EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000007516 (Gene tree)
Gene ID: 102345872
Gene Symbol: C1D
Alias: LRP1|Rrp47|SUN-CoR|SUNCOR
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 19723 bases
Position: chrJH127705.1:281783-301505
Accession: 102345872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008491	Sas10_Utp3	PF04000.15	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008559	C1D-201	4444	XM_006005126	ENSLACP00000008491	149 (aa)	XP_006005188	H3AFS0

Gene Model

Click here to download ENSLACG00000007516's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007516	C1D	83	80.645	ENSG00000197223	C1D	94	76.692	Homo_sapiens
ENSLACG00000007516	C1D	93	61.644	ENSAPOG00000005466	c1d	94	61.644	Acanthochromis_polyacanthus
ENSLACG00000007516	C1D	93	71.942	ENSAMEG00000004859	C1D	95	71.942	Ailuropoda_melanoleuca
ENSLACG00000007516	C1D	85	70.635	ENSACIG00000012684	c1d	83	68.992	Amphilophus_citrinellus
ENSLACG00000007516	C1D	93	61.224	ENSAOCG00000020354	c1d	95	61.224	Amphiprion_ocellaris
ENSLACG00000007516	C1D	93	60.274	ENSAPEG00000001403	c1d	95	60.274	Amphiprion_percula
ENSLACG00000007516	C1D	93	63.014	ENSATEG00000012922	c1d	94	63.014	Anabas_testudineus
ENSLACG00000007516	C1D	96	72.028	ENSAPLG00000009320	C1D	99	72.028	Anas_platyrhynchos
ENSLACG00000007516	C1D	81	79.339	ENSACAG00000001337	C1D	99	79.339	Anolis_carolinensis
ENSLACG00000007516	C1D	83	75.806	ENSANAG00000005773	-	94	72.180	Aotus_nancymaae
ENSLACG00000007516	C1D	83	79.032	ENSANAG00000035972	-	94	75.188	Aotus_nancymaae
ENSLACG00000007516	C1D	79	69.231	ENSACLG00000026206	c1d	95	61.972	Astatotilapia_calliptera
ENSLACG00000007516	C1D	98	62.329	ENSAMXG00000043212	c1d	97	62.329	Astyanax_mexicanus
ENSLACG00000007516	C1D	89	76.515	ENSBTAG00000049002	C1D	100	72.535	Bos_taurus
ENSLACG00000007516	C1D	95	73.239	ENSCJAG00000006589	C1D	93	73.239	Callithrix_jacchus
ENSLACG00000007516	C1D	70	76.923	ENSCJAG00000044668	-	73	77.660	Callithrix_jacchus
ENSLACG00000007516	C1D	89	75.373	ENSCAFG00000030099	C1D	95	75.373	Canis_familiaris
ENSLACG00000007516	C1D	89	75.373	ENSCAFG00020026997	C1D	95	75.373	Canis_lupus_dingo
ENSLACG00000007516	C1D	85	78.740	ENSCHIG00000025729	C1D	89	78.740	Capra_hircus
ENSLACG00000007516	C1D	74	77.273	ENSTSYG00000026573	-	70	77.273	Carlito_syrichta
ENSLACG00000007516	C1D	89	73.881	ENSTSYG00000035739	-	95	73.881	Carlito_syrichta
ENSLACG00000007516	C1D	77	66.667	ENSCAPG00000011523	-	84	65.686	Cavia_aperea
ENSLACG00000007516	C1D	80	80.672	ENSCPOG00000037986	-	84	80.672	Cavia_porcellus
