EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLACG00000007210 (Gene tree)
Gene ID
102356805
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Minus strand
Length
23497 bases
Position
chrJH129028.1:263257-286753
Accession
102356805
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000008142tRNA_anti-codonPF01336.254.6e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000008208RPA1-2012053XM_006010806ENSLACP00000008142495 (aa)XP_006010868H3AES1
Gene Model
Click here to download ENSLACG00000007210's gene model file
Pathways
Pathway IDPathway NameSource
lcm03030DNA replicationKEGG
lcm03420Nucleotide excision repairKEGG
lcm03430Mismatch repairKEGG
lcm03440Homologous recombinationKEGG
lcm03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007210's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000007210RPA19755.694ENSAPOG00000019409RPA16955.694Acanthochromis_polyacanthus
ENSLACG00000007210RPA18963.883ENSAPOG00000011658rpa17963.883Acanthochromis_polyacanthus
ENSLACG00000007210RPA19966.200ENSAMEG00000007706RPA18066.200Ailuropoda_melanoleuca
ENSLACG00000007210RPA19458.584ENSACIG00000012881RPA17758.584Amphilophus_citrinellus
ENSLACG00000007210RPA19955.123ENSACIG00000007277rpa18255.123Amphilophus_citrinellus
ENSLACG00000007210RPA19557.569ENSAOCG00000009003RPA17257.569Amphiprion_ocellaris
ENSLACG00000007210RPA19362.987ENSAOCG00000023376rpa18163.457Amphiprion_ocellaris
ENSLACG00000007210RPA19363.203ENSAPEG00000008634rpa18163.676Amphiprion_percula
ENSLACG00000007210RPA19558.422ENSAPEG00000019132RPA17058.422Amphiprion_percula
ENSLACG00000007210RPA19264.912ENSATEG00000022024rpa18064.912Anabas_testudineus
ENSLACG00000007210RPA19557.415ENSATEG00000006443RPA17257.415Anabas_testudineus
ENSLACG00000007210RPA19956.392ENSAPLG00000012442RPA18556.743Anas_platyrhynchos
ENSLACG00000007210RPA19361.505ENSACAG00000014490RPA18259.312Anolis_carolinensis
ENSLACG00000007210RPA19967.400ENSANAG00000023456RPA18268.842Aotus_nancymaae
ENSLACG00000007210RPA19558.650ENSACLG00000005223RPA17358.650Astatotilapia_calliptera
ENSLACG00000007210RPA19463.871ENSACLG00000006640rpa18363.871Astatotilapia_calliptera
ENSLACG00000007210RPA19662.474ENSAMXG00000008418rpa18264.208Astyanax_mexicanus
ENSLACG00000007210RPA19964.881ENSBTAG00000009711RPA18164.881Bos_taurus
ENSLACG00000007210RPA19668.067ENSCJAG00000001848RPA18167.265Callithrix_jacchus
ENSLACG00000007210RPA19966.333ENSCAFG00000019249RPA18166.533Canis_familiaris
ENSLACG00000007210RPA19966.333ENSCAFG00020009847RPA18166.533Canis_lupus_dingo
ENSLACG00000007210RPA19965.600ENSCHIG00000026308RPA18165.800Capra_hircus
ENSLACG00000007210RPA19967.066ENSTSYG00000003482-8167.066Carlito_syrichta
ENSLACG00000007210RPA19967.000ENSCPOG00000000035RPA18167.000Cavia_porcellus
ENSLACG00000007210RPA19658.910ENSCCAG00000010981RPA17957.769Cebus_capucinus
ENSLACG00000007210RPA19966.135ENSCLAG00000005185-8166.135Chinchilla_lanigera
ENSLACG00000007210RPA19962.800ENSCLAG00000015045-8062.800Chinchilla_lanigera
