EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000007417 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 54649 bases
Position: chrJH127730.1:274536-329184
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008376	HA2	PF04408.23	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008444	-	2328	-	ENSLACP00000008376	775 (aa)	-	H3AFF5

Gene Model

Click here to download ENSLACG00000007417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000007417	-	90	35.219	ENSLACG00000007225	DHX15	88	35.219

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007417	-	95	45.135	ENSG00000144045	DQX1	95	46.262	Homo_sapiens
ENSLACG00000007417	-	94	46.521	ENSAPOG00000005067	dqx1	93	46.728	Acanthochromis_polyacanthus
ENSLACG00000007417	-	95	44.655	ENSAMEG00000017193	DQX1	98	44.384	Ailuropoda_melanoleuca
ENSLACG00000007417	-	94	47.044	ENSAOCG00000020792	dqx1	93	47.258	Amphiprion_ocellaris
ENSLACG00000007417	-	94	47.644	ENSAPEG00000011785	dqx1	93	47.320	Amphiprion_percula
ENSLACG00000007417	-	94	45.169	ENSATEG00000009375	dqx1	93	45.649	Anabas_testudineus
ENSLACG00000007417	-	83	49.091	ENSACAG00000004745	DQX1	90	51.053	Anolis_carolinensis
ENSLACG00000007417	-	95	44.011	ENSANAG00000033980	DQX1	94	45.262	Aotus_nancymaae
ENSLACG00000007417	-	94	47.786	ENSACLG00000006845	dqx1	94	47.656	Astatotilapia_calliptera
ENSLACG00000007417	-	99	48.679	ENSAMXG00000009153	dqx1	95	49.146	Astyanax_mexicanus
ENSLACG00000007417	-	94	45.082	ENSBTAG00000016609	DQX1	95	45.686	Bos_taurus
ENSLACG00000007417	-	90	45.106	ENSCJAG00000017388	DQX1	94	45.106	Callithrix_jacchus
ENSLACG00000007417	-	95	45.196	ENSCAFG00000008425	DQX1	98	45.061	Canis_familiaris
ENSLACG00000007417	-	95	45.196	ENSCAFG00020014095	DQX1	98	45.061	Canis_lupus_dingo
ENSLACG00000007417	-	93	46.080	ENSCHIG00000019357	DQX1	95	46.535	Capra_hircus
ENSLACG00000007417	-	95	41.486	ENSTSYG00000001608	DQX1	95	42.172	Carlito_syrichta
ENSLACG00000007417	-	87	44.169	ENSCAPG00000000387	DQX1	94	44.200	Cavia_aperea
ENSLACG00000007417	-	96	45.007	ENSCPOG00000022849	DQX1	95	45.851	Cavia_porcellus
ENSLACG00000007417	-	90	45.957	ENSCCAG00000031484	DQX1	95	45.634	Cebus_capucinus
ENSLACG00000007417	-	91	45.686	ENSCATG00000037156	DQX1	95	45.686	Cercocebus_atys
ENSLACG00000007417	-	95	44.595	ENSCLAG00000007521	DQX1	95	45.480	Chinchilla_lanigera
ENSLACG00000007417	-	91	45.827	ENSCSAG00000015682	DQX1	95	45.827	Chlorocebus_sabaeus
ENSLACG00000007417	-	95	55.914	ENSCPBG00000024467	DQX1	91	56.757	Chrysemys_picta_bellii
ENSLACG00000007417	-	91	45.980	ENSCANG00000039725	DQX1	95	45.980	Colobus_angolensis_palliatus