ENSLACG00000007516	C1D	77	67.544	ENSCPOG00000020112	-	84	66.667	Cavia_porcellus
ENSLACG00000007516	C1D	83	79.839	ENSCCAG00000030405	-	94	75.940	Cebus_capucinus
ENSLACG00000007516	C1D	89	74.436	ENSCATG00000043348	-	94	74.436	Cercocebus_atys
ENSLACG00000007516	C1D	83	79.839	ENSCATG00000045336	C1D	94	75.940	Cercocebus_atys
ENSLACG00000007516	C1D	85	79.528	ENSCLAG00000011883	C1D	89	79.528	Chinchilla_lanigera
ENSLACG00000007516	C1D	89	75.188	ENSCSAG00000014811	C1D	94	75.188	Chlorocebus_sabaeus
ENSLACG00000007516	C1D	83	79.032	ENSCHOG00000006719	C1D	69	79.032	Choloepus_hoffmanni
ENSLACG00000007516	C1D	97	71.724	ENSCPBG00000014451	C1D	98	71.724	Chrysemys_picta_bellii
ENSLACG00000007516	C1D	78	50.000	ENSCING00000020906	-	73	45.324	Ciona_intestinalis
ENSLACG00000007516	C1D	79	49.573	ENSCSAVG00000000150	-	67	49.573	Ciona_savignyi
ENSLACG00000007516	C1D	78	72.414	ENSCANG00000036599	-	94	72.414	Colobus_angolensis_palliatus
ENSLACG00000007516	C1D	83	79.839	ENSCANG00000035564	C1D	94	75.940	Colobus_angolensis_palliatus
ENSLACG00000007516	C1D	80	82.353	ENSCGRG00001023376	C1d	84	82.353	Cricetulus_griseus_chok1gshd
ENSLACG00000007516	C1D	80	82.353	ENSCGRG00000010245	C1d	84	82.353	Cricetulus_griseus_crigri
ENSLACG00000007516	C1D	86	65.625	ENSCSEG00000000587	c1d	90	65.625	Cynoglossus_semilaevis
ENSLACG00000007516	C1D	94	58.667	ENSCVAG00000004603	c1d	97	59.184	Cyprinodon_variegatus
ENSLACG00000007516	C1D	83	70.161	ENSDARG00000021112	c1d	98	61.905	Danio_rerio
ENSLACG00000007516	C1D	89	67.164	ENSDNOG00000046068	-	94	67.669	Dasypus_novemcinctus
ENSLACG00000007516	C1D	89	73.881	ENSDORG00000003300	C1d	94	74.436	Dipodomys_ordii
ENSLACG00000007516	C1D	57	81.176	ENSETEG00000014857	C1D	89	81.176	Echinops_telfairi
ENSLACG00000007516	C1D	83	59.677	ENSEBUG00000006874	c1d	78	59.677	Eptatretus_burgeri
ENSLACG00000007516	C1D	89	74.627	ENSEASG00005007307	C1D	87	74.627	Equus_asinus_asinus
ENSLACG00000007516	C1D	89	76.515	ENSECAG00000002187	C1D	89	79.032	Equus_caballus
ENSLACG00000007516	C1D	85	69.048	ENSELUG00000014823	c1d	89	67.424	Esox_lucius
ENSLACG00000007516	C1D	89	74.627	ENSFCAG00000028933	C1D	95	74.627	Felis_catus
ENSLACG00000007516	C1D	90	77.612	ENSFALG00000013640	C1D	81	77.612	Ficedula_albicollis
ENSLACG00000007516	C1D	89	57.463	ENSFDAG00000014175	-	93	57.463	Fukomys_damarensis
ENSLACG00000007516	C1D	83	78.226	ENSFDAG00000010462	-	94	74.436	Fukomys_damarensis
ENSLACG00000007516	C1D	96	65.035	ENSFHEG00000010545	c1d	98	65.035	Fundulus_heteroclitus
ENSLACG00000007516	C1D	81	65.289	ENSGMOG00000013911	-	96	65.289	Gadus_morhua