ENSLACG00000007210RPA19659.375ENSCSAG00000013833RPA17958.250Chlorocebus_sabaeus
ENSLACG00000007210RPA18870.252ENSCHOG00000009454-9970.252Choloepus_hoffmanni
ENSLACG00000007210RPA19965.737ENSCHOG00000013540-8565.737Choloepus_hoffmanni
ENSLACG00000007210RPA19968.663ENSCPBG00000020377RPA18768.663Chrysemys_picta_bellii
ENSLACG00000007210RPA19543.568ENSCING00000023482-7743.568Ciona_intestinalis
ENSLACG00000007210RPA19270.460ENSCANG00000030911RPA17970.460Colobus_angolensis_palliatus
ENSLACG00000007210RPA19966.142ENSCGRG00001008197Rpa18166.142Cricetulus_griseus_chok1gshd
ENSLACG00000007210RPA19767.140ENSCGRG00000000582Rpa19667.068Cricetulus_griseus_crigri
ENSLACG00000007210RPA19953.678ENSCSEG00000012726RPA17855.072Cynoglossus_semilaevis
ENSLACG00000007210RPA19860.455ENSCSEG00000013066rpa17862.391Cynoglossus_semilaevis
ENSLACG00000007210RPA19356.739ENSCVAG00000013446-6756.739Cyprinodon_variegatus
ENSLACG00000007210RPA19463.812ENSCVAG00000019431rpa18263.812Cyprinodon_variegatus
ENSLACG00000007210RPA19861.237ENSDARG00000003938rpa17961.237Danio_rerio
ENSLACG00000007210RPA19966.335ENSDNOG00000017218RPA18166.335Dasypus_novemcinctus
ENSLACG00000007210RPA19965.400ENSDORG00000006199Rpa18264.683Dipodomys_ordii
ENSLACG00000007210RPA18646.313FBgn0010173RpA-707147.005Drosophila_melanogaster
ENSLACG00000007210RPA17669.534ENSETEG00000017608RPA16467.677Echinops_telfairi
ENSLACG00000007210RPA19965.800ENSEASG00005009372RPA18669.451Equus_asinus_asinus
ENSLACG00000007210RPA19965.800ENSECAG00000023886RPA18165.800Equus_caballus
ENSLACG00000007210RPA18570.000ENSEEUG00000002186-6870.000Erinaceus_europaeus
ENSLACG00000007210RPA18561.374ENSELUG00000006136RPA18361.374Esox_lucius
ENSLACG00000007210RPA19761.237ENSELUG00000021071rpa17861.443Esox_lucius
ENSLACG00000007210RPA19965.339ENSFCAG00000006306RPA18165.339Felis_catus
ENSLACG00000007210RPA19965.737ENSFALG00000006575RPA18165.737Ficedula_albicollis
ENSLACG00000007210RPA19968.000ENSFDAG00000007720RPA18168.000Fukomys_damarensis
ENSLACG00000007210RPA19960.327ENSFHEG00000003580rpa18060.327Fundulus_heteroclitus
ENSLACG00000007210RPA19760.460ENSGMOG00000010382rpa18260.460Gadus_morhua
ENSLACG00000007210RPA19964.741ENSGALG00000003072RPA18164.741Gallus_gallus
ENSLACG00000007210RPA19855.852ENSGAFG00000020953RPA17255.852Gambusia_affinis
ENSLACG00000007210RPA19960.600ENSGAFG00000012916rpa18160.600Gambusia_affinis
ENSLACG00000007210RPA19958.811ENSGACG00000010856rpa18059.548Gasterosteus_aculeatus
ENSLACG00000007210RPA19968.862ENSGAGG00000013611RPA18168.862Gopherus_agassizii
ENSLACG00000007210RPA19270.549ENSGGOG00000014186RPA17770.549Gorilla_gorilla
ENSLACG00000007210RPA18954.709ENSHBUG00000009348RPA17654.709Haplochromis_burtoni
ENSLACG00000007210RPA19961.885ENSHBUG00000017773rpa18061.885Haplochromis_burtoni
ENSLACG00000007210RPA19967.131ENSHGLG00000008846RPA18167.530Heterocephalus_glaber_female
ENSLACG00000007210RPA19964.143ENSHGLG00100000799-8264.143Heterocephalus_glaber_male
ENSLACG00000007210RPA19967.131ENSHGLG00100017755-8167.530Heterocephalus_glaber_male
