EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000007383 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2520 bases
Position: chrJH129063.1:272481-275000
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008342	RVT_1	PF00078.27	6.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008408	-	2208	-	ENSLACP00000008342	736 (aa)	-	H3AFC1

Gene Model

Click here to download ENSLACG00000007383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007383's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000007383	-	83	87.500	ENSLACG00000005123	-	76	87.500
ENSLACG00000007383	-	93	84.902	ENSLACG00000015903	-	82	85.169
ENSLACG00000007383	-	51	31.701	ENSLACG00000006232	-	100	32.869
ENSLACG00000007383	-	52	89.487	ENSLACG00000014709	-	98	89.487
ENSLACG00000007383	-	95	47.732	ENSLACG00000002477	-	92	47.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007383	-	79	40.541	ENSORLG00000030308	-	75	35.475	Oryzias_latipes
ENSLACG00000007383	-	79	40.125	ENSORLG00000030578	-	75	35.196	Oryzias_latipes
ENSLACG00000007383	-	79	40.333	ENSORLG00015013910	-	82	35.196	Oryzias_latipes_hsok
ENSLACG00000007383	-	95	41.079	ENSORLG00015002919	-	74	41.107	Oryzias_latipes_hsok
ENSLACG00000007383	-	91	49.658	ENSPSIG00000000104	-	96	49.658	Pelodiscus_sinensis
ENSLACG00000007383	-	97	50.207	ENSPSIG00000001183	-	75	50.207	Pelodiscus_sinensis
ENSLACG00000007383	-	97	50.207	ENSPSIG00000001155	-	87	50.207	Pelodiscus_sinensis
ENSLACG00000007383	-	55	49.299	ENSPSIG00000000044	-	86	49.299	Pelodiscus_sinensis
ENSLACG00000007383	-	66	49.763	ENSPSIG00000000041	-	94	49.763	Pelodiscus_sinensis
ENSLACG00000007383	-	80	32.953	ENSPSIG00000001059	-	99	32.953	Pelodiscus_sinensis
ENSLACG00000007383	-	55	49.423	ENSPSIG00000001486	-	86	49.423	Pelodiscus_sinensis
ENSLACG00000007383	-	52	49.268	ENSPSIG00000016397	-	99	49.268	Pelodiscus_sinensis
ENSLACG00000007383	-	54	49.412	ENSPSIG00000000708	-	99	49.412	Pelodiscus_sinensis
ENSLACG00000007383	-	68	49.423	ENSPSIG00000001546	-	95	49.423	Pelodiscus_sinensis
ENSLACG00000007383	-	97	50.207	ENSPSIG00000000630	-	75	50.207	Pelodiscus_sinensis
ENSLACG00000007383	-	55	49.423	ENSPSIG00000001300	-	88	49.423	Pelodiscus_sinensis
ENSLACG00000007383	-	55	49.423	ENSPSIG00000000993	-	83	49.423	Pelodiscus_sinensis
ENSLACG00000007383	-	76	33.437	ENSPSIG00000001022	-	99	33.437	Pelodiscus_sinensis
ENSLACG00000007383	-	54	49.412	ENSPSIG00000001221	-	86	49.412	Pelodiscus_sinensis
ENSLACG00000007383	-	54	49.531	ENSPSIG00000001599	-	99	49.531	Pelodiscus_sinensis
ENSLACG00000007383	-	55	49.423	ENSPSIG00000001413	-	95	49.423	Pelodiscus_sinensis
ENSLACG00000007383	-	55	49.423	ENSPSIG00000001884	-	95	49.423	Pelodiscus_sinensis
ENSLACG00000007383	-	55	49.535	ENSPSIG00000001353	-	87	49.535	Pelodiscus_sinensis
ENSLACG00000007383	-	82	53.521	ENSPSIG00000000618	-	93	53.521	Pelodiscus_sinensis
ENSLACG00000007383	-	55	53.147	ENSPSIG00000015886	-	61	53.147	Pelodiscus_sinensis
ENSLACG00000007383	-	97	50.207	ENSPSIG00000000229	-	75	50.207	Pelodiscus_sinensis
ENSLACG00000007383	-	55	49.420	ENSPSIG00000001231	-	87	49.420	Pelodiscus_sinensis
ENSLACG00000007383	-	97	50.207	ENSPSIG00000001896	-	75	50.207	Pelodiscus_sinensis