ENSLACG00000007516	C1D	95	74.468	ENSGALG00000008765	C1D	97	74.468	Gallus_gallus
ENSLACG00000007516	C1D	84	68.000	ENSGAFG00000012578	c1d	80	68.000	Gambusia_affinis
ENSLACG00000007516	C1D	79	71.186	ENSGACG00000011981	c1d	92	71.186	Gasterosteus_aculeatus
ENSLACG00000007516	C1D	87	78.295	ENSGAGG00000013383	C1D	98	71.724	Gopherus_agassizii
ENSLACG00000007516	C1D	86	75.000	ENSGGOG00000025808	-	74	75.000	Gorilla_gorilla
ENSLACG00000007516	C1D	82	78.689	ENSGGOG00000022296	-	93	74.809	Gorilla_gorilla
ENSLACG00000007516	C1D	83	79.839	ENSGGOG00000025982	-	69	79.839	Gorilla_gorilla
ENSLACG00000007516	C1D	78	70.690	ENSHBUG00000018531	c1d	84	63.121	Haplochromis_burtoni
ENSLACG00000007516	C1D	83	70.161	ENSHGLG00000021219	-	88	70.161	Heterocephalus_glaber_female
ENSLACG00000007516	C1D	80	82.353	ENSHGLG00000012332	-	84	82.353	Heterocephalus_glaber_female
ENSLACG00000007516	C1D	83	70.968	ENSHGLG00100019951	-	88	70.968	Heterocephalus_glaber_male
ENSLACG00000007516	C1D	80	82.353	ENSHGLG00100000221	-	84	82.353	Heterocephalus_glaber_male
ENSLACG00000007516	C1D	92	59.028	ENSHCOG00000014589	c1d	98	59.028	Hippocampus_comes
ENSLACG00000007516	C1D	92	59.028	ENSHCOG00000014568	C1D	98	59.028	Hippocampus_comes
ENSLACG00000007516	C1D	97	60.690	ENSIPUG00000018661	c1d	99	60.690	Ictalurus_punctatus
ENSLACG00000007516	C1D	89	77.273	ENSSTOG00000012346	C1D	93	77.273	Ictidomys_tridecemlineatus
ENSLACG00000007516	C1D	89	71.212	ENSJJAG00000009540	-	95	71.212	Jaculus_jaculus
ENSLACG00000007516	C1D	79	70.492	ENSJJAG00000023186	-	93	70.492	Jaculus_jaculus
ENSLACG00000007516	C1D	83	73.171	ENSJJAG00000005044	-	89	73.171	Jaculus_jaculus
ENSLACG00000007516	C1D	83	65.854	ENSJJAG00000016086	-	88	65.854	Jaculus_jaculus
ENSLACG00000007516	C1D	98	60.959	ENSKMAG00000015077	c1d	100	61.935	Kryptolebias_marmoratus
ENSLACG00000007516	C1D	95	61.438	ENSLBEG00000008351	c1d	99	61.438	Labrus_bergylta
ENSLACG00000007516	C1D	97	69.444	ENSLOCG00000016024	c1d	99	68.493	Lepisosteus_oculatus
ENSLACG00000007516	C1D	80	80.672	ENSLAFG00000002083	C1D	95	73.881	Loxodonta_africana
ENSLACG00000007516	C1D	83	79.839	ENSMFAG00000034261	C1D	94	75.940	Macaca_fascicularis
ENSLACG00000007516	C1D	89	73.684	ENSMFAG00000034034	-	94	73.684	Macaca_fascicularis
ENSLACG00000007516	C1D	83	78.226	ENSMFAG00000028681	-	94	74.436	Macaca_fascicularis
ENSLACG00000007516	C1D	83	79.839	ENSMMUG00000041557	C1D	89	79.839	Macaca_mulatta
ENSLACG00000007516	C1D	83	76.613	ENSMMUG00000043184	-	94	72.932	Macaca_mulatta
ENSLACG00000007516	C1D	83	77.419	ENSMMUG00000017209	-	94	73.684	Macaca_mulatta
