EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000007289 (Gene tree)
Gene ID: -
Gene Symbol: si:dkeyp-69b9.3
Alias: -
Full Name: myocardin-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 7619 bases
Position: chrJH128768.1:267908-275526
Accession: 102345990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008236	SAP	PF02037.27	3.4e-12	1	1
ENSLACP00000008235	SAP	PF02037.27	3.5e-12	1	1
ENSLACP00000008237	SAP	PF02037.27	4.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008301	-	2619	-	ENSLACP00000008235	663 (aa)	-	H3AF14
ENSLACT00000008303	-	2529	XM_006010068	ENSLACP00000008237	633 (aa)	-	H3AF16
ENSLACT00000008302	-	2607	-	ENSLACP00000008236	659 (aa)	-	H3AF15

Gene Model

Click here to download ENSLACG00000007289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007289	si:dkeyp-69b9.3	96	33.909	ENSACIG00000006038	si:dkeyp-69b9.3	59	34.615	Amphilophus_citrinellus
ENSLACG00000007289	si:dkeyp-69b9.3	72	48.018	ENSATEG00000022482	si:dkeyp-69b9.3	71	37.457	Anabas_testudineus
ENSLACG00000007289	si:dkeyp-69b9.3	60	41.473	ENSCSEG00000018785	si:dkeyp-69b9.3	95	36.920	Cynoglossus_semilaevis
ENSLACG00000007289	si:dkeyp-69b9.3	81	46.875	ENSDARG00000088881	si:dkeyp-69b9.3	63	36.025	Danio_rerio
ENSLACG00000007289	si:dkeyp-69b9.3	60	50.000	ENSELUG00000015494	si:dkeyp-69b9.3	59	57.746	Esox_lucius
ENSLACG00000007289	si:dkeyp-69b9.3	53	37.500	ENSGAFG00000013380	si:dkeyp-69b9.3	61	35.500	Gambusia_affinis
ENSLACG00000007289	si:dkeyp-69b9.3	51	32.923	ENSHBUG00000013698	si:dkeyp-69b9.3	54	34.252	Haplochromis_burtoni
ENSLACG00000007289	si:dkeyp-69b9.3	70	43.295	ENSMAMG00000019677	si:dkeyp-69b9.3	52	35.446	Mastacembelus_armatus
ENSLACG00000007289	si:dkeyp-69b9.3	50	37.572	ENSMODG00000012937	-	56	38.793	Monodelphis_domestica
ENSLACG00000007289	si:dkeyp-69b9.3	79	33.210	ENSMALG00000009733	si:dkeyp-69b9.3	68	33.943	Monopterus_albus
ENSLACG00000007289	si:dkeyp-69b9.3	51	33.538	ENSNBRG00000002905	si:dkeyp-69b9.3	54	34.517	Neolamprologus_brichardi
ENSLACG00000007289	si:dkeyp-69b9.3	51	33.333	ENSOMEG00000011151	si:dkeyp-69b9.3	60	32.735	Oryzias_melastigma
ENSLACG00000007289	si:dkeyp-69b9.3	76	41.026	ENSPKIG00000012523	si:dkeyp-69b9.3	50	36.667	Paramormyrops_kingsleyae
ENSLACG00000007289	si:dkeyp-69b9.3	99	37.202	ENSPFOG00000010279	si:dkeyp-69b9.3	81	36.970	Poecilia_formosa
ENSLACG00000007289	si:dkeyp-69b9.3	57	60.625	ENSPLAG00000004836	si:dkeyp-69b9.3	57	54.795	Poecilia_latipinna
ENSLACG00000007289	si:dkeyp-69b9.3	99	36.389	ENSPMEG00000002155	si:dkeyp-69b9.3	77	36.377	Poecilia_mexicana
ENSLACG00000007289	si:dkeyp-69b9.3	51	33.231	ENSPNYG00000001718	si:dkeyp-69b9.3	54	34.320	Pundamilia_nyererei
ENSLACG00000007289	si:dkeyp-69b9.3	79	49.057	ENSPNAG00000018127	si:dkeyp-69b9.3	92	33.821	Pygocentrus_nattereri
ENSLACG00000007289	si:dkeyp-69b9.3	65	52.830	ENSSFOG00015000936	si:dkeyp-69b9.3	68	34.937	Scleropages_formosus
ENSLACG00000007289	si:dkeyp-69b9.3	67	47.303	ENSSDUG00000009040	si:dkeyp-69b9.3	100	34.703	Seriola_dumerili
ENSLACG00000007289	si:dkeyp-69b9.3	69	46.825	ENSSLDG00000022553	si:dkeyp-69b9.3	77	34.728	Seriola_lalandi_dorsalis
ENSLACG00000007289	si:dkeyp-69b9.3	64	46.667	ENSTRUG00000019579	si:dkeyp-69b9.3	81	43.624	Takifugu_rubripes
ENSLACG00000007289	si:dkeyp-69b9.3	100	47.226	ENSXETG00000030651	-	82	44.653	Xenopus_tropicalis
ENSLACG00000007289	si:dkeyp-69b9.3	99	34.697	ENSXMAG00000012042	si:dkeyp-69b9.3	77	34.571	Xiphophorus_maculatus