EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000007672 (Gene tree)
Gene ID: 102361105
Gene Symbol: rps27a
Alias: hm:zeh0386|ik:tdsubc_1f2|tdsubc_1f2|xx:tdsubc_1f2|zgc:66168
Full Name: ribosomal protein S27a
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 11696 bases
Position: chrJH127271.1:287361-299056
Accession: 102361105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008678	Ribosomal_S27	PF01599.19	8.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008746	-	4839	XM_006001537	ENSLACP00000008678	156 (aa)	XP_006001599	H3AGA7

Gene Model

Click here to download ENSLACG00000007672's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007672	rps27a	100	98.077	ENSAPOG00000022780	rps27a	100	98.077	Acanthochromis_polyacanthus
ENSLACG00000007672	rps27a	100	98.077	ENSAOCG00000000282	rps27a	100	98.077	Amphiprion_ocellaris
ENSLACG00000007672	rps27a	100	98.077	ENSAPEG00000010300	rps27a	100	98.077	Amphiprion_percula
ENSLACG00000007672	rps27a	100	97.436	ENSATEG00000021507	rps27a	100	97.436	Anabas_testudineus
ENSLACG00000007672	rps27a	100	98.077	ENSAMXG00000040689	rps27a	100	98.077	Astyanax_mexicanus
ENSLACG00000007672	rps27a	76	99.153	ENSCJAG00000046243	-	100	99.153	Callithrix_jacchus
ENSLACG00000007672	rps27a	100	98.718	ENSTSYG00000000845	-	100	98.718	Carlito_syrichta
ENSLACG00000007672	rps27a	100	89.103	ENSCING00000005834	r27a	100	89.103	Ciona_intestinalis
ENSLACG00000007672	rps27a	99	81.169	ENSCSAVG00000001323	-	95	81.169	Ciona_savignyi
ENSLACG00000007672	rps27a	100	77.564	ENSCGRG00001008358	-	100	76.923	Cricetulus_griseus_chok1gshd
ENSLACG00000007672	rps27a	100	98.077	ENSCSEG00000001603	rps27a	100	98.077	Cynoglossus_semilaevis
ENSLACG00000007672	rps27a	100	98.077	ENSCVAG00000004811	rps27a	86	98.077	Cyprinodon_variegatus
ENSLACG00000007672	rps27a	100	98.077	ENSDARG00000032725	rps27a	100	98.077	Danio_rerio
ENSLACG00000007672	rps27a	100	92.949	FBgn0003942	RpS27A	100	92.949	Drosophila_melanogaster
ENSLACG00000007672	rps27a	100	94.872	ENSEBUG00000007396	rps27a	100	94.872	Eptatretus_burgeri
ENSLACG00000007672	rps27a	100	98.077	ENSELUG00000004527	rps27a	100	98.077	Esox_lucius
ENSLACG00000007672	rps27a	100	98.077	ENSFHEG00000001180	rps27a	100	98.077	Fundulus_heteroclitus
ENSLACG00000007672	rps27a	100	98.077	ENSGMOG00000011896	rps27a	91	98.077	Gadus_morhua
ENSLACG00000007672	rps27a	100	98.077	ENSGAFG00000014202	rps27a	100	98.077	Gambusia_affinis
ENSLACG00000007672	rps27a	100	98.077	ENSGACG00000011558	rps27a	100	98.077	Gasterosteus_aculeatus
ENSLACG00000007672	rps27a	100	98.077	ENSHBUG00000003375	rps27a	100	98.077	Haplochromis_burtoni
ENSLACG00000007672	rps27a	100	98.077	ENSHCOG00000019712	rps27a	100	98.077	Hippocampus_comes
ENSLACG00000007672	rps27a	100	98.077	ENSIPUG00000015317	rps27a	100	98.077	Ictalurus_punctatus
ENSLACG00000007672	rps27a	100	98.077	ENSKMAG00000003156	rps27a	100	98.077	Kryptolebias_marmoratus
ENSLACG00000007672	rps27a	100	98.077	ENSLBEG00000000541	rps27a	100	98.077	Labrus_bergylta
ENSLACG00000007672	rps27a	100	98.077	ENSLOCG00000015551	rps27a	96	98.077	Lepisosteus_oculatus
ENSLACG00000007672	rps27a	100	96.795	ENSMNEG00000026442	-	100	96.795	Macaca_nemestrina