ENSLACG00000007417	-	96	44.503	ENSCGRG00001011093	Dqx1	96	45.063	Cricetulus_griseus_chok1gshd
ENSLACG00000007417	-	96	44.503	ENSCGRG00000015486	Dqx1	96	45.063	Cricetulus_griseus_crigri
ENSLACG00000007417	-	79	48.430	ENSCSEG00000018927	dqx1	91	56.000	Cynoglossus_semilaevis
ENSLACG00000007417	-	94	46.966	ENSCVAG00000007365	dqx1	93	46.545	Cyprinodon_variegatus
ENSLACG00000007417	-	96	45.551	ENSDNOG00000019907	DQX1	95	46.479	Dasypus_novemcinctus
ENSLACG00000007417	-	90	46.439	ENSDORG00000013672	Dqx1	98	44.851	Dipodomys_ordii
ENSLACG00000007417	-	74	47.170	ENSETEG00000011890	DQX1	92	47.009	Echinops_telfairi
ENSLACG00000007417	-	94	36.387	ENSEBUG00000005072	DQX1	68	37.396	Eptatretus_burgeri
ENSLACG00000007417	-	91	45.493	ENSEASG00005010654	DQX1	96	45.493	Equus_asinus_asinus
ENSLACG00000007417	-	91	45.198	ENSECAG00000023896	DQX1	96	45.198	Equus_caballus
ENSLACG00000007417	-	98	48.148	ENSELUG00000015619	dqx1	95	48.721	Esox_lucius
ENSLACG00000007417	-	95	45.405	ENSFCAG00000028272	DQX1	98	45.061	Felis_catus
ENSLACG00000007417	-	91	53.662	ENSFALG00000010921	DQX1	93	53.492	Ficedula_albicollis
ENSLACG00000007417	-	96	44.562	ENSFDAG00000012179	DQX1	95	45.694	Fukomys_damarensis
ENSLACG00000007417	-	94	46.429	ENSGMOG00000008923	dqx1	97	46.527	Gadus_morhua
ENSLACG00000007417	-	95	54.398	ENSGALG00000033656	DQX1	96	54.398	Gallus_gallus
ENSLACG00000007417	-	94	47.484	ENSGAFG00000008279	dqx1	95	47.625	Gambusia_affinis
ENSLACG00000007417	-	94	46.364	ENSGACG00000018495	dqx1	97	47.397	Gasterosteus_aculeatus
ENSLACG00000007417	-	95	45.135	ENSGGOG00000006307	DQX1	95	46.262	Gorilla_gorilla
ENSLACG00000007417	-	94	47.917	ENSHBUG00000012890	dqx1	94	47.786	Haplochromis_burtoni
ENSLACG00000007417	-	96	42.857	ENSHGLG00000011994	DQX1	94	43.892	Heterocephalus_glaber_female
ENSLACG00000007417	-	96	42.857	ENSHGLG00100012005	DQX1	94	43.892	Heterocephalus_glaber_male
ENSLACG00000007417	-	96	45.157	ENSHCOG00000002562	dqx1	94	45.571	Hippocampus_comes
ENSLACG00000007417	-	99	48.424	ENSIPUG00000015152	DQX1	92	50.207	Ictalurus_punctatus
ENSLACG00000007417	-	91	46.535	ENSSTOG00000026252	DQX1	95	46.535	Ictidomys_tridecemlineatus
ENSLACG00000007417	-	95	44.265	ENSJJAG00000017070	Dqx1	96	45.035	Jaculus_jaculus
ENSLACG00000007417	-	94	47.043	ENSKMAG00000002776	dqx1	88	48.548	Kryptolebias_marmoratus
ENSLACG00000007417	-	94	47.530	ENSLBEG00000020503	dqx1	94	47.417	Labrus_bergylta
ENSLACG00000007417	-	53	61.353	ENSLOCG00000001140	dqx1	86	61.353	Lepisosteus_oculatus
ENSLACG00000007417	-	95	45.528	ENSLAFG00000018370	DQX1	95	46.535	Loxodonta_africana
ENSLACG00000007417	-	91	45.545	ENSMFAG00000001892	DQX1	95	45.545	Macaca_fascicularis