ENSLACG00000007516	C1D	89	73.684	ENSMNEG00000020626	-	94	73.684	Macaca_nemestrina
ENSLACG00000007516	C1D	83	79.839	ENSMNEG00000040612	C1D	94	75.940	Macaca_nemestrina
ENSLACG00000007516	C1D	83	79.839	ENSMLEG00000027619	C1D	94	75.940	Mandrillus_leucophaeus
ENSLACG00000007516	C1D	89	74.436	ENSMLEG00000028412	-	94	74.436	Mandrillus_leucophaeus
ENSLACG00000007516	C1D	79	71.795	ENSMAMG00000022156	c1d	95	63.514	Mastacembelus_armatus
ENSLACG00000007516	C1D	78	70.690	ENSMZEG00005027343	c1d	97	63.121	Maylandia_zebra
ENSLACG00000007516	C1D	90	79.104	ENSMGAG00000004517	C1D	99	75.177	Meleagris_gallopavo
ENSLACG00000007516	C1D	80	82.353	ENSMAUG00000008974	C1d	84	82.353	Mesocricetus_auratus
ENSLACG00000007516	C1D	80	81.513	ENSMICG00000032141	C1D	84	81.513	Microcebus_murinus
ENSLACG00000007516	C1D	85	80.315	ENSMOCG00000010860	C1d	89	80.315	Microtus_ochrogaster
ENSLACG00000007516	C1D	85	69.291	ENSMMOG00000007332	c1d	82	69.291	Mola_mola
ENSLACG00000007516	C1D	91	80.741	ENSMODG00000003561	C1D	95	80.741	Monodelphis_domestica
ENSLACG00000007516	C1D	93	64.493	ENSMALG00000020864	c1d	95	68.293	Monopterus_albus
ENSLACG00000007516	C1D	81	79.339	MGP_CAROLIEiJ_G0016110	C1d	94	80.180	Mus_caroli
ENSLACG00000007516	C1D	81	79.339	ENSMUSG00000000581	C1d	94	80.180	Mus_musculus
ENSLACG00000007516	C1D	81	80.165	MGP_PahariEiJ_G0016781	C1d	94	81.081	Mus_pahari
ENSLACG00000007516	C1D	81	79.339	MGP_SPRETEiJ_G0016952	C1d	94	80.180	Mus_spretus
ENSLACG00000007516	C1D	89	75.373	ENSMPUG00000006224	C1D	95	75.373	Mustela_putorius_furo
ENSLACG00000007516	C1D	95	73.239	ENSMLUG00000024947	-	100	73.239	Myotis_lucifugus
ENSLACG00000007516	C1D	95	74.648	ENSMLUG00000010791	-	100	74.648	Myotis_lucifugus
ENSLACG00000007516	C1D	95	72.535	ENSMLUG00000029990	-	100	72.535	Myotis_lucifugus
ENSLACG00000007516	C1D	80	78.992	ENSNGAG00000011872	-	87	76.423	Nannospalax_galili
ENSLACG00000007516	C1D	80	73.109	ENSNGAG00000016675	-	84	73.109	Nannospalax_galili
ENSLACG00000007516	C1D	74	73.874	ENSNGAG00000012482	-	88	73.874	Nannospalax_galili
ENSLACG00000007516	C1D	78	71.552	ENSNBRG00000010704	c1d	97	63.830	Neolamprologus_brichardi
ENSLACG00000007516	C1D	83	79.032	ENSNLEG00000032919	-	69	79.032	Nomascus_leucogenys
ENSLACG00000007516	C1D	85	77.165	ENSOPRG00000009586	C1D	90	77.165	Ochotona_princeps
ENSLACG00000007516	C1D	85	70.079	ENSODEG00000018525	-	89	70.079	Octodon_degus
ENSLACG00000007516	C1D	83	78.226	ENSODEG00000018885	-	89	78.226	Octodon_degus
ENSLACG00000007516	C1D	83	78.226	ENSODEG00000011242	-	88	78.226	Octodon_degus
ENSLACG00000007516	C1D	98	63.699	ENSONIG00000001233	c1d	97	63.699	Oreochromis_niloticus
