIG00000008556	RBM12B	91	53.954	Phascolarctos_cinereus
ENSLACG00000007177	RBM12B	63	46.602	ENSPFOG00000017451	zgc:153215	68	46.535	Poecilia_formosa
ENSLACG00000007177	RBM12B	100	39.174	ENSPFOG00000020937	rbm12b	97	38.897	Poecilia_formosa
ENSLACG00000007177	RBM12B	100	39.174	ENSPLAG00000018782	rbm12b	100	38.897	Poecilia_latipinna
ENSLACG00000007177	RBM12B	60	54.545	ENSPLAG00000000232	zgc:153215	92	54.545	Poecilia_latipinna
ENSLACG00000007177	RBM12B	60	53.165	ENSPMEG00000016662	zgc:153215	92	53.165	Poecilia_mexicana
ENSLACG00000007177	RBM12B	100	39.112	ENSPMEG00000011418	rbm12b	100	38.897	Poecilia_mexicana
ENSLACG00000007177	RBM12B	100	39.080	ENSPREG00000020770	rbm12b	100	38.793	Poecilia_reticulata
ENSLACG00000007177	RBM12B	100	52.206	ENSPPYG00000018745	RBM12B	65	52.206	Pongo_abelii
ENSLACG00000007177	RBM12B	100	52.941	ENSPCOG00000023546	RBM12B	75	52.941	Propithecus_coquereli
ENSLACG00000007177	RBM12B	95	58.559	ENSPVAG00000011803	RBM12B	67	58.559	Pteropus_vampyrus
ENSLACG00000007177	RBM12B	100	39.886	ENSPNYG00000016696	rbm12b	100	39.291	Pundamilia_nyererei
ENSLACG00000007177	RBM12B	75	30.325	ENSPNAG00000025628	zgc:153215	99	30.144	Pygocentrus_nattereri
ENSLACG00000007177	RBM12B	100	41.252	ENSPNAG00000008126	rbm12b	96	40.986	Pygocentrus_nattereri
ENSLACG00000007177	RBM12B	95	53.153	ENSRNOG00000016330	Rbm12b	70	64.557	Rattus_norvegicus
ENSLACG00000007177	RBM12B	78	49.177	ENSRNOG00000055292	LOC679087	68	48.727	Rattus_norvegicus
ENSLACG00000007177	RBM12B	100	52.206	ENSRBIG00000035046	RBM12B	74	52.206	Rhinopithecus_bieti
ENSLACG00000007177	RBM12B	100	52.206	ENSRROG00000023660	RBM12B	78	52.206	Rhinopithecus_roxellana
ENSLACG00000007177	RBM12B	100	50.735	ENSSBOG00000027592	RBM12B	74	50.735	Saimiri_boliviensis_boliviensis
ENSLACG00000007177	RBM12B	100	54.482	ENSSHAG00000015335	RBM12B	91	54.482	Sarcophilus_harrisii
ENSLACG00000007177	RBM12B	100	41.679	ENSSFOG00015001584	rbm12b	99	41.880	Scleropages_formosus
ENSLACG00000007177	RBM12B	74	34.429	ENSSFOG00015009427	zgc:153215	99	34.351	Scleropages_formosus
ENSLACG00000007177	RBM12B	100	40.935	ENSSMAG00000019708	rbm12b	100	39.749	Scophthalmus_maximus
ENSLACG00000007177	RBM12B	74	30.654	ENSSDUG00000012545	zgc:153215	99	30.654	Seriola_dumerili
ENSLACG00000007177	RBM12B	99	40.165	ENSSDUG00000006856	rbm12b	99	40.220	Seriola_dumerili
ENSLACG00000007177	RBM12B	99	40.979	ENSSLDG00000016156	rbm12b	99	40.725	Seriola_lalandi_dorsalis
ENSLACG00000007177	RBM12B	81	48.239	ENSSARG00000011845	-	73	47.183	Sorex_araneus
ENSLACG00000007177	RBM12B	100	50.377	ENSSPUG00000016954	RBM12B	92	50.376	Sphenodon_punctatus
ENSLACG00000007177	RBM12B	100	39.076	ENSSPAG00000006774	rbm12b	100	38.810	Stegastes_partitus
ENSLACG00000007177	RBM12B	99	52.941	ENSSSCG00000006110	RBM12B	65	52.941	Sus_scrofa
ENSLACG00000007177	RBM12B	78	49.538	ENSTGUG00000011860	RBM12B	100	49.168	Taeniopygia_guttata
ENSLACG00000007177	RBM12B	100	39.155	ENSTRUG00000013738	rbm12b	100	38.385	Takifugu_rubripes
ENSLACG00000007177	RBM12B	81	47.979	ENSTBEG00000000449	RBM12B	68	46.749	Tupaia_belangeri
ENSLACG00000007177	RBM12B	95	58.559	ENSUAMG00000023639	RBM12B	70	58.559	Ursus_americanus
ENSLACG00000007177	RBM12B	95	58.559	ENSUMAG00000016008	RBM12B	67	58.559	Ursus_maritimus
ENSLACG00000007177	RBM12B	87	63.478	ENSVPAG00000001080	RBM12B	51	57.576	Vicugna_pacos
ENSLACG00000007177	RBM12B	99	52.206	ENSVVUG00000002694	RBM12B	73	52.206	Vulpes_vulpes
ENSLACG00000007177	RBM12B	87	52.222	ENSXETG00000014696	rbm12b	83	52.222	Xenopus_tropicalis
ENSLACG00000007177	RBM12B	100	42.113	ENSXETG00000014694	rbm12b	100	41.586	Xenopus_tropicalis
ENSLACG00000007177	RBM12B	75	31.138	ENSXETG00000025920	-	91	42.697	Xenopus_tropicalis
ENSLACG00000007177	RBM12B	75	30.241	ENSXCOG00000019654	zgc:153215	83	51.163	Xiphophorus_couchianus
ENSLACG00000007177	RBM12B	77	42.571	ENSXCOG00000019735	-	99	43.143	Xiphophorus_couchianus
ENSLACG00000007177	RBM12B	58	55.000	ENSXMAG00000013169	-	85	55.000	Xiphophorus_maculatus
ENSLACG00000007177	RBM12B	100	38.506	ENSXMAG00000014213	rbm12b	100	38.218	Xiphophorus_maculatus