ENSLACG00000007417	-	91	45.545	ENSMMUG00000002129	DQX1	95	45.545	Macaca_mulatta
ENSLACG00000007417	-	91	45.686	ENSMNEG00000043354	DQX1	95	45.686	Macaca_nemestrina
ENSLACG00000007417	-	91	45.686	ENSMLEG00000028743	DQX1	95	45.686	Mandrillus_leucophaeus
ENSLACG00000007417	-	94	46.419	ENSMAMG00000022633	dqx1	93	46.105	Mastacembelus_armatus
ENSLACG00000007417	-	94	47.786	ENSMZEG00005002422	dqx1	94	47.656	Maylandia_zebra
ENSLACG00000007417	-	95	44.846	ENSMAUG00000022113	Dqx1	96	45.518	Mesocricetus_auratus
ENSLACG00000007417	-	95	45.270	ENSMICG00000006232	DQX1	98	45.135	Microcebus_murinus
ENSLACG00000007417	-	96	45.394	ENSMOCG00000017871	Dqx1	98	45.061	Microtus_ochrogaster
ENSLACG00000007417	-	94	46.736	ENSMMOG00000003933	dqx1	88	48.352	Mola_mola
ENSLACG00000007417	-	91	46.143	ENSMODG00000004879	DQX1	98	46.143	Monodelphis_domestica
ENSLACG00000007417	-	94	45.935	ENSMALG00000015132	dqx1	93	46.085	Monopterus_albus
ENSLACG00000007417	-	95	44.114	ENSMUSG00000009145	Dqx1	98	43.437	Mus_musculus
ENSLACG00000007417	-	95	44.280	ENSNGAG00000022609	Dqx1	94	44.901	Nannospalax_galili
ENSLACG00000007417	-	94	47.656	ENSNBRG00000004923	dqx1	94	47.526	Neolamprologus_brichardi
ENSLACG00000007417	-	95	44.549	ENSNLEG00000000771	DQX1	95	45.646	Nomascus_leucogenys
ENSLACG00000007417	-	78	44.426	ENSMEUG00000013231	DQX1	88	45.641	Notamacropus_eugenii
ENSLACG00000007417	-	97	44.914	ENSODEG00000012521	DQX1	95	46.338	Octodon_degus
ENSLACG00000007417	-	94	47.664	ENSONIG00000012572	dqx1	99	47.664	Oreochromis_niloticus
ENSLACG00000007417	-	94	42.453	ENSOCUG00000015372	DQX1	100	42.013	Oryctolagus_cuniculus
ENSLACG00000007417	-	94	47.458	ENSORLG00000014277	dqx1	94	47.204	Oryzias_latipes
ENSLACG00000007417	-	94	47.273	ENSORLG00020004148	dqx1	94	47.464	Oryzias_latipes_hni
ENSLACG00000007417	-	94	47.860	ENSORLG00015017580	dqx1	94	47.911	Oryzias_latipes_hsok
ENSLACG00000007417	-	94	47.601	ENSOMEG00000015481	dqx1	94	47.520	Oryzias_melastigma
ENSLACG00000007417	-	91	46.132	ENSOGAG00000001065	DQX1	98	44.879	Otolemur_garnettii
ENSLACG00000007417	-	93	46.080	ENSOARG00000012775	DQX1	94	46.535	Ovis_aries
ENSLACG00000007417	-	95	44.385	ENSPPAG00000034827	DQX1	95	45.467	Pan_paniscus
ENSLACG00000007417	-	95	45.405	ENSPPRG00000007947	DQX1	98	45.061	Panthera_pardus
ENSLACG00000007417	-	95	45.405	ENSPTIG00000016302	DQX1	98	45.061	Panthera_tigris_altaica
ENSLACG00000007417	-	95	45.135	ENSPTRG00000012096	DQX1	95	46.262	Pan_troglodytes
ENSLACG00000007417	-	91	45.827	ENSPANG00000014436	DQX1	95	45.827	Papio_anubis
ENSLACG00000007417	-	94	54.045	ENSPKIG00000016273	dqx1	90	49.931	Paramormyrops_kingsleyae