ENSLACG00000007516	C1D	64	88.421	ENSOANG00000008385	C1D	94	85.577	Ornithorhynchus_anatinus
ENSLACG00000007516	C1D	83	79.839	ENSOCUG00000025587	-	88	79.839	Oryctolagus_cuniculus
ENSLACG00000007516	C1D	83	79.839	ENSOCUG00000009771	-	88	79.839	Oryctolagus_cuniculus
ENSLACG00000007516	C1D	82	69.672	ENSORLG00000021968	c1d	78	69.672	Oryzias_latipes
ENSLACG00000007516	C1D	94	63.571	ENSORLG00020000507	c1d	88	63.571	Oryzias_latipes_hni
ENSLACG00000007516	C1D	85	68.254	ENSORLG00015004594	c1d	80	68.254	Oryzias_latipes_hsok
ENSLACG00000007516	C1D	82	71.311	ENSOMEG00000004672	c1d	78	71.311	Oryzias_melastigma
ENSLACG00000007516	C1D	80	79.832	ENSOGAG00000027934	-	84	79.832	Otolemur_garnettii
ENSLACG00000007516	C1D	85	78.740	ENSOARG00000019931	C1D	89	78.740	Ovis_aries
ENSLACG00000007516	C1D	86	75.000	ENSPPAG00000040091	-	74	75.000	Pan_paniscus
ENSLACG00000007516	C1D	83	79.839	ENSPPAG00000037847	-	94	75.940	Pan_paniscus
ENSLACG00000007516	C1D	83	50.806	ENSPPRG00000022830	-	85	50.806	Panthera_pardus
ENSLACG00000007516	C1D	89	74.627	ENSPPRG00000017045	-	95	74.627	Panthera_pardus
ENSLACG00000007516	C1D	89	74.627	ENSPTIG00000009414	C1D	95	74.627	Panthera_tigris_altaica
ENSLACG00000007516	C1D	83	79.839	ENSPTRG00000023558	C1D	94	75.940	Pan_troglodytes
ENSLACG00000007516	C1D	83	79.839	ENSPANG00000002886	C1D	69	79.839	Papio_anubis
ENSLACG00000007516	C1D	89	74.436	ENSPANG00000000501	-	94	74.436	Papio_anubis
ENSLACG00000007516	C1D	97	63.194	ENSPKIG00000004877	c1d	97	63.194	Paramormyrops_kingsleyae
ENSLACG00000007516	C1D	94	73.239	ENSPSIG00000010015	C1D	98	73.239	Pelodiscus_sinensis
ENSLACG00000007516	C1D	83	70.732	ENSPMGG00000009326	c1d	86	66.165	Periophthalmus_magnuspinnatus
ENSLACG00000007516	C1D	91	80.000	ENSPCIG00000018629	-	95	80.000	Phascolarctos_cinereus
ENSLACG00000007516	C1D	91	73.333	ENSPCIG00000006831	-	93	73.333	Phascolarctos_cinereus
ENSLACG00000007516	C1D	85	71.429	ENSPFOG00000003686	c1d	100	61.935	Poecilia_formosa
ENSLACG00000007516	C1D	85	71.429	ENSPLAG00000000228	c1d	100	61.935	Poecilia_latipinna
ENSLACG00000007516	C1D	85	71.429	ENSPMEG00000023213	c1d	100	61.935	Poecilia_mexicana
ENSLACG00000007516	C1D	83	71.545	ENSPREG00000000742	c1d	99	61.842	Poecilia_reticulata
ENSLACG00000007516	C1D	83	75.000	ENSPPYG00000002294	-	88	75.000	Pongo_abelii
ENSLACG00000007516	C1D	83	79.839	ENSPPYG00000012354	C1D	73	75.940	Pongo_abelii
ENSLACG00000007516	C1D	83	67.742	ENSPCAG00000010088	C1D	69	67.742	Procavia_capensis
ENSLACG00000007516	C1D	80	81.513	ENSPCOG00000016112	C1D	84	81.513	Propithecus_coquereli