ENSLACG00000007672	rps27a	88	98.551	ENSMLEG00000003375	-	100	98.551	Mandrillus_leucophaeus
ENSLACG00000007672	rps27a	100	98.077	ENSMAMG00000022556	rps27a	100	98.077	Mastacembelus_armatus
ENSLACG00000007672	rps27a	100	98.077	ENSMZEG00005004484	rps27a	100	98.077	Maylandia_zebra
ENSLACG00000007672	rps27a	100	97.436	ENSMMOG00000007733	rps27a	100	97.436	Mola_mola
ENSLACG00000007672	rps27a	100	98.077	ENSMALG00000014759	rps27a	100	98.077	Monopterus_albus
ENSLACG00000007672	rps27a	100	98.077	ENSNBRG00000010708	rps27a	100	98.077	Neolamprologus_brichardi
ENSLACG00000007672	rps27a	100	98.077	ENSONIG00000016075	rps27a	96	98.077	Oreochromis_niloticus
ENSLACG00000007672	rps27a	100	97.436	ENSORLG00000029546	rps27a	100	97.436	Oryzias_latipes
ENSLACG00000007672	rps27a	100	84.444	ENSORLG00020017665	-	100	84.444	Oryzias_latipes_hni
ENSLACG00000007672	rps27a	100	97.436	ENSORLG00015003772	rps27a	100	97.436	Oryzias_latipes_hsok
ENSLACG00000007672	rps27a	100	97.436	ENSOMEG00000022866	rps27a	100	97.436	Oryzias_melastigma
ENSLACG00000007672	rps27a	92	88.889	ENSOGAG00000029795	-	92	88.194	Otolemur_garnettii
ENSLACG00000007672	rps27a	100	94.872	ENSOARG00000014935	-	91	93.590	Ovis_aries
ENSLACG00000007672	rps27a	100	96.154	ENSPPAG00000023609	-	100	96.154	Pan_paniscus
ENSLACG00000007672	rps27a	100	97.436	ENSPTRG00000023227	-	100	97.436	Pan_troglodytes
ENSLACG00000007672	rps27a	100	98.718	ENSPKIG00000021492	rps27a	100	98.718	Paramormyrops_kingsleyae
ENSLACG00000007672	rps27a	78	95.082	ENSPMAG00000006335	-	100	95.082	Petromyzon_marinus
ENSLACG00000007672	rps27a	100	98.077	ENSPFOG00000013152	rps27a	100	98.077	Poecilia_formosa
ENSLACG00000007672	rps27a	100	98.077	ENSPLAG00000012639	rps27a	100	98.077	Poecilia_latipinna
ENSLACG00000007672	rps27a	100	98.077	ENSPMEG00000015419	rps27a	100	98.077	Poecilia_mexicana
ENSLACG00000007672	rps27a	100	98.077	ENSPREG00000012478	rps27a	100	98.077	Poecilia_reticulata
ENSLACG00000007672	rps27a	97	96.689	ENSPVAG00000016471	-	100	96.689	Pteropus_vampyrus
ENSLACG00000007672	rps27a	100	98.077	ENSPNYG00000019989	rps27a	100	98.077	Pundamilia_nyererei
ENSLACG00000007672	rps27a	100	98.077	ENSPNAG00000002903	rps27a	100	98.077	Pygocentrus_nattereri
ENSLACG00000007672	rps27a	97	82.781	YLR167W	RPS31	99	82.781	Saccharomyces_cerevisiae
ENSLACG00000007672	rps27a	99	97.419	ENSSFOG00015017733	rps27a	88	97.419	Scleropages_formosus
ENSLACG00000007672	rps27a	100	98.077	ENSSMAG00000004941	rps27a	100	98.077	Scophthalmus_maximus
ENSLACG00000007672	rps27a	100	98.077	ENSSDUG00000003170	rps27a	100	98.077	Seriola_dumerili
ENSLACG00000007672	rps27a	99	84.416	ENSSLDG00000001310	-	99	84.416	Seriola_lalandi_dorsalis
ENSLACG00000007672	rps27a	100	98.077	ENSSPAG00000022744	rps27a	100	98.077	Stegastes_partitus
ENSLACG00000007672	rps27a	100	98.077	ENSTRUG00000010963	rps27a	100	98.077	Takifugu_rubripes
ENSLACG00000007672	rps27a	90	96.429	ENSTNIG00000018689	rps27a	100	96.429	Tetraodon_nigroviridis
ENSLACG00000007672	rps27a	100	98.077	ENSXCOG00000003780	rps27a	100	98.077	Xiphophorus_couchianus
ENSLACG00000007672	rps27a	100	98.077	ENSXMAG00000000171	rps27a	100	98.077	Xiphophorus_maculatus