ENSLACG00000007210RPA19659.833ENSHGLG00100002005-7859.544Heterocephalus_glaber_male
ENSLACG00000007210RPA19347.122ENSHCOG00000000351RPA18047.122Hippocampus_comes
ENSLACG00000007210RPA19259.211ENSHCOG00000001401rpa18156.513Hippocampus_comes
ENSLACG00000007210RPA19860.288ENSIPUG00000004400rpa17860.494Ictalurus_punctatus
ENSLACG00000007210RPA19965.191ENSSTOG00000022475RPA18265.191Ictidomys_tridecemlineatus
ENSLACG00000007210RPA19966.402ENSJJAG00000000876Rpa18366.402Jaculus_jaculus
ENSLACG00000007210RPA19062.247ENSKMAG00000005605rpa17362.472Kryptolebias_marmoratus
ENSLACG00000007210RPA19755.918ENSKMAG00000000234RPA18055.918Kryptolebias_marmoratus
ENSLACG00000007210RPA19960.521ENSLBEG00000021604rpa17863.956Labrus_bergylta
ENSLACG00000007210RPA19555.876ENSLBEG00000002281RPA17255.876Labrus_bergylta
ENSLACG00000007210RPA19962.626ENSLOCG00000006397rpa18162.626Lepisosteus_oculatus
ENSLACG00000007210RPA19866.329ENSLAFG00000015354RPA17966.329Loxodonta_africana
ENSLACG00000007210RPA17669.737ENSMFAG00000036138-7967.413Macaca_fascicularis
ENSLACG00000007210RPA19964.242ENSMMUG00000002442-8264.242Macaca_mulatta
ENSLACG00000007210RPA19669.247ENSMMUG00000011604-8267.400Macaca_mulatta
ENSLACG00000007210RPA19669.038ENSMNEG00000031632-8367.200Macaca_nemestrina
ENSLACG00000007210RPA19863.599ENSMNEG00000029837-8963.599Macaca_nemestrina
ENSLACG00000007210RPA19667.364ENSMLEG00000038768-8166.061Mandrillus_leucophaeus
ENSLACG00000007210RPA19861.317ENSMAMG00000017993rpa18662.208Mastacembelus_armatus
ENSLACG00000007210RPA19753.831ENSMAMG00000020097RPA17155.301Mastacembelus_armatus
ENSLACG00000007210RPA19558.650ENSMZEG00005024731RPA17358.650Maylandia_zebra
ENSLACG00000007210RPA19961.885ENSMZEG00005007551rpa18061.885Maylandia_zebra
ENSLACG00000007210RPA19964.343ENSMGAG00000005315RPA18064.343Meleagris_gallopavo
ENSLACG00000007210RPA19966.733ENSMAUG00000010474Rpa18266.934Mesocricetus_auratus
ENSLACG00000007210RPA19966.068ENSMICG00000012867RPA18066.267Microcebus_murinus
ENSLACG00000007210RPA19966.132ENSMOCG00000013019Rpa18166.132Microtus_ochrogaster
ENSLACG00000007210RPA19855.761ENSMMOG00000010868RPA18355.794Mola_mola
ENSLACG00000007210RPA19960.123ENSMMOG00000014292rpa18360.123Mola_mola
ENSLACG00000007210RPA19967.992ENSMODG00000010549RPA18167.992Monodelphis_domestica
ENSLACG00000007210RPA19158.537ENSMALG00000001208RPA16358.537Monopterus_albus
ENSLACG00000007210RPA19961.759ENSMALG00000011453rpa18061.963Monopterus_albus
ENSLACG00000007210RPA19666.529MGP_CAROLIEiJ_G0016734Rpa18164.822Mus_caroli
ENSLACG00000007210RPA19667.500ENSMUSG00000000751Rpa17866.397Mus_musculus
ENSLACG00000007210RPA19667.355MGP_PahariEiJ_G0017871Rpa17966.265Mus_pahari
ENSLACG00000007210RPA19667.500MGP_SPRETEiJ_G0017577Rpa17866.397Mus_spretus
ENSLACG00000007210RPA19965.606ENSMPUG00000013119RPA18165.606Mustela_putorius_furo
ENSLACG00000007210RPA19965.469ENSMLUG00000006113RPA18065.469Myotis_lucifugus
ENSLACG00000007210RPA19966.733ENSNGAG00000004522Rpa17966.733Nannospalax_galili