ENSLACG00000007516	C1D	83	79.032	ENSPVAG00000012692	C1D	69	79.032	Pteropus_vampyrus
ENSLACG00000007516	C1D	82	67.213	ENSPNYG00000008789	c1d	97	63.121	Pundamilia_nyererei
ENSLACG00000007516	C1D	98	66.438	ENSPNAG00000004219	c1d	97	66.438	Pygocentrus_nattereri
ENSLACG00000007516	C1D	80	80.672	ENSRNOG00000005982	C1d	84	80.672	Rattus_norvegicus
ENSLACG00000007516	C1D	83	78.226	ENSRBIG00000026211	-	88	78.226	Rhinopithecus_bieti
ENSLACG00000007516	C1D	83	79.839	ENSRROG00000029013	C1D	94	75.940	Rhinopithecus_roxellana
ENSLACG00000007516	C1D	83	78.226	ENSRROG00000005944	-	88	78.226	Rhinopithecus_roxellana
ENSLACG00000007516	C1D	83	79.839	ENSSBOG00000025275	C1D	94	75.940	Saimiri_boliviensis_boliviensis
ENSLACG00000007516	C1D	91	79.259	ENSSHAG00000008352	C1D	65	79.259	Sarcophilus_harrisii
ENSLACG00000007516	C1D	87	67.692	ENSSFOG00015010861	c1d	92	67.692	Scleropages_formosus
ENSLACG00000007516	C1D	87	66.923	ENSSMAG00000019230	c1d	85	65.909	Scophthalmus_maximus
ENSLACG00000007516	C1D	93	66.197	ENSSDUG00000020213	c1d	92	66.197	Seriola_dumerili
ENSLACG00000007516	C1D	93	66.197	ENSSLDG00000017371	c1d	92	66.197	Seriola_lalandi_dorsalis
ENSLACG00000007516	C1D	89	78.788	ENSSPUG00000006525	C1D	99	73.793	Sphenodon_punctatus
ENSLACG00000007516	C1D	93	63.265	ENSSPAG00000008574	c1d	95	61.224	Stegastes_partitus
ENSLACG00000007516	C1D	83	78.226	ENSSSCG00000039331	-	95	73.881	Sus_scrofa
ENSLACG00000007516	C1D	71	68.868	ENSSSCG00000035701	-	78	69.149	Sus_scrofa
ENSLACG00000007516	C1D	95	74.306	ENSTGUG00000002367	C1D	100	74.306	Taeniopygia_guttata
ENSLACG00000007516	C1D	79	69.492	ENSTRUG00000012245	c1d	83	62.044	Takifugu_rubripes
ENSLACG00000007516	C1D	82	67.213	ENSTNIG00000009827	c1d	89	62.879	Tetraodon_nigroviridis
ENSLACG00000007516	C1D	91	74.815	ENSTBEG00000009797	C1D	94	74.815	Tupaia_belangeri
ENSLACG00000007516	C1D	83	78.226	ENSTTRG00000013982	C1D	71	78.226	Tursiops_truncatus
ENSLACG00000007516	C1D	83	64.567	ENSUAMG00000025246	C1D	95	61.314	Ursus_americanus
ENSLACG00000007516	C1D	89	74.627	ENSUMAG00000021118	-	95	74.627	Ursus_maritimus
ENSLACG00000007516	C1D	63	64.948	ENSUMAG00000006451	-	76	64.948	Ursus_maritimus
ENSLACG00000007516	C1D	83	77.419	ENSVPAG00000012080	C1D	70	77.419	Vicugna_pacos
ENSLACG00000007516	C1D	83	79.839	ENSVVUG00000027629	C1D	78	79.839	Vulpes_vulpes
ENSLACG00000007516	C1D	97	69.444	ENSXETG00000025934	c1d	99	69.444	Xenopus_tropicalis
ENSLACG00000007516	C1D	82	69.672	ENSXCOG00000013813	c1d	88	63.768	Xiphophorus_couchianus
ENSLACG00000007516	C1D	82	68.852	ENSXMAG00000022273	c1d	88	63.043	Xiphophorus_maculatus