ENSLACG00000007417	-	96	44.622	ENSPEMG00000000695	Dqx1	94	45.892	Peromyscus_maniculatus_bairdii
ENSLACG00000007417	-	68	45.841	ENSPMAG00000000247	dqx1	100	44.981	Petromyzon_marinus
ENSLACG00000007417	-	90	47.167	ENSPCIG00000006057	DQX1	94	47.167	Phascolarctos_cinereus
ENSLACG00000007417	-	94	47.158	ENSPFOG00000006654	dqx1	95	46.607	Poecilia_formosa
ENSLACG00000007417	-	94	46.822	ENSPLAG00000019886	dqx1	95	46.831	Poecilia_latipinna
ENSLACG00000007417	-	93	46.710	ENSPMEG00000004991	dqx1	84	47.925	Poecilia_mexicana
ENSLACG00000007417	-	94	46.364	ENSPREG00000007179	dqx1	88	46.641	Poecilia_reticulata
ENSLACG00000007417	-	78	45.827	ENSPPYG00000012268	DQX1	92	47.241	Pongo_abelii
ENSLACG00000007417	-	74	56.180	ENSPCAG00000016943	DQX1	74	61.644	Procavia_capensis
ENSLACG00000007417	-	90	45.557	ENSPCOG00000021586	DQX1	95	45.493	Propithecus_coquereli
ENSLACG00000007417	-	90	45.403	ENSPVAG00000013964	DQX1	95	45.275	Pteropus_vampyrus
ENSLACG00000007417	-	94	47.786	ENSPNYG00000003028	dqx1	94	47.656	Pundamilia_nyererei
ENSLACG00000007417	-	99	49.000	ENSPNAG00000023120	dqx1	95	49.605	Pygocentrus_nattereri
ENSLACG00000007417	-	95	43.320	ENSRNOG00000008062	Dqx1	94	44.255	Rattus_norvegicus
ENSLACG00000007417	-	91	45.698	ENSRBIG00000041823	DQX1	95	45.698	Rhinopithecus_bieti
ENSLACG00000007417	-	91	45.698	ENSRROG00000039342	DQX1	95	45.698	Rhinopithecus_roxellana
ENSLACG00000007417	-	91	45.070	ENSSBOG00000028107	DQX1	95	45.070	Saimiri_boliviensis_boliviensis
ENSLACG00000007417	-	93	46.322	ENSSHAG00000016833	DQX1	94	50.509	Sarcophilus_harrisii
ENSLACG00000007417	-	98	46.086	ENSSFOG00015003817	dqx1	95	46.850	Scleropages_formosus
ENSLACG00000007417	-	94	45.161	ENSSMAG00000010612	dqx1	94	45.409	Scophthalmus_maximus
ENSLACG00000007417	-	94	45.605	ENSSDUG00000020759	dqx1	96	45.605	Seriola_dumerili
ENSLACG00000007417	-	94	45.732	ENSSLDG00000022712	dqx1	96	45.732	Seriola_lalandi_dorsalis
ENSLACG00000007417	-	94	48.095	ENSSPAG00000013343	dqx1	96	47.438	Stegastes_partitus
ENSLACG00000007417	-	91	46.676	ENSSSCG00000022614	DQX1	95	46.676	Sus_scrofa
ENSLACG00000007417	-	94	43.947	ENSTRUG00000012911	dqx1	80	60.855	Takifugu_rubripes
ENSLACG00000007417	-	70	46.520	ENSTBEG00000010252	DQX1	95	46.520	Tupaia_belangeri
ENSLACG00000007417	-	67	61.842	ENSTTRG00000012725	DQX1	68	67.164	Tursiops_truncatus
ENSLACG00000007417	-	95	45.405	ENSUAMG00000021690	DQX1	98	44.926	Ursus_americanus
ENSLACG00000007417	-	95	45.491	ENSUMAG00000001677	DQX1	98	45.013	Ursus_maritimus
ENSLACG00000007417	-	95	44.926	ENSVVUG00000004178	DQX1	99	44.790	Vulpes_vulpes
ENSLACG00000007417	-	94	47.712	ENSXMAG00000010692	dqx1	88	47.854	Xiphophorus_maculatus