EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000007830 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2335 bases
Position: chrJH127085.1:301668-304002
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000008866	RVT_1	PF00078.27	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000008934	-	948	-	ENSLACP00000008865	316 (aa)	-	H3AGU4
ENSLACT00000008935	-	2103	-	ENSLACP00000008866	701 (aa)	-	H3AGU5

Gene Model

Click here to download ENSLACG00000007830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000007830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000007830	-	60	34.031	ENSLACG00000008366	-	65	34.031
ENSLACG00000007830	-	79	41.016	ENSLACG00000007522	-	88	41.016
ENSLACG00000007830	-	70	31.930	ENSLACG00000011272	-	70	31.930
ENSLACG00000007830	-	100	82.186	ENSLACG00000003991	-	85	82.186
ENSLACG00000007830	-	62	31.771	ENSLACG00000002665	-	60	31.771
ENSLACG00000007830	-	63	30.986	ENSLACG00000015558	-	68	30.986
ENSLACG00000007830	-	68	36.239	ENSLACG00000018782	-	65	36.239
ENSLACG00000007830	-	64	37.342	ENSLACG00000011297	-	59	37.342
ENSLACG00000007830	-	100	35.792	ENSLACG00000016441	-	99	35.792
ENSLACG00000007830	-	55	36.327	ENSLACG00000009347	-	65	36.327
ENSLACG00000007830	-	58	37.615	ENSLACG00000016980	-	54	37.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000007830	-	89	42.331	ENSATEG00000018698	-	59	42.331	Anabas_testudineus
ENSLACG00000007830	-	92	36.592	ENSATEG00000016298	-	65	36.592	Anabas_testudineus
ENSLACG00000007830	-	92	32.806	ENSACLG00000013947	-	71	32.806	Astatotilapia_calliptera
ENSLACG00000007830	-	83	33.025	ENSACLG00000017258	-	64	33.025	Astatotilapia_calliptera
ENSLACG00000007830	-	94	31.386	ENSACLG00000024556	-	88	31.386	Astatotilapia_calliptera
ENSLACG00000007830	-	80	31.481	ENSACLG00000021355	-	74	31.481	Astatotilapia_calliptera
ENSLACG00000007830	-	89	34.670	ENSACLG00000012657	-	59	34.670	Astatotilapia_calliptera
ENSLACG00000007830	-	100	33.504	ENSACLG00000027627	-	65	33.504	Astatotilapia_calliptera
ENSLACG00000007830	-	89	34.670	ENSACLG00000000373	-	59	34.670	Astatotilapia_calliptera
ENSLACG00000007830	-	100	54.868	ENSACLG00000016581	-	67	54.868	Astatotilapia_calliptera
ENSLACG00000007830	-	87	31.790	ENSACLG00000019989	-	70	31.790	Astatotilapia_calliptera
ENSLACG00000007830	-	85	33.048	ENSACLG00000010542	-	50	33.048	Astatotilapia_calliptera
ENSLACG00000007830	-	94	38.938	ENSACLG00000015880	-	53	38.938	Astatotilapia_calliptera
ENSLACG00000007830	-	84	30.986	ENSACLG00000008010	-	57	30.986	Astatotilapia_calliptera
ENSLACG00000007830	-	99	32.031	ENSACLG00000014688	-	64	32.031	Astatotilapia_calliptera
ENSLACG00000007830	-	82	37.963	ENSAMXG00000041114	-	67	37.963	Astyanax_mexicanus
ENSLACG00000007830	-	100	30.788	ENSAMXG00000038531	-	58	30.788	Astyanax_mexicanus
ENSLACG00000007830	-	77	38.245	ENSAMXG00000041896	-	82	38.245	Astyanax_mexicanus