ENSLACG00000007210RPA19753.469ENSNBRG00000009672RPA17953.469Neolamprologus_brichardi
ENSLACG00000007210RPA19463.656ENSNBRG00000020595rpa18263.656Neolamprologus_brichardi
ENSLACG00000007210RPA19668.908ENSNLEG00000017149RPA18067.742Nomascus_leucogenys
ENSLACG00000007210RPA19957.738ENSMEUG00000006714RPA18257.738Notamacropus_eugenii
ENSLACG00000007210RPA19966.533ENSODEG00000009038RPA18066.533Octodon_degus
ENSLACG00000007210RPA19962.424ENSONIG00000013135rpa18062.424Oreochromis_niloticus
ENSLACG00000007210RPA19967.331ENSOANG00000010880RPA18367.331Ornithorhynchus_anatinus
ENSLACG00000007210RPA19967.800ENSOCUG00000001504RPA17767.800Oryctolagus_cuniculus
ENSLACG00000007210RPA19954.990ENSORLG00000003368RPA17354.990Oryzias_latipes
ENSLACG00000007210RPA19961.100ENSORLG00000004856rpa18161.100Oryzias_latipes
ENSLACG00000007210RPA19954.786ENSORLG00020015284RPA17254.786Oryzias_latipes_hni
ENSLACG00000007210RPA19961.100ENSORLG00020008980rpa18161.100Oryzias_latipes_hni
ENSLACG00000007210RPA18757.077ENSORLG00015005867-9657.077Oryzias_latipes_hsok
ENSLACG00000007210RPA19357.235ENSORLG00015020383RPA17057.235Oryzias_latipes_hsok
ENSLACG00000007210RPA19961.100ENSORLG00015013982rpa18161.100Oryzias_latipes_hsok
ENSLACG00000007210RPA19959.350ENSOMEG00000004704rpa18159.350Oryzias_melastigma
ENSLACG00000007210RPA19455.889ENSOMEG00000011040RPA18155.889Oryzias_melastigma
ENSLACG00000007210RPA17063.095ENSOGAG00000029379-7563.095Otolemur_garnettii
ENSLACG00000007210RPA19965.200ENSOGAG00000005581-8165.200Otolemur_garnettii
ENSLACG00000007210RPA19965.476ENSOARG00000014479RPA18165.675Ovis_aries
ENSLACG00000007210RPA19668.842ENSPPAG00000039680RPA18067.677Pan_paniscus
ENSLACG00000007210RPA19965.139ENSPPRG00000011807RPA18165.139Panthera_pardus
ENSLACG00000007210RPA19964.741ENSPTIG00000007898RPA18164.741Panthera_tigris_altaica
ENSLACG00000007210RPA19668.842ENSPTRG00000008539RPA18067.677Pan_troglodytes
ENSLACG00000007210RPA19669.247ENSPANG00000024592RPA18167.400Papio_anubis
ENSLACG00000007210RPA18664.000ENSPKIG00000008053rpa17561.039Paramormyrops_kingsleyae
ENSLACG00000007210RPA19967.864ENSPSIG00000015617RPA18367.864Pelodiscus_sinensis
ENSLACG00000007210RPA19855.578ENSPMGG00000000543RPA18855.578Periophthalmus_magnuspinnatus
ENSLACG00000007210RPA18965.760ENSPMGG00000011589rpa17765.986Periophthalmus_magnuspinnatus
ENSLACG00000007210RPA19966.799ENSPEMG00000021061Rpa18066.799Peromyscus_maniculatus_bairdii
ENSLACG00000007210RPA19667.842ENSPCIG00000019049RPA18066.403Phascolarctos_cinereus
ENSLACG00000007210RPA19961.200ENSPFOG00000003987rpa18161.200Poecilia_formosa
ENSLACG00000007210RPA19961.000ENSPLAG00000004984rpa18161.000Poecilia_latipinna
ENSLACG00000007210RPA19256.264ENSPLAG00000008844-7056.264Poecilia_latipinna
ENSLACG00000007210RPA19961.200ENSPMEG00000020602rpa18164.009Poecilia_mexicana
ENSLACG00000007210RPA19256.264ENSPMEG00000003627-7056.264Poecilia_mexicana
ENSLACG00000007210RPA19855.852ENSPREG00000010119RPA17155.852Poecilia_reticulata
ENSLACG00000007210RPA19256.044ENSPREG00000010174rpa17556.044Poecilia_reticulata
ENSLACG00000007210RPA19967.203ENSPCOG00000001799RPA18067.203Propithecus_coquereli
ENSLACG00000007210RPA19966.200ENSPVAG00000002149RPA18166.200Pteropus_vampyrus
ENSLACG00000007210RPA19558.439ENSPNYG00000024165RPA17358.439Pundamilia_nyererei
ENSLACG00000007210RPA19962.090ENSPNYG00000016316rpa18263.871Pundamilia_nyererei
ENSLACG00000007210RPA19356.803ENSPNAG00000008599rpa18155.601Pygocentrus_nattereri
ENSLACG00000007210RPA19569.280ENSRNOG00000003123Rpa18067.735Rattus_norvegicus
ENSLACG00000007210RPA19966.866ENSRBIG00000036587RPA18166.866Rhinopithecus_bieti
ENSLACG00000007210RPA19961.677ENSRROG00000043278RPA18061.677Rhinopithecus_roxellana
ENSLACG00000007210RPA19135.320YAR007CRFA17135.320Saccharomyces_cerevisiae
ENSLACG00000007210RPA19668.697ENSSBOG00000030233RPA18667.066Saimiri_boliviensis_boliviensis
ENSLACG00000007210RPA19767.901ENSSHAG00000007969RPA18066.667Sarcophilus_harrisii
ENSLACG00000007210RPA19963.030ENSSFOG00015005362rpa17463.030Scleropages_formosus
ENSLACG00000007210RPA19756.936ENSSMAG00000019746RPA17256.936Scophthalmus_maximus
ENSLACG00000007210RPA18861.149ENSSDUG00000016358RPA17156.592Seriola_dumerili
ENSLACG00000007210RPA19961.963ENSSDUG00000011949rpa18163.136Seriola_dumerili
ENSLACG00000007210RPA19962.168ENSSLDG00000011806rpa18163.347Seriola_lalandi_dorsalis
ENSLACG00000007210RPA18860.690ENSSLDG00000020784RPA16758.621Seriola_lalandi_dorsalis
ENSLACG00000007210RPA18666.667ENSSARG00000007506RPA17266.667Sorex_araneus
ENSLACG00000007210RPA19964.729ENSSPUG00000007223RPA18264.729Sphenodon_punctatus
ENSLACG00000007210RPA19960.202ENSSPAG00000009903rpa18160.202Stegastes_partitus
ENSLACG00000007210RPA19557.692ENSSPAG00000011165RPA17857.692Stegastes_partitus
ENSLACG00000007210RPA19965.669ENSSSCG00000017822RPA18365.868Sus_scrofa
ENSLACG00000007210RPA19966.667ENSTGUG00000005775RPA18166.667Taeniopygia_guttata
ENSLACG00000007210RPA18759.353ENSTRUG00000000405RPA16854.637Takifugu_rubripes
ENSLACG00000007210RPA19364.069ENSTRUG00000003616rpa17664.069Takifugu_rubripes
ENSLACG00000007210RPA19962.675ENSTNIG00000016199rpa18162.874Tetraodon_nigroviridis
ENSLACG00000007210RPA18970.975ENSTBEG00000002709RPA17470.975Tupaia_belangeri
ENSLACG00000007210RPA19965.079ENSTTRG00000001169RPA18165.476Tursiops_truncatus
ENSLACG00000007210RPA19879.592ENSUAMG00000015676RPA18079.592Ursus_americanus
ENSLACG00000007210RPA19965.331ENSUMAG00000009328RPA18166.333Ursus_maritimus
ENSLACG00000007210RPA19963.419ENSVPAG00000009443RPA18163.419Vicugna_pacos
ENSLACG00000007210RPA19966.333ENSVVUG00000021715RPA18166.533Vulpes_vulpes
ENSLACG00000007210RPA19867.835ENSXETG00000013538rpa18166.206Xenopus_tropicalis
ENSLACG00000007210RPA19855.624ENSXCOG00000009899-8655.624Xiphophorus_couchianus
ENSLACG00000007210RPA19359.653ENSXCOG00000010068rpa17859.653Xiphophorus_couchianus
ENSLACG00000007210RPA19960.606ENSXMAG00000004102rpa18760.606Xiphophorus_maculatus
ENSLACG00000007210RPA19855.647ENSXMAG00000010333RPA16755.647Xiphophorus_maculatus

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