ENSLACG00000007830	-	61	32.951	ENSAMXG00000038480	-	67	32.951	Astyanax_mexicanus
ENSLACG00000007830	-	85	33.429	ENSAMXG00000041369	-	56	33.429	Astyanax_mexicanus
ENSLACG00000007830	-	90	32.225	ENSAMXG00000037864	-	59	32.225	Astyanax_mexicanus
ENSLACG00000007830	-	85	33.621	ENSAMXG00000036113	-	60	33.621	Astyanax_mexicanus
ENSLACG00000007830	-	69	31.653	ENSAMXG00000043821	-	73	31.653	Astyanax_mexicanus
ENSLACG00000007830	-	100	40.537	ENSAMXG00000029230	-	50	40.537	Astyanax_mexicanus
ENSLACG00000007830	-	78	37.855	ENSAMXG00000033197	-	98	30.812	Astyanax_mexicanus
ENSLACG00000007830	-	95	30.124	ENSAMXG00000032571	-	53	30.124	Astyanax_mexicanus
ENSLACG00000007830	-	88	40.317	ENSAMXG00000035923	-	84	40.317	Astyanax_mexicanus
ENSLACG00000007830	-	89	34.957	ENSAMXG00000030022	-	56	34.957	Astyanax_mexicanus
ENSLACG00000007830	-	93	40.462	ENSAMXG00000034382	-	60	40.462	Astyanax_mexicanus
ENSLACG00000007830	-	90	42.988	ENSAMXG00000032559	-	59	42.988	Astyanax_mexicanus
ENSLACG00000007830	-	87	42.997	ENSAMXG00000038033	-	68	42.997	Astyanax_mexicanus
ENSLACG00000007830	-	95	30.315	ENSAMXG00000033912	-	62	30.315	Astyanax_mexicanus
ENSLACG00000007830	-	99	33.591	ENSAMXG00000039114	-	76	33.591	Astyanax_mexicanus
ENSLACG00000007830	-	57	30.283	ENSAMXG00000043469	-	97	30.283	Astyanax_mexicanus
ENSLACG00000007830	-	61	30.398	ENSCVAG00000019870	-	63	30.398	Cyprinodon_variegatus
ENSLACG00000007830	-	82	41.636	ENSCVAG00000020907	-	82	41.636	Cyprinodon_variegatus
ENSLACG00000007830	-	82	33.987	ENSGAFG00000014674	-	60	33.987	Gambusia_affinis
ENSLACG00000007830	-	85	35.244	ENSGAFG00000016352	-	51	35.244	Gambusia_affinis
ENSLACG00000007830	-	71	38.690	ENSGAGG00000002613	-	70	38.690	Gopherus_agassizii
ENSLACG00000007830	-	60	37.970	ENSGAGG00000007552	-	69	37.970	Gopherus_agassizii
ENSLACG00000007830	-	77	32.194	ENSHCOG00000012267	-	50	32.194	Hippocampus_comes
ENSLACG00000007830	-	89	41.212	ENSKMAG00000010491	-	50	41.212	Kryptolebias_marmoratus
ENSLACG00000007830	-	89	41.212	ENSKMAG00000003018	-	50	41.212	Kryptolebias_marmoratus
ENSLACG00000007830	-	89	41.212	ENSKMAG00000022204	-	50	41.212	Kryptolebias_marmoratus
ENSLACG00000007830	-	75	41.695	ENSMAMG00000021634	-	83	41.695	Mastacembelus_armatus
ENSLACG00000007830	-	83	53.052	ENSMZEG00005024252	-	75	53.052	Maylandia_zebra
ENSLACG00000007830	-	50	38.481	ENSMZEG00005008378	-	54	38.481	Maylandia_zebra
ENSLACG00000007830	-	90	41.718	ENSORLG00000023550	-	53	41.718	Oryzias_latipes
ENSLACG00000007830	-	95	31.593	ENSORLG00000029990	-	57	31.593	Oryzias_latipes
ENSLACG00000007830	-	81	35.736	ENSORLG00000029184	-	77	35.736	Oryzias_latipes
ENSLACG00000007830	-	83	35.135	ENSORLG00000025268	-	77	35.135	Oryzias_latipes
ENSLACG00000007830	-	91	32.022	ENSORLG00000027307	-	56	32.022	Oryzias_latipes
ENSLACG00000007830	-	86	32.812	ENSORLG00000025397	-	69	32.812	Oryzias_latipes
ENSLACG00000007830	-	68	32.665	ENSORLG00000024878	-	54	32.665	Oryzias_latipes
ENSLACG00000007830	-	95	31.723	ENSORLG00000022054	-	57	31.723	Oryzias_latipes
ENSLACG00000007830	-	93	33.708	ENSORLG00000025132	-	56	33.708	Oryzias_latipes
ENSLACG00000007830	-	96	30.260	ENSORLG00020007648	-	64	30.260	Oryzias_latipes_hni
ENSLACG00000007830	-	77	44.172	ENSORLG00020016695	-	77	44.172	Oryzias_latipes_hni
ENSLACG00000007830	-	78	33.989	ENSORLG00020017608	-	55	33.989	Oryzias_latipes_hni
ENSLACG00000007830	-	93	33.015	ENSORLG00020016398	-	58	33.015	Oryzias_latipes_hni
ENSLACG00000007830	-	91	39.697	ENSORLG00020016001	-	52	39.697	Oryzias_latipes_hni
ENSLACG00000007830	-	85	31.415	ENSORLG00020012971	-	52	31.415	Oryzias_latipes_hni
ENSLACG00000007830	-	93	33.427	ENSORLG00020015203	-	65	33.427	Oryzias_latipes_hni
ENSLACG00000007830	-	85	37.746	ENSORLG00020000868	-	51	37.746	Oryzias_latipes_hni
ENSLACG00000007830	-	74	38.961	ENSORLG00020018561	-	59	38.961	Oryzias_latipes_hni
ENSLACG00000007830	-	72	30.551	ENSORLG00020019030	-	67	30.551	Oryzias_latipes_hni
ENSLACG00000007830	-	91	31.742	ENSORLG00015018293	-	56	31.742	Oryzias_latipes_hsok
ENSLACG00000007830	-	89	44.172	ENSORLG00015000130	-	58	44.172	Oryzias_latipes_hsok
ENSLACG00000007830	-	100	33.291	ENSORLG00015022011	-	71	33.291	Oryzias_latipes_hsok
ENSLACG00000007830	-	55	37.920	ENSORLG00015013109	-	67	37.920	Oryzias_latipes_hsok
ENSLACG00000007830	-	96	30.526	ENSORLG00015012565	-	69	30.526	Oryzias_latipes_hsok
ENSLACG00000007830	-	93	33.146	ENSORLG00015017494	-	57	33.146	Oryzias_latipes_hsok
ENSLACG00000007830	-	90	41.104	ENSORLG00015008388	-	69	41.104	Oryzias_latipes_hsok
ENSLACG00000007830	-	76	34.097	ENSORLG00015000379	-	76	34.097	Oryzias_latipes_hsok
ENSLACG00000007830	-	98	37.856	ENSORLG00015022127	-	94	37.856	Oryzias_latipes_hsok
ENSLACG00000007830	-	85	37.135	ENSORLG00015001207	-	52	37.135	Oryzias_latipes_hsok
ENSLACG00000007830	-	100	39.516	ENSOMEG00000011191	-	52	39.516	Oryzias_melastigma
ENSLACG00000007830	-	100	33.680	ENSOMEG00000009707	-	60	33.680	Oryzias_melastigma
ENSLACG00000007830	-	56	40.673	ENSOMEG00000013479	-	69	40.673	Oryzias_melastigma
ENSLACG00000007830	-	96	32.306	ENSOMEG00000012600	-	89	32.306	Oryzias_melastigma
ENSLACG00000007830	-	89	33.811	ENSOMEG00000001995	-	57	33.811	Oryzias_melastigma
ENSLACG00000007830	-	88	32.964	ENSPKIG00000013624	-	58	32.964	Paramormyrops_kingsleyae
ENSLACG00000007830	-	94	32.821	ENSPKIG00000021090	-	82	32.821	Paramormyrops_kingsleyae
ENSLACG00000007830	-	60	31.087	ENSPKIG00000013778	-	57	31.087	Paramormyrops_kingsleyae
ENSLACG00000007830	-	86	30.501	ENSPKIG00000006845	-	67	30.501	Paramormyrops_kingsleyae
ENSLACG00000007830	-	88	39.763	ENSPKIG00000020388	-	51	39.763	Paramormyrops_kingsleyae
ENSLACG00000007830	-	85	44.147	ENSPKIG00000006120	-	70	44.147	Paramormyrops_kingsleyae
ENSLACG00000007830	-	83	39.118	ENSPKIG00000007924	-	65	39.118	Paramormyrops_kingsleyae
ENSLACG00000007830	-	85	35.574	ENSPKIG00000020363	-	55	35.574	Paramormyrops_kingsleyae
ENSLACG00000007830	-	99	32.250	ENSPKIG00000013293	-	71	32.250	Paramormyrops_kingsleyae
ENSLACG00000007830	-	66	35.692	ENSPSIG00000001150	-	65	35.692	Pelodiscus_sinensis
ENSLACG00000007830	-	67	39.241	ENSPSIG00000001614	-	71	39.241	Pelodiscus_sinensis
ENSLACG00000007830	-	100	30.186	ENSPMEG00000023031	-	71	30.186	Poecilia_mexicana
ENSLACG00000007830	-	55	30.140	ENSPMEG00000019465	-	95	30.140	Poecilia_mexicana
ENSLACG00000007830	-	87	36.735	ENSPREG00000006122	-	91	36.735	Poecilia_reticulata
ENSLACG00000007830	-	94	37.538	ENSPREG00000005134	-	56	37.538	Poecilia_reticulata
ENSLACG00000007830	-	64	33.704	ENSPREG00000006650	-	99	33.704	Poecilia_reticulata
ENSLACG00000007830	-	81	38.462	ENSPREG00000006052	-	55	38.462	Poecilia_reticulata
ENSLACG00000007830	-	51	30.649	ENSPNAG00000009058	-	76	30.649	Pygocentrus_nattereri
ENSLACG00000007830	-	90	32.955	ENSPNAG00000017165	-	51	32.955	Pygocentrus_nattereri
ENSLACG00000007830	-	100	30.429	ENSPNAG00000015770	-	62	30.429	Pygocentrus_nattereri
ENSLACG00000007830	-	87	38.310	ENSPNAG00000021509	-	66	38.310	Pygocentrus_nattereri
ENSLACG00000007830	-	100	34.620	ENSSDUG00000010009	-	77	34.620	Seriola_dumerili
ENSLACG00000007830	-	78	34.539	ENSSDUG00000010222	-	56	34.539	Seriola_dumerili
ENSLACG00000007830	-	93	42.690	ENSSLDG00000003503	-	65	42.690	Seriola_lalandi_dorsalis
ENSLACG00000007830	-	83	30.210	ENSTRUG00000021236	-	93	30.210	Takifugu_rubripes
ENSLACG00000007830	-	87	33.282	ENSTNIG00000006817	-	68	33.282	Tetraodon_nigroviridis
ENSLACG00000007830	-	87	31.183	ENSXMAG00000021440	-	52	31.183	Xiphophorus_maculatus
ENSLACG00000007830	-	99	31.742	ENSXMAG00000026865	-	60	31.742	Xiphophorus_maculatus
ENSLACG00000007830	-	95	31.062	ENSXMAG00000021686	-	55	31.062	Xiphophorus_maculatus
ENSLACG00000007830	-	85	34.097	ENSXMAG00000023370	-	59	34.097	Xiphophorus_maculatus
ENSLACG00000007830	-	94	30.952	ENSXMAG00000022159	-	62	30.952	Xiphophorus_maculatus
ENSLACG00000007830	-	95	31.193	ENSXMAG00000024126	-	55	31.193	Xiphophorus_maculatus
ENSLACG00000007830	-	95	31.291	ENSXMAG00000028850	-	56	31.291	Xiphophorus_maculatus
ENSLACG00000007830	-	95	31.291	ENSXMAG00000023206	-	56	31.291	Xiphophorus_maculatus
ENSLACG00000007830	-	79	30.583	ENSXMAG00000025551	-	54	30.583	Xiphophorus_maculatus
ENSLACG00000007830	-	89	31.186	ENSXMAG00000022790	-	52	31.186	Xiphophorus_maculatus
ENSLACG00000007830	-	100	30.897	ENSXMAG00000021174	-	62	30.897	Xiphophorus_maculatus
ENSLACG00000007830	-	69	32.134	ENSXMAG00000024180	-	52	32.134	Xiphophorus_maculatus
ENSLACG00000007830	-	68	34.097	ENSXMAG00000029360	-	54	34.097	Xiphophorus_maculatus
ENSLACG00000007830	-	94	31.186	ENSXMAG00000023476	-	52	31.186	Xiphophorus_maculatus
ENSLACG00000007830	-	95	31.291	ENSXMAG00000021696	-	56	31.291	Xiphophorus_maculatus
ENSLACG00000007830	-	64	31.873	ENSXMAG00000023507	-	96	31.873	Xiphophorus